RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
LINC00343-212ENST00000608624 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00343-212ENST00000608624 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
LINC00343-212ENST00000608624 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
LINC00343-212ENST00000608624 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
LINC00343-212ENST00000608624 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
LINC00343-212ENST00000608624 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
LINC00343-212ENST00000608624 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
LINC00343-212ENST00000608624 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
LINC00343-212ENST00000608624 ST18O60284 1047 aa12.09□□□□□ -0.47
LINC00343-212ENST00000608624 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
LINC00343-212ENST00000608624 MIER1Q8N108 512 aa12.09□□□□□ -0.47
LINC00343-212ENST00000608624 ZCRB1Q8TBF4 217 aaKnown RBP12.09□□□□□ -0.47
LINC00343-212ENST00000608624 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
LINC00343-212ENST00000608624 EXOC5O00471 708 aa12.08□□□□□ -0.48
LINC00343-212ENST00000608624 TIE1P35590 1138 aa12.08□□□□□ -0.48
LINC00343-212ENST00000608624 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
LINC00343-212ENST00000608624 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
LINC00343-212ENST00000608624 ACSBG1Q96GR2 724 aa12.08□□□□□ -0.48
LINC00343-212ENST00000608624 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-212ENST00000608624 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
LINC00343-212ENST00000608624 KCNQ2O43526 872 aa12.07□□□□□ -0.48
LINC00343-212ENST00000608624 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
LINC00343-212ENST00000608624 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-212ENST00000608624 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
LINC00343-212ENST00000608624 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
LINC00343-212ENST00000608624 ADAMTS8Q9UP79 889 aa12.07□□□□□ -0.48
LINC00343-212ENST00000608624 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
LINC00343-212ENST00000608624 PHKG2P15735 406 aa12.06□□□□□ -0.48
LINC00343-212ENST00000608624 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
LINC00343-212ENST00000608624 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
LINC00343-212ENST00000608624 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
LINC00343-212ENST00000608624 BTAF1O14981 1849 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 MAP3K13O43283 966 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 TRIM37O94972 964 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
LINC00343-212ENST00000608624 ITGB4P16144 1822 aa12.04□□□□□ -0.48
LINC00343-212ENST00000608624 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
LINC00343-212ENST00000608624 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
LINC00343-212ENST00000608624 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00343-212ENST00000608624 BCL9O00512 1426 aa12.03□□□□□ -0.48
LINC00343-212ENST00000608624 SCN11AQ9UI33 1791 aa12.03□□□□□ -0.48
LINC00343-212ENST00000608624 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
LINC00343-212ENST00000608624 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00343-212ENST00000608624 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
LINC00343-212ENST00000608624 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
LINC00343-212ENST00000608624 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
LINC00343-212ENST00000608624 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
LINC00343-212ENST00000608624 FCHSD2O94868 740 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 LGR6Q9HBX8 967 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00343-212ENST00000608624 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 MRC1P22897 1456 aa12.02□□□□□ -0.49
LINC00343-212ENST00000608624 SEC24BO95487 1268 aa12.01□□□□□ -0.49
LINC00343-212ENST00000608624 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
LINC00343-212ENST00000608624 DCTN1Q14203 1278 aa12.01□□□□□ -0.49
LINC00343-212ENST00000608624 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
LINC00343-212ENST00000608624 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
LINC00343-212ENST00000608624 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
LINC00343-212ENST00000608624 AMOTQ4VCS5 1084 aa12□□□□□ -0.49
LINC00343-212ENST00000608624 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
LINC00343-212ENST00000608624 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
LINC00343-212ENST00000608624 SOCS7O14512 581 aa11.99□□□□□ -0.49
LINC00343-212ENST00000608624 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
LINC00343-212ENST00000608624 C1orf141Q5JVX7 400 aa11.99□□□□□ -0.49
LINC00343-212ENST00000608624 MCM10Q7L590 875 aa11.99□□□□□ -0.49
LINC00343-212ENST00000608624 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
LINC00343-212ENST00000608624 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-212ENST00000608624 PAPPAQ13219 1627 aa11.98□□□□□ -0.49
LINC00343-212ENST00000608624 RNMTO43148 476 aaKnown RBP11.98□□□□□ -0.49
LINC00343-212ENST00000608624 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
LINC00343-212ENST00000608624 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
LINC00343-212ENST00000608624 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
LINC00343-212ENST00000608624 PIGBQ92521 554 aa11.98□□□□□ -0.49
LINC00343-212ENST00000608624 KCNQ4P56696 695 aa11.97□□□□□ -0.49
LINC00343-212ENST00000608624 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-212ENST00000608624 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
LINC00343-212ENST00000608624 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
LINC00343-212ENST00000608624 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
LINC00343-212ENST00000608624 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-212ENST00000608624 RREB1Q92766 1687 aa11.97□□□□□ -0.49
LINC00343-212ENST00000608624 CEMIPQ8WUJ3 1361 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 CCER2I3L3R5 266 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 APAF1O14727 1248 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 APBA3O96018 575 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.49
LINC00343-212ENST00000608624 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.49
LINC00343-212ENST00000608624 LY75O60449 1722 aa11.95□□□□□ -0.5
LINC00343-212ENST00000608624 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
LINC00343-212ENST00000608624 PROM2Q8N271 834 aa11.95□□□□□ -0.5
LINC00343-212ENST00000608624 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
LINC00343-212ENST00000608624 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms