RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 SLC4A9Q96Q91 983 aa29.89■■■□□ 2.38
TMEM248-207ENST00000607045 CHD4Q14839 1912 aa29.88■■■□□ 2.37
TMEM248-207ENST00000607045 SSFA2P28290 1259 aa29.88■■■□□ 2.37
TMEM248-207ENST00000607045 GNPATO15228 680 aa29.87■■■□□ 2.37
TMEM248-207ENST00000607045 ZNF530Q6P9A1 599 aaPredicted RBP29.87■■■□□ 2.37
TMEM248-207ENST00000607045 DCAF5Q96JK2 942 aa29.87■■■□□ 2.37
TMEM248-207ENST00000607045 GRIN3BO60391 1043 aa29.85■■■□□ 2.37
TMEM248-207ENST00000607045 AMOTQ4VCS5 1084 aa29.85■■■□□ 2.37
TMEM248-207ENST00000607045 SULT6B1Q6IMI4 303 aa29.85■■■□□ 2.37
TMEM248-207ENST00000607045 RBM42Q9BTD8 480 aaKnown RBP29.85■■■□□ 2.37
TMEM248-207ENST00000607045 HSP90AB1P08238 724 aaKnown RBP29.84■■■□□ 2.37
TMEM248-207ENST00000607045 IL13P35225 146 aa29.84■■■□□ 2.37
TMEM248-207ENST00000607045 AMER1Q5JTC6 1135 aaPredicted RBP29.84■■■□□ 2.37
TMEM248-207ENST00000607045 MTHFSP49914 203 aa29.82■■■□□ 2.36
TMEM248-207ENST00000607045 CABP4P57796 275 aa29.82■■■□□ 2.36
TMEM248-207ENST00000607045 PLEKHG2Q9H7P9 1386 aa29.81■■■□□ 2.36
TMEM248-207ENST00000607045 KIF7Q2M1P5 1343 aa29.81■■■□□ 2.36
TMEM248-207ENST00000607045 UBR3Q6ZT12 1888 aa29.8■■■□□ 2.36
TMEM248-207ENST00000607045 NFATC2IPQ8NCF5 419 aa29.79■■■□□ 2.36
TMEM248-207ENST00000607045 WWC3Q9ULE0 1092 aa29.79■■■□□ 2.36
TMEM248-207ENST00000607045 KDM6AO15550 1401 aaPredicted RBP29.79■■■□□ 2.36
TMEM248-207ENST00000607045 TRAPPC3LQ5T215 181 aa29.78■■■□□ 2.36
TMEM248-207ENST00000607045 C1orf141Q5JVX7 400 aa29.77■■■□□ 2.36
TMEM248-207ENST00000607045 RTCBQ9Y3I0 505 aaKnown RBP29.77■■■□□ 2.36
TMEM248-207ENST00000607045 KDRP35968 1356 aa29.77■■■□□ 2.36
TMEM248-207ENST00000607045 PER1O15534 1290 aaPredicted RBP29.76■■■□□ 2.35
TMEM248-207ENST00000607045 PTCD1O75127 700 aaKnown RBP29.75■■■□□ 2.35
TMEM248-207ENST00000607045 C1QTNF8P60827 252 aa29.75■■■□□ 2.35
TMEM248-207ENST00000607045 RC3H1Q5TC82 1133 aaKnown RBP29.75■■■□□ 2.35
TMEM248-207ENST00000607045 ARHGEF1Q92888 912 aaKnown RBP29.75■■■□□ 2.35
TMEM248-207ENST00000607045 MMP10P09238 476 aa29.74■■■□□ 2.35
TMEM248-207ENST00000607045 RPS6KA4O75676 772 aa29.71■■■□□ 2.35
TMEM248-207ENST00000607045 CC2D1BQ5T0F9 858 aaKnown RBP29.71■■■□□ 2.35
TMEM248-207ENST00000607045 LGR6Q9HBX8 967 aa29.7■■■□□ 2.35
TMEM248-207ENST00000607045 HMOX1P09601 288 aa29.69■■■□□ 2.34
TMEM248-207ENST00000607045 NLGN1Q8N2Q7 840 aa29.69■■■□□ 2.34
TMEM248-207ENST00000607045 CNTNAP4Q9C0A0 1308 aa29.68■■■□□ 2.34
TMEM248-207ENST00000607045 GIGYF1O75420 1035 aaPredicted RBP29.67■■■□□ 2.34
TMEM248-207ENST00000607045 RFC4P35249 363 aa29.67■■■□□ 2.34
TMEM248-207ENST00000607045 GYS1P13807 737 aa29.66■■■□□ 2.34
TMEM248-207ENST00000607045 CNGB1Q14028 1251 aaPredicted RBP29.66■■■□□ 2.34
TMEM248-207ENST00000607045 AKAP4Q5JQC9 854 aa29.66■■■□□ 2.34
TMEM248-207ENST00000607045 ADRA2BP18089 450 aa29.65■■■□□ 2.34
TMEM248-207ENST00000607045 SENP3-EIF4A1A0A087X0R7 540 aa29.64■■■□□ 2.34
TMEM248-207ENST00000607045 CRKLP46109 303 aaKnown RBP29.64■■■□□ 2.34
TMEM248-207ENST00000607045 A0A0G2JLW4 131 aa29.62■■■□□ 2.33
TMEM248-207ENST00000607045 DIAPH1O60610 1272 aaKnown RBP29.62■■■□□ 2.33
TMEM248-207ENST00000607045 MTHFSDQ2M296 383 aaKnown RBP29.61■■■□□ 2.33
TMEM248-207ENST00000607045 SLC52A2Q9HAB3 445 aa29.61■■■□□ 2.33
TMEM248-207ENST00000607045 SRP68Q9UHB9 627 aaKnown RBP29.61■■■□□ 2.33
TMEM248-207ENST00000607045 CEP350Q5VT06 3117 aa29.6■■■□□ 2.33
TMEM248-207ENST00000607045 RNMTO43148 476 aaKnown RBP29.6■■■□□ 2.33
TMEM248-207ENST00000607045 SLC39A6Q13433 755 aa29.6■■■□□ 2.33
TMEM248-207ENST00000607045 INTS5Q6P9B9 1019 aaKnown RBP29.6■■■□□ 2.33
TMEM248-207ENST00000607045 MYH14Q7Z406 1995 aaKnown RBP29.6■■■□□ 2.33
TMEM248-207ENST00000607045 ATP10DQ9P241 1426 aa29.6■■■□□ 2.33
TMEM248-207ENST00000607045 TGFB2P61812 414 aa29.58■■■□□ 2.33
TMEM248-207ENST00000607045 DNAJC10Q8IXB1 793 aa29.58■■■□□ 2.33
TMEM248-207ENST00000607045 ZNF831Q5JPB2 1677 aa29.57■■■□□ 2.32
TMEM248-207ENST00000607045 PARP3Q9Y6F1 533 aa29.57■■■□□ 2.32
TMEM248-207ENST00000607045 DPEP1P16444 411 aa29.56■■■□□ 2.32
TMEM248-207ENST00000607045 FKBP8Q14318 412 aa29.56■■■□□ 2.32
TMEM248-207ENST00000607045 ZNF526Q8TF50 670 aaPredicted RBP29.56■■■□□ 2.32
TMEM248-207ENST00000607045 CCDC87Q9NVE4 849 aa29.55■■■□□ 2.32
TMEM248-207ENST00000607045 COL5A3P25940 1745 aaPredicted RBP29.54■■■□□ 2.32
TMEM248-207ENST00000607045 GPBP1L1Q9HC44 474 aaPredicted RBP29.54■■■□□ 2.32
TMEM248-207ENST00000607045 BCS1LQ9Y276 419 aa29.54■■■□□ 2.32
TMEM248-207ENST00000607045 PXDNLA1KZ92 1463 aa29.54■■■□□ 2.32
TMEM248-207ENST00000607045 CICQ96RK0 1608 aaPredicted RBP29.53■■■□□ 2.32
TMEM248-207ENST00000607045 USP42Q9H9J4 1324 aaKnown RBP29.51■■■□□ 2.32
TMEM248-207ENST00000607045 KCNA3P22001 575 aa29.51■■■□□ 2.31
TMEM248-207ENST00000607045 ADCY9O60503 1353 aa29.51■■■□□ 2.31
TMEM248-207ENST00000607045 U2SURPO15042 1029 aaKnown RBP29.5■■■□□ 2.31
TMEM248-207ENST00000607045 CYP19A1P11511 503 aaPredicted RBP29.5■■■□□ 2.31
TMEM248-207ENST00000607045 DDR1Q08345 913 aa29.5■■■□□ 2.31
TMEM248-207ENST00000607045 C10orf71Q711Q0 1435 aa29.5■■■□□ 2.31
TMEM248-207ENST00000607045 SCN11AQ9UI33 1791 aa29.49■■■□□ 2.31
TMEM248-207ENST00000607045 TM4SF1P30408 202 aa29.48■■■□□ 2.31
TMEM248-207ENST00000607045 USPL1Q5W0Q7 1092 aa29.47■■■□□ 2.31
TMEM248-207ENST00000607045 ARHGAP27Q6ZUM4 889 aa29.47■■■□□ 2.31
TMEM248-207ENST00000607045 NPC1L1Q9UHC9 1359 aa29.47■■■□□ 2.31
TMEM248-207ENST00000607045 FCHSD2O94868 740 aa29.46■■■□□ 2.31
TMEM248-207ENST00000607045 ZPR1O75312 459 aa29.45■■■□□ 2.31
TMEM248-207ENST00000607045 IL17REQ8NFR9 667 aa29.45■■■□□ 2.31
TMEM248-207ENST00000607045 TJP1Q07157 1748 aa29.45■■■□□ 2.3
TMEM248-207ENST00000607045 SOS1Q07889 1333 aaPredicted RBP29.45■■■□□ 2.3
TMEM248-207ENST00000607045 N4BP2Q86UW6 1770 aaPredicted RBP29.44■■■□□ 2.3
TMEM248-207ENST00000607045 ZBTB1Q9Y2K1 713 aa29.44■■■□□ 2.3
TMEM248-207ENST00000607045 C4AP0C0L4 1744 aa29.44■■■□□ 2.3
TMEM248-207ENST00000607045 KIF13BQ9NQT8 1826 aa29.43■■■□□ 2.3
TMEM248-207ENST00000607045 POLRMTO00411 1230 aaKnown RBP29.43■■■□□ 2.3
TMEM248-207ENST00000607045 KIAA1551Q9HCM1 1747 aa29.42■■■□□ 2.3
TMEM248-207ENST00000607045 COL3A1P02461 1466 aaPredicted RBP29.42■■■□□ 2.3
TMEM248-207ENST00000607045 CHRNA5P30532 468 aa29.41■■■□□ 2.3
TMEM248-207ENST00000607045 VSIG10Q8N0Z9 540 aa29.41■■■□□ 2.3
TMEM248-207ENST00000607045 PIM2Q9P1W9 311 aa29.41■■■□□ 2.3
TMEM248-207ENST00000607045 NARFQ9UHQ1 456 aa29.41■■■□□ 2.3
TMEM248-207ENST00000607045 MRC1P22897 1456 aa29.41■■■□□ 2.3
TMEM248-207ENST00000607045 PHACTR3Q96KR7 559 aa29.4■■■□□ 2.3
TMEM248-207ENST00000607045 GNAT3A8MTJ3 354 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms