RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
CTSA-216ENST00000607212 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
CTSA-216ENST00000607212 ITPK1Q13572 414 aa20.36■□□□□ 0.85
CTSA-216ENST00000607212 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
CTSA-216ENST00000607212 MORC1Q86VD1 984 aa20.36■□□□□ 0.85
CTSA-216ENST00000607212 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
CTSA-216ENST00000607212 ATG3Q9NT62 314 aa20.35■□□□□ 0.85
CTSA-216ENST00000607212 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
CTSA-216ENST00000607212 ZNF526Q8TF50 670 aaPredicted RBP20.34■□□□□ 0.85
CTSA-216ENST00000607212 ATP10DQ9P241 1426 aa20.34■□□□□ 0.85
CTSA-216ENST00000607212 CABP4P57796 275 aa20.33■□□□□ 0.85
CTSA-216ENST00000607212 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
CTSA-216ENST00000607212 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
CTSA-216ENST00000607212 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
CTSA-216ENST00000607212 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
CTSA-216ENST00000607212 GPBP1L1Q9HC44 474 aaPredicted RBP20.32■□□□□ 0.84
CTSA-216ENST00000607212 ERVV-2B6SEH9 535 aa20.31■□□□□ 0.84
CTSA-216ENST00000607212 MMP10P09238 476 aa20.31■□□□□ 0.84
CTSA-216ENST00000607212 MTHFSP49914 203 aa20.3■□□□□ 0.84
CTSA-216ENST00000607212 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
CTSA-216ENST00000607212 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
CTSA-216ENST00000607212 RFC4P35249 363 aa20.28■□□□□ 0.84
CTSA-216ENST00000607212 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
CTSA-216ENST00000607212 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.84
CTSA-216ENST00000607212 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
CTSA-216ENST00000607212 KDRP35968 1356 aa20.26■□□□□ 0.83
CTSA-216ENST00000607212 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
CTSA-216ENST00000607212 NLGN1Q8N2Q7 840 aa20.26■□□□□ 0.83
CTSA-216ENST00000607212 CICQ96RK0 1608 aaPredicted RBP20.26■□□□□ 0.83
CTSA-216ENST00000607212 ARHGEF1Q92888 912 aaKnown RBP20.25■□□□□ 0.83
CTSA-216ENST00000607212 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
CTSA-216ENST00000607212 PARP3Q9Y6F1 533 aa20.25■□□□□ 0.83
CTSA-216ENST00000607212 N4BP2Q86UW6 1770 aaPredicted RBP20.25■□□□□ 0.83
CTSA-216ENST00000607212 KDM6AO15550 1401 aaPredicted RBP20.25■□□□□ 0.83
CTSA-216ENST00000607212 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
CTSA-216ENST00000607212 BCS1LQ9Y276 419 aa20.24■□□□□ 0.83
CTSA-216ENST00000607212 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
CTSA-216ENST00000607212 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
CTSA-216ENST00000607212 ADRA2BP18089 450 aa20.23■□□□□ 0.83
CTSA-216ENST00000607212 RC3H1Q5TC82 1133 aaKnown RBP20.23■□□□□ 0.83
CTSA-216ENST00000607212 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
CTSA-216ENST00000607212 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
CTSA-216ENST00000607212 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
CTSA-216ENST00000607212 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
CTSA-216ENST00000607212 A0A0G2JLW4 131 aa20.21■□□□□ 0.83
CTSA-216ENST00000607212 C4AP0C0L4 1744 aa20.2■□□□□ 0.82
CTSA-216ENST00000607212 TGFB2P61812 414 aa20.2■□□□□ 0.82
CTSA-216ENST00000607212 ADCY9O60503 1353 aa20.2■□□□□ 0.82
CTSA-216ENST00000607212 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
CTSA-216ENST00000607212 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
CTSA-216ENST00000607212 KIF13BQ9NQT8 1826 aa20.19■□□□□ 0.82
CTSA-216ENST00000607212 FCHSD2O94868 740 aa20.19■□□□□ 0.82
CTSA-216ENST00000607212 GYS1P13807 737 aa20.19■□□□□ 0.82
CTSA-216ENST00000607212 CRKLP46109 303 aaKnown RBP20.19■□□□□ 0.82
CTSA-216ENST00000607212 ARHGAP27Q6ZUM4 889 aa20.19■□□□□ 0.82
CTSA-216ENST00000607212 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
CTSA-216ENST00000607212 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
CTSA-216ENST00000607212 HMOX1P09601 288 aa20.17■□□□□ 0.82
CTSA-216ENST00000607212 DPEP1P16444 411 aa20.17■□□□□ 0.82
CTSA-216ENST00000607212 IL13P35225 146 aa20.17■□□□□ 0.82
CTSA-216ENST00000607212 SRP68Q9UHB9 627 aaKnown RBP20.17■□□□□ 0.82
CTSA-216ENST00000607212 C10orf71Q711Q0 1435 aa20.17■□□□□ 0.82
CTSA-216ENST00000607212 AKAP4Q5JQC9 854 aa20.16■□□□□ 0.82
CTSA-216ENST00000607212 TJP1Q07157 1748 aa20.15■□□□□ 0.82
CTSA-216ENST00000607212 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
CTSA-216ENST00000607212 KIAA1551Q9HCM1 1747 aa20.14■□□□□ 0.81
CTSA-216ENST00000607212 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
CTSA-216ENST00000607212 KIF7Q2M1P5 1343 aa20.13■□□□□ 0.81
CTSA-216ENST00000607212 ZPR1O75312 459 aa20.13■□□□□ 0.81
CTSA-216ENST00000607212 HSPA6P17066 643 aa20.12■□□□□ 0.81
CTSA-216ENST00000607212 FKBP8Q14318 412 aa20.12■□□□□ 0.81
CTSA-216ENST00000607212 AMER1Q5JTC6 1135 aaPredicted RBP20.12■□□□□ 0.81
CTSA-216ENST00000607212 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
CTSA-216ENST00000607212 SLC52A2Q9HAB3 445 aa20.12■□□□□ 0.81
CTSA-216ENST00000607212 USP42Q9H9J4 1324 aaKnown RBP20.11■□□□□ 0.81
CTSA-216ENST00000607212 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
CTSA-216ENST00000607212 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
CTSA-216ENST00000607212 PIM2Q9P1W9 311 aa20.11■□□□□ 0.81
CTSA-216ENST00000607212 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
CTSA-216ENST00000607212 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
CTSA-216ENST00000607212 DALRD3Q5D0E6 543 aaKnown RBP20.09■□□□□ 0.81
CTSA-216ENST00000607212 USPL1Q5W0Q7 1092 aa20.09■□□□□ 0.81
CTSA-216ENST00000607212 BRCA1P38398 1863 aaKnown RBP20.09■□□□□ 0.81
CTSA-216ENST00000607212 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
CTSA-216ENST00000607212 ARFGEF1Q9Y6D6 1849 aa20.08■□□□□ 0.8
CTSA-216ENST00000607212 KIF3CO14782 793 aa20.07■□□□□ 0.8
CTSA-216ENST00000607212 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
CTSA-216ENST00000607212 DDR1Q08345 913 aa20.07■□□□□ 0.8
CTSA-216ENST00000607212 MTHFSDQ2M296 383 aaKnown RBP20.07■□□□□ 0.8
CTSA-216ENST00000607212 C9orf131Q5VYM1 1079 aa20.07■□□□□ 0.8
CTSA-216ENST00000607212 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
CTSA-216ENST00000607212 CHRNA5P30532 468 aa20.06■□□□□ 0.8
CTSA-216ENST00000607212 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
CTSA-216ENST00000607212 SOS1Q07889 1333 aaPredicted RBP20.04■□□□□ 0.8
CTSA-216ENST00000607212 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
CTSA-216ENST00000607212 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
CTSA-216ENST00000607212 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
CTSA-216ENST00000607212 COL15A1P39059 1388 aa20.04■□□□□ 0.8
CTSA-216ENST00000607212 KCNA3P22001 575 aa20.03■□□□□ 0.8
CTSA-216ENST00000607212 NMRK2Q9NPI5 230 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms