RNA–Protein interactions for RNA: ENST00000608484.1

AP004247.4-201, humanhuman

BASIC

Gene AP004247.4, Length 942 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.4-201ENST00000608484 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 ST20-MTHFSA0A0A6YYL1 179 aa11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 GNPATO15228 680 aa11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 KCNA3P22001 575 aa11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 PCGF6Q9BYE7 350 aa11.2□□□□□ -0.62
AP004247.4-201ENST00000608484 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
AP004247.4-201ENST00000608484 DPEP1P16444 411 aa11.19□□□□□ -0.62
AP004247.4-201ENST00000608484 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
AP004247.4-201ENST00000608484 KIF20BQ96Q89 1820 aa11.19□□□□□ -0.62
AP004247.4-201ENST00000608484 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 FLT4P35916 1363 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 FCHSD2O94868 740 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 TMF1P82094 1093 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 FSTL1Q12841 308 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 TRAPPC3LQ5T215 181 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 NLGN1Q8N2Q7 840 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 C10orf71Q711Q0 1435 aa11.18□□□□□ -0.62
AP004247.4-201ENST00000608484 PCNTO95613 3336 aa11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
AP004247.4-201ENST00000608484 COL5A3P25940 1745 aaPredicted RBP11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 SLC24A1O60721 1099 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 CAPN15O75808 1086 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 GYS1P13807 737 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 PRELPP51888 382 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 TRIM26Q12899 539 aaPredicted RBP11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
AP004247.4-201ENST00000608484 KCPQ6ZWJ8 1503 aa11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 PHKG2P15735 406 aa11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 C16orf71Q8IYS4 520 aaPredicted RBP11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 IFNL2Q8IZJ0 200 aa11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 EYA1Q99502 592 aa11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
AP004247.4-201ENST00000608484 RPS6KA4O75676 772 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 ADRA2BP18089 450 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 PARP3Q9Y6F1 533 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 KDRP35968 1356 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
AP004247.4-201ENST00000608484 KDM2BQ8NHM5 1336 aa11.13□□□□□ -0.63
AP004247.4-201ENST00000608484 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
AP004247.4-201ENST00000608484 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
AP004247.4-201ENST00000608484 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
AP004247.4-201ENST00000608484 RFC4P35249 363 aa11.12□□□□□ -0.63
AP004247.4-201ENST00000608484 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
AP004247.4-201ENST00000608484 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
AP004247.4-201ENST00000608484 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
AP004247.4-201ENST00000608484 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
AP004247.4-201ENST00000608484 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
AP004247.4-201ENST00000608484 PPM1GO15355 546 aaPredicted RBP11.1□□□□□ -0.63
AP004247.4-201ENST00000608484 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
AP004247.4-201ENST00000608484 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 TM4SF1P30408 202 aa11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 CHRNA5P30532 468 aa11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 DDR1Q08345 913 aa11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 FKBP8Q14318 412 aa11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 POLKQ9UBT6 870 aa11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
AP004247.4-201ENST00000608484 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
AP004247.4-201ENST00000608484 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
AP004247.4-201ENST00000608484 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
AP004247.4-201ENST00000608484 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
AP004247.4-201ENST00000608484 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
AP004247.4-201ENST00000608484 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
AP004247.4-201ENST00000608484 DICER1Q9UPY3 1922 aaKnown RBP11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 GLTPD2A6NH11 291 aa11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 POTECB2RU33 542 aa11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 POLRMTO00411 1230 aaKnown RBP11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 VEGFAP15692 232 aaPredicted RBP11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 TJP1Q07157 1748 aa11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
AP004247.4-201ENST00000608484 DLEC1Q9Y238 1755 aa11.05□□□□□ -0.64
AP004247.4-201ENST00000608484 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
AP004247.4-201ENST00000608484 CABP4P57796 275 aa11.05□□□□□ -0.64
AP004247.4-201ENST00000608484 RASSF7Q02833 373 aa11.05□□□□□ -0.64
AP004247.4-201ENST00000608484 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
AP004247.4-201ENST00000608484 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
AP004247.4-201ENST00000608484 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
AP004247.4-201ENST00000608484 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
AP004247.4-201ENST00000608484 LMNB1P20700 586 aa11.03□□□□□ -0.64
AP004247.4-201ENST00000608484 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
AP004247.4-201ENST00000608484 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
AP004247.4-201ENST00000608484 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms