RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PHKG2P15735 406 aa24.01■■□□□ 1.43
CHMP4A-211ENST00000609024 ARHGAP27Q6ZUM4 889 aa24.01■■□□□ 1.43
CHMP4A-211ENST00000609024 EYA1Q99502 592 aa24.01■■□□□ 1.43
CHMP4A-211ENST00000609024 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
CHMP4A-211ENST00000609024 CCDC87Q9NVE4 849 aa24■■□□□ 1.43
CHMP4A-211ENST00000609024 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
CHMP4A-211ENST00000609024 TOMM70O94826 608 aa23.99■■□□□ 1.43
CHMP4A-211ENST00000609024 CARD14Q9BXL6 1004 aa23.99■■□□□ 1.43
CHMP4A-211ENST00000609024 ATG3Q9NT62 314 aa23.99■■□□□ 1.43
CHMP4A-211ENST00000609024 A0A0G2JLW4 131 aa23.98■■□□□ 1.43
CHMP4A-211ENST00000609024 PXDNLA1KZ92 1463 aa23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 FCHSD2O94868 740 aa23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 RFC4P35249 363 aa23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 PARP3Q9Y6F1 533 aa23.97■■□□□ 1.43
CHMP4A-211ENST00000609024 HSP90AB1P08238 724 aaKnown RBP23.96■■□□□ 1.43
CHMP4A-211ENST00000609024 ADRA2BP18089 450 aa23.96■■□□□ 1.43
CHMP4A-211ENST00000609024 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.43
CHMP4A-211ENST00000609024 ERVV-2B6SEH9 535 aa23.93■■□□□ 1.42
CHMP4A-211ENST00000609024 TNNT2P45379 298 aaPredicted RBP23.93■■□□□ 1.42
CHMP4A-211ENST00000609024 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
CHMP4A-211ENST00000609024 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
CHMP4A-211ENST00000609024 DPEP1P16444 411 aa23.92■■□□□ 1.42
CHMP4A-211ENST00000609024 RC3H1Q5TC82 1133 aaKnown RBP23.92■■□□□ 1.42
CHMP4A-211ENST00000609024 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
CHMP4A-211ENST00000609024 POLKQ9UBT6 870 aa23.92■■□□□ 1.42
CHMP4A-211ENST00000609024 ANKRD26Q9UPS8 1709 aa23.92■■□□□ 1.42
CHMP4A-211ENST00000609024 PLEKHO1Q53GL0 409 aaPredicted RBP23.91■■□□□ 1.42
CHMP4A-211ENST00000609024 DCAF5Q96JK2 942 aa23.91■■□□□ 1.42
CHMP4A-211ENST00000609024 C10orf71Q711Q0 1435 aa23.91■■□□□ 1.42
CHMP4A-211ENST00000609024 KIF13BQ9NQT8 1826 aa23.91■■□□□ 1.42
CHMP4A-211ENST00000609024 CABP4P57796 275 aa23.9■■□□□ 1.42
CHMP4A-211ENST00000609024 EIF4A2Q14240 407 aaKnown RBP23.9■■□□□ 1.42
CHMP4A-211ENST00000609024 CNTNAP4Q9C0A0 1308 aa23.89■■□□□ 1.42
CHMP4A-211ENST00000609024 RPS6KA4O75676 772 aa23.89■■□□□ 1.41
CHMP4A-211ENST00000609024 NMRK2Q9NPI5 230 aa23.89■■□□□ 1.41
CHMP4A-211ENST00000609024 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.41
CHMP4A-211ENST00000609024 GYS1P13807 737 aa23.88■■□□□ 1.41
CHMP4A-211ENST00000609024 PIM2Q9P1W9 311 aa23.88■■□□□ 1.41
CHMP4A-211ENST00000609024 KDRP35968 1356 aa23.88■■□□□ 1.41
CHMP4A-211ENST00000609024 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
CHMP4A-211ENST00000609024 C4AP0C0L4 1744 aa23.87■■□□□ 1.41
CHMP4A-211ENST00000609024 KDM2BQ8NHM5 1336 aa23.86■■□□□ 1.41
CHMP4A-211ENST00000609024 C1orf141Q5JVX7 400 aa23.86■■□□□ 1.41
CHMP4A-211ENST00000609024 ZNF530Q6P9A1 599 aaPredicted RBP23.86■■□□□ 1.41
CHMP4A-211ENST00000609024 RBM46Q8TBY0 533 aaKnown RBP23.86■■□□□ 1.41
CHMP4A-211ENST00000609024 AMOTQ4VCS5 1084 aa23.85■■□□□ 1.41
CHMP4A-211ENST00000609024 DALRD3Q5D0E6 543 aaKnown RBP23.85■■□□□ 1.41
CHMP4A-211ENST00000609024 SLC4A9Q96Q91 983 aa23.85■■□□□ 1.41
CHMP4A-211ENST00000609024 PTCD1O75127 700 aaKnown RBP23.84■■□□□ 1.41
CHMP4A-211ENST00000609024 MTHFSP49914 203 aa23.84■■□□□ 1.41
CHMP4A-211ENST00000609024 KIAA1551Q9HCM1 1747 aa23.84■■□□□ 1.41
CHMP4A-211ENST00000609024 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.41
CHMP4A-211ENST00000609024 DNAJC5GQ8N7S2 189 aa23.83■■□□□ 1.41
CHMP4A-211ENST00000609024 RNF181Q9P0P0 153 aa23.81■■□□□ 1.4
CHMP4A-211ENST00000609024 COL5A3P25940 1745 aaPredicted RBP23.81■■□□□ 1.4
CHMP4A-211ENST00000609024 CRKLP46109 303 aaKnown RBP23.8■■□□□ 1.4
CHMP4A-211ENST00000609024 FSTL1Q12841 308 aa23.8■■□□□ 1.4
CHMP4A-211ENST00000609024 KCNA3P22001 575 aa23.78■■□□□ 1.4
CHMP4A-211ENST00000609024 WDR90Q96KV7 1748 aa23.78■■□□□ 1.4
CHMP4A-211ENST00000609024 ARFGEF1Q9Y6D6 1849 aa23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 ZPR1O75312 459 aa23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 NFATC2IPQ8NCF5 419 aa23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 KLRG1Q96E93 195 aa23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 BRCA1P38398 1863 aaKnown RBP23.77■■□□□ 1.4
CHMP4A-211ENST00000609024 FKBP8Q14318 412 aa23.76■■□□□ 1.39
CHMP4A-211ENST00000609024 RRAGCQ9HB90 399 aa23.76■■□□□ 1.39
CHMP4A-211ENST00000609024 USP42Q9H9J4 1324 aaKnown RBP23.76■■□□□ 1.39
CHMP4A-211ENST00000609024 KDM6AO15550 1401 aaPredicted RBP23.76■■□□□ 1.39
CHMP4A-211ENST00000609024 KCPQ6ZWJ8 1503 aa23.75■■□□□ 1.39
CHMP4A-211ENST00000609024 CHRNA5P30532 468 aa23.74■■□□□ 1.39
CHMP4A-211ENST00000609024 HTRA3P83110 453 aa23.73■■□□□ 1.39
CHMP4A-211ENST00000609024 DDR1Q08345 913 aa23.73■■□□□ 1.39
CHMP4A-211ENST00000609024 SMC1BQ8NDV3 1235 aa23.73■■□□□ 1.39
CHMP4A-211ENST00000609024 MYH14Q7Z406 1995 aaKnown RBP23.72■■□□□ 1.39
CHMP4A-211ENST00000609024 MORC1Q86VD1 984 aa23.72■■□□□ 1.39
CHMP4A-211ENST00000609024 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
CHMP4A-211ENST00000609024 SULT6B1Q6IMI4 303 aa23.71■■□□□ 1.39
CHMP4A-211ENST00000609024 AEBP1Q8IUX7 1158 aa23.7■■□□□ 1.38
CHMP4A-211ENST00000609024 PANK3Q9H999 370 aa23.7■■□□□ 1.38
CHMP4A-211ENST00000609024 POLRMTO00411 1230 aaKnown RBP23.69■■□□□ 1.38
CHMP4A-211ENST00000609024 USPL1Q5W0Q7 1092 aa23.69■■□□□ 1.38
CHMP4A-211ENST00000609024 TNRC6CQ9HCJ0 1690 aaKnown RBP23.68■■□□□ 1.38
CHMP4A-211ENST00000609024 JMYQ8N9B5 988 aa23.68■■□□□ 1.38
CHMP4A-211ENST00000609024 TM4SF1P30408 202 aa23.67■■□□□ 1.38
CHMP4A-211ENST00000609024 INTS5Q6P9B9 1019 aaKnown RBP23.67■■□□□ 1.38
CHMP4A-211ENST00000609024 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
CHMP4A-211ENST00000609024 CAPN15O75808 1086 aa23.66■■□□□ 1.38
CHMP4A-211ENST00000609024 DNAJC10Q8IXB1 793 aa23.66■■□□□ 1.38
CHMP4A-211ENST00000609024 AKAP4Q5JQC9 854 aa23.65■■□□□ 1.38
CHMP4A-211ENST00000609024 COL13A1Q5TAT6 717 aaPredicted RBP23.65■■□□□ 1.38
CHMP4A-211ENST00000609024 TJP1Q07157 1748 aa23.64■■□□□ 1.38
CHMP4A-211ENST00000609024 VEGFAP15692 232 aaPredicted RBP23.64■■□□□ 1.37
CHMP4A-211ENST00000609024 LMNB1P20700 586 aa23.64■■□□□ 1.37
CHMP4A-211ENST00000609024 RASSF7Q02833 373 aa23.64■■□□□ 1.37
CHMP4A-211ENST00000609024 TNS4Q8IZW8 715 aa23.64■■□□□ 1.37
CHMP4A-211ENST00000609024 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHMP4A-211ENST00000609024 TRIM26Q12899 539 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms