RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
LINC01954-201ENST00000607419 MIER1Q8N108 512 aa13.89□□□□□ -0.19
LINC01954-201ENST00000607419 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
LINC01954-201ENST00000607419 AMPHP49418 695 aa13.88□□□□□ -0.19
LINC01954-201ENST00000607419 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
LINC01954-201ENST00000607419 FLT4P35916 1363 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 MEGF6O75095 1541 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 CCER2I3L3R5 266 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 HTRA3P83110 453 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 IP6K1Q92551 441 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
LINC01954-201ENST00000607419 INSRP06213 1382 aa13.86□□□□□ -0.19
LINC01954-201ENST00000607419 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
LINC01954-201ENST00000607419 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
LINC01954-201ENST00000607419 HOXC9P31274 260 aa13.85□□□□□ -0.19
LINC01954-201ENST00000607419 ZCRB1Q8TBF4 217 aaKnown RBP13.85□□□□□ -0.19
LINC01954-201ENST00000607419 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
LINC01954-201ENST00000607419 BRCA1P38398 1863 aaKnown RBP13.83□□□□□ -0.2
LINC01954-201ENST00000607419 CAPN15O75808 1086 aa13.83□□□□□ -0.2
LINC01954-201ENST00000607419 APLP1P51693 650 aa13.83□□□□□ -0.2
LINC01954-201ENST00000607419 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
LINC01954-201ENST00000607419 MRS2Q9HD23 443 aa13.83□□□□□ -0.2
LINC01954-201ENST00000607419 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
LINC01954-201ENST00000607419 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
LINC01954-201ENST00000607419 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
LINC01954-201ENST00000607419 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
LINC01954-201ENST00000607419 DIAPH1O60610 1272 aaKnown RBP13.81□□□□□ -0.2
LINC01954-201ENST00000607419 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
LINC01954-201ENST00000607419 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
LINC01954-201ENST00000607419 TOMM70O94826 608 aa13.8□□□□□ -0.2
LINC01954-201ENST00000607419 NUDCQ9Y266 331 aa13.8□□□□□ -0.2
LINC01954-201ENST00000607419 SBF1O95248 1867 aa13.8□□□□□ -0.2
LINC01954-201ENST00000607419 IL13P35225 146 aa13.79□□□□□ -0.2
LINC01954-201ENST00000607419 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
LINC01954-201ENST00000607419 PHF14O94880 888 aa13.78□□□□□ -0.2
LINC01954-201ENST00000607419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
LINC01954-201ENST00000607419 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
LINC01954-201ENST00000607419 JMYQ8N9B5 988 aa13.77□□□□□ -0.21
LINC01954-201ENST00000607419 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
LINC01954-201ENST00000607419 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
LINC01954-201ENST00000607419 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
LINC01954-201ENST00000607419 WDR43Q15061 677 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01954-201ENST00000607419 LINC00116Q8NCU8 138 aa13.76□□□□□ -0.21
LINC01954-201ENST00000607419 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
LINC01954-201ENST00000607419 KLRG1Q96E93 195 aa13.76□□□□□ -0.21
LINC01954-201ENST00000607419 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
LINC01954-201ENST00000607419 A0A0G2JLW4 131 aa13.75□□□□□ -0.21
LINC01954-201ENST00000607419 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
LINC01954-201ENST00000607419 CYP27B1O15528 508 aa13.75□□□□□ -0.21
LINC01954-201ENST00000607419 PKD1L3Q7Z443 1732 aa13.75□□□□□ -0.21
LINC01954-201ENST00000607419 CCDC88AQ3V6T2 1871 aa13.74□□□□□ -0.21
LINC01954-201ENST00000607419 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
LINC01954-201ENST00000607419 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
LINC01954-201ENST00000607419 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC01954-201ENST00000607419 PIGBQ92521 554 aa13.74□□□□□ -0.21
LINC01954-201ENST00000607419 EYA1Q99502 592 aa13.74□□□□□ -0.21
LINC01954-201ENST00000607419 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
LINC01954-201ENST00000607419 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
LINC01954-201ENST00000607419 ITPK1Q13572 414 aa13.73□□□□□ -0.21
LINC01954-201ENST00000607419 AK7Q96M32 723 aa13.73□□□□□ -0.21
LINC01954-201ENST00000607419 KCNA3P22001 575 aa13.72□□□□□ -0.21
LINC01954-201ENST00000607419 PRELPP51888 382 aa13.72□□□□□ -0.21
LINC01954-201ENST00000607419 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
LINC01954-201ENST00000607419 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
LINC01954-201ENST00000607419 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
LINC01954-201ENST00000607419 BCS1LQ9Y276 419 aa13.72□□□□□ -0.21
LINC01954-201ENST00000607419 MYH14Q7Z406 1995 aaKnown RBP13.72□□□□□ -0.21
LINC01954-201ENST00000607419 KDRP35968 1356 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 FCHSD2O94868 740 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 SULT6B1Q6IMI4 303 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 ADAMTS8Q9UP79 889 aa13.71□□□□□ -0.21
LINC01954-201ENST00000607419 KCPQ6ZWJ8 1503 aa13.7□□□□□ -0.22
LINC01954-201ENST00000607419 MMP10P09238 476 aa13.7□□□□□ -0.22
LINC01954-201ENST00000607419 DPEP1P16444 411 aa13.7□□□□□ -0.22
LINC01954-201ENST00000607419 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
LINC01954-201ENST00000607419 ASAP1Q9ULH1 1129 aa13.7□□□□□ -0.22
LINC01954-201ENST00000607419 HMOX1P09601 288 aa13.69□□□□□ -0.22
LINC01954-201ENST00000607419 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
LINC01954-201ENST00000607419 SSFA2P28290 1259 aa13.69□□□□□ -0.22
LINC01954-201ENST00000607419 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
LINC01954-201ENST00000607419 RRAGCQ9HB90 399 aa13.69□□□□□ -0.22
LINC01954-201ENST00000607419 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
LINC01954-201ENST00000607419 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 SIK1P57059 783 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 C9orf131Q5VYM1 1079 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
LINC01954-201ENST00000607419 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
LINC01954-201ENST00000607419 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
LINC01954-201ENST00000607419 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
LINC01954-201ENST00000607419 NEFMP07197 916 aa13.67□□□□□ -0.22
LINC01954-201ENST00000607419 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
LINC01954-201ENST00000607419 TGFB2P61812 414 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms