RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 HSP90AB1P08238 724 aaKnown RBP33.26■■■□□ 2.91
SNX5-219ENST00000606602 YBX3P16989 372 aaKnown RBP eCLIP33.26■■■□□ 2.91
SNX5-219ENST00000606602 DCAF5Q96JK2 942 aa33.25■■■□□ 2.91
SNX5-219ENST00000606602 ERVV-2B6SEH9 535 aa33.24■■■□□ 2.91
SNX5-219ENST00000606602 GNPATO15228 680 aa33.24■■■□□ 2.91
SNX5-219ENST00000606602 GRIN3BO60391 1043 aa33.24■■■□□ 2.91
SNX5-219ENST00000606602 ZNF530Q6P9A1 599 aaPredicted RBP33.24■■■□□ 2.91
SNX5-219ENST00000606602 AMOTQ4VCS5 1084 aa33.23■■■□□ 2.91
SNX5-219ENST00000606602 AEBP1Q8IUX7 1158 aa33.22■■■□□ 2.91
SNX5-219ENST00000606602 UBR3Q6ZT12 1888 aa33.2■■■□□ 2.91
SNX5-219ENST00000606602 RBM42Q9BTD8 480 aaKnown RBP33.2■■■□□ 2.91
SNX5-219ENST00000606602 CABP4P57796 275 aa33.18■■■□□ 2.9
SNX5-219ENST00000606602 SULT6B1Q6IMI4 303 aa33.18■■■□□ 2.9
SNX5-219ENST00000606602 C1orf141Q5JVX7 400 aa33.17■■■□□ 2.9
SNX5-219ENST00000606602 MTHFSP49914 203 aa33.16■■■□□ 2.9
SNX5-219ENST00000606602 AMER1Q5JTC6 1135 aaPredicted RBP33.16■■■□□ 2.9
SNX5-219ENST00000606602 SLC4A9Q96Q91 983 aa33.16■■■□□ 2.9
SNX5-219ENST00000606602 KDRP35968 1356 aa33.16■■■□□ 2.9
SNX5-219ENST00000606602 KDM6AO15550 1401 aaPredicted RBP33.16■■■□□ 2.9
SNX5-219ENST00000606602 KIF7Q2M1P5 1343 aa33.15■■■□□ 2.9
SNX5-219ENST00000606602 IL13P35225 146 aa33.14■■■□□ 2.9
SNX5-219ENST00000606602 RTCBQ9Y3I0 505 aaKnown RBP33.13■■■□□ 2.89
SNX5-219ENST00000606602 TRAPPC3LQ5T215 181 aa33.11■■■□□ 2.89
SNX5-219ENST00000606602 C1QTNF8P60827 252 aa33.09■■■□□ 2.89
SNX5-219ENST00000606602 RC3H1Q5TC82 1133 aaKnown RBP33.09■■■□□ 2.89
SNX5-219ENST00000606602 MMP10P09238 476 aa33.08■■■□□ 2.89
SNX5-219ENST00000606602 NFATC2IPQ8NCF5 419 aa33.08■■■□□ 2.89
SNX5-219ENST00000606602 PTCD1O75127 700 aaKnown RBP33.07■■■□□ 2.88
SNX5-219ENST00000606602 WWC3Q9ULE0 1092 aa33.07■■■□□ 2.88
SNX5-219ENST00000606602 CNTNAP4Q9C0A0 1308 aa33.06■■■□□ 2.88
SNX5-219ENST00000606602 GIGYF1O75420 1035 aaPredicted RBP33.05■■■□□ 2.88
SNX5-219ENST00000606602 ARHGEF1Q92888 912 aaKnown RBP33.05■■■□□ 2.88
SNX5-219ENST00000606602 ADRA2BP18089 450 aa33.04■■■□□ 2.88
SNX5-219ENST00000606602 NLGN1Q8N2Q7 840 aa33.04■■■□□ 2.88
SNX5-219ENST00000606602 RPS6KA4O75676 772 aa33.03■■■□□ 2.88
SNX5-219ENST00000606602 ZNF831Q5JPB2 1677 aa33.03■■■□□ 2.88
SNX5-219ENST00000606602 RFC4P35249 363 aa33.02■■■□□ 2.88
SNX5-219ENST00000606602 PER1O15534 1290 aaPredicted RBP33.01■■■□□ 2.87
SNX5-219ENST00000606602 AKAP4Q5JQC9 854 aa33.01■■■□□ 2.87
SNX5-219ENST00000606602 CC2D1BQ5T0F9 858 aaKnown RBP33.01■■■□□ 2.87
SNX5-219ENST00000606602 SENP3-EIF4A1A0A087X0R7 540 aa32.99■■■□□ 2.87
SNX5-219ENST00000606602 HMOX1P09601 288 aa32.99■■■□□ 2.87
SNX5-219ENST00000606602 GYS1P13807 737 aa32.97■■■□□ 2.87
SNX5-219ENST00000606602 CRKLP46109 303 aaKnown RBP32.97■■■□□ 2.87
SNX5-219ENST00000606602 COL5A3P25940 1745 aaPredicted RBP32.97■■■□□ 2.87
SNX5-219ENST00000606602 ATP10DQ9P241 1426 aa32.96■■■□□ 2.87
SNX5-219ENST00000606602 DIAPH1O60610 1272 aaKnown RBP32.95■■■□□ 2.87
SNX5-219ENST00000606602 LGR6Q9HBX8 967 aa32.95■■■□□ 2.87
SNX5-219ENST00000606602 SLC52A2Q9HAB3 445 aa32.94■■■□□ 2.86
SNX5-219ENST00000606602 CICQ96RK0 1608 aaPredicted RBP32.93■■■□□ 2.86
SNX5-219ENST00000606602 TGFB2P61812 414 aa32.92■■■□□ 2.86
SNX5-219ENST00000606602 CNGB1Q14028 1251 aaPredicted RBP32.92■■■□□ 2.86
SNX5-219ENST00000606602 PARP3Q9Y6F1 533 aa32.92■■■□□ 2.86
SNX5-219ENST00000606602 CCDC87Q9NVE4 849 aa32.91■■■□□ 2.86
SNX5-219ENST00000606602 PXDNLA1KZ92 1463 aa32.91■■■□□ 2.86
SNX5-219ENST00000606602 RNMTO43148 476 aaKnown RBP32.9■■■□□ 2.86
SNX5-219ENST00000606602 A0A0G2JLW4 131 aa32.89■■■□□ 2.86
SNX5-219ENST00000606602 MTHFSDQ2M296 383 aaKnown RBP32.89■■■□□ 2.86
SNX5-219ENST00000606602 SRP68Q9UHB9 627 aaKnown RBP32.89■■■□□ 2.86
SNX5-219ENST00000606602 C10orf71Q711Q0 1435 aa32.88■■■□□ 2.85
SNX5-219ENST00000606602 ADCY9O60503 1353 aa32.88■■■□□ 2.85
SNX5-219ENST00000606602 INTS5Q6P9B9 1019 aaKnown RBP32.88■■■□□ 2.85
SNX5-219ENST00000606602 GPBP1L1Q9HC44 474 aaPredicted RBP32.88■■■□□ 2.85
SNX5-219ENST00000606602 SCN11AQ9UI33 1791 aa32.88■■■□□ 2.85
SNX5-219ENST00000606602 MYH14Q7Z406 1995 aaKnown RBP32.87■■■□□ 2.85
SNX5-219ENST00000606602 DNAJC10Q8IXB1 793 aa32.87■■■□□ 2.85
SNX5-219ENST00000606602 ZNF526Q8TF50 670 aaPredicted RBP32.87■■■□□ 2.85
SNX5-219ENST00000606602 SLC39A6Q13433 755 aa32.86■■■□□ 2.85
SNX5-219ENST00000606602 USP42Q9H9J4 1324 aaKnown RBP32.85■■■□□ 2.85
SNX5-219ENST00000606602 BCS1LQ9Y276 419 aa32.85■■■□□ 2.85
SNX5-219ENST00000606602 NPC1L1Q9UHC9 1359 aa32.84■■■□□ 2.85
SNX5-219ENST00000606602 FKBP8Q14318 412 aa32.84■■■□□ 2.85
SNX5-219ENST00000606602 C4AP0C0L4 1744 aa32.84■■■□□ 2.85
SNX5-219ENST00000606602 TJP1Q07157 1748 aa32.84■■■□□ 2.85
SNX5-219ENST00000606602 DPEP1P16444 411 aa32.83■■■□□ 2.85
SNX5-219ENST00000606602 KIF13BQ9NQT8 1826 aa32.82■■■□□ 2.84
SNX5-219ENST00000606602 MRC1P22897 1456 aa32.82■■■□□ 2.84
SNX5-219ENST00000606602 U2SURPO15042 1029 aaKnown RBP32.82■■■□□ 2.84
SNX5-219ENST00000606602 CYP19A1P11511 503 aaPredicted RBP32.79■■■□□ 2.84
SNX5-219ENST00000606602 KIAA1551Q9HCM1 1747 aa32.79■■■□□ 2.84
SNX5-219ENST00000606602 ZPR1O75312 459 aa32.78■■■□□ 2.84
SNX5-219ENST00000606602 DDR1Q08345 913 aa32.78■■■□□ 2.84
SNX5-219ENST00000606602 N4BP2Q86UW6 1770 aaPredicted RBP32.78■■■□□ 2.84
SNX5-219ENST00000606602 FCHSD2O94868 740 aa32.77■■■□□ 2.84
SNX5-219ENST00000606602 COL3A1P02461 1466 aaPredicted RBP32.77■■■□□ 2.84
SNX5-219ENST00000606602 SOS1Q07889 1333 aaPredicted RBP32.77■■■□□ 2.84
SNX5-219ENST00000606602 USPL1Q5W0Q7 1092 aa32.76■■■□□ 2.83
SNX5-219ENST00000606602 ARHGAP27Q6ZUM4 889 aa32.76■■■□□ 2.83
SNX5-219ENST00000606602 KCPQ6ZWJ8 1503 aa32.75■■■□□ 2.83
SNX5-219ENST00000606602 KCNA3P22001 575 aa32.74■■■□□ 2.83
SNX5-219ENST00000606602 VSIG10Q8N0Z9 540 aa32.74■■■□□ 2.83
SNX5-219ENST00000606602 TM4SF1P30408 202 aa32.73■■■□□ 2.83
SNX5-219ENST00000606602 ZBTB1Q9Y2K1 713 aa32.73■■■□□ 2.83
SNX5-219ENST00000606602 ADAMTS7Q9UKP4 1686 aa32.72■■■□□ 2.83
SNX5-219ENST00000606602 POLRMTO00411 1230 aaKnown RBP32.72■■■□□ 2.83
SNX5-219ENST00000606602 TTC5Q8N0Z6 440 aa32.72■■■□□ 2.83
SNX5-219ENST00000606602 GAS2L2Q8NHY3 880 aa32.72■■■□□ 2.83
SNX5-219ENST00000606602 PIM2Q9P1W9 311 aa32.72■■■□□ 2.83
SNX5-219ENST00000606602 GNAT3A8MTJ3 354 aa32.71■■■□□ 2.83
SNX5-219ENST00000606602 TEFQ10587 303 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms