RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 ADGRF5Q8IZF2 1346 aa4.23□□□□□ -1.73
VCAM1-205ENST00000603679 KRT28Q7Z3Y7 464 aa4.22□□□□□ -1.73
VCAM1-205ENST00000603679 ZNF784Q8NCA9 323 aaPredicted RBP4.22□□□□□ -1.73
VCAM1-205ENST00000603679 KCPQ6ZWJ8 1503 aa4.22□□□□□ -1.73
VCAM1-205ENST00000603679 TMCO4Q5TGY1 634 aa4.22□□□□□ -1.73
VCAM1-205ENST00000603679 C8orf37Q96NL8 207 aa4.22□□□□□ -1.73
VCAM1-205ENST00000603679 SPON1Q9HCB6 807 aa4.22□□□□□ -1.73
VCAM1-205ENST00000603679 WASLO00401 505 aaPredicted RBP4.21□□□□□ -1.73
VCAM1-205ENST00000603679 CD2APQ9Y5K6 639 aa4.21□□□□□ -1.73
VCAM1-205ENST00000603679 TAF1P21675 1872 aa4.21□□□□□ -1.73
VCAM1-205ENST00000603679 HSP90B1P14625 803 aaKnown RBP4.21□□□□□ -1.74
VCAM1-205ENST00000603679 FSTL1Q12841 308 aa4.21□□□□□ -1.74
VCAM1-205ENST00000603679 MFSD10Q14728 455 aa4.21□□□□□ -1.74
VCAM1-205ENST00000603679 TCP11L2Q8N4U5 519 aa4.21□□□□□ -1.74
VCAM1-205ENST00000603679 TRIM52Q96A61 297 aa4.21□□□□□ -1.74
VCAM1-205ENST00000603679 PRELPP51888 382 aa4.2□□□□□ -1.74
VCAM1-205ENST00000603679 ZNF467Q7Z7K2 595 aaPredicted RBP4.2□□□□□ -1.74
VCAM1-205ENST00000603679 PDE4AP27815 886 aa4.2□□□□□ -1.74
VCAM1-205ENST00000603679 RBM46Q8TBY0 533 aaKnown RBP4.2□□□□□ -1.74
VCAM1-205ENST00000603679 CDK11BP21127 795 aaKnown RBP4.19□□□□□ -1.74
VCAM1-205ENST00000603679 CCDC97Q96F63 343 aaPredicted RBP4.19□□□□□ -1.74
VCAM1-205ENST00000603679 NPC1L1Q9UHC9 1359 aa4.19□□□□□ -1.74
VCAM1-205ENST00000603679 MINK1Q8N4C8 1332 aaPredicted RBP4.19□□□□□ -1.74
VCAM1-205ENST00000603679 LTBP3Q9NS15 1303 aa4.19□□□□□ -1.74
VCAM1-205ENST00000603679 CAMK2BQ13554 666 aa4.19□□□□□ -1.74
VCAM1-205ENST00000603679 NBPF8Q3BBV2 869 aa4.19□□□□□ -1.74
VCAM1-205ENST00000603679 NBPF14Q5TI25 921 aa4.19□□□□□ -1.74
VCAM1-205ENST00000603679 SLX4Q8IY92 1834 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 A0A1W2PP64 1363 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 DSG3P32926 999 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 MFAP1P55081 439 aaKnown RBP4.18□□□□□ -1.74
VCAM1-205ENST00000603679 PDAP1Q13442 181 aaKnown RBP4.18□□□□□ -1.74
VCAM1-205ENST00000603679 ARHGEF25Q86VW2 580 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 FAM117AQ9C073 453 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 E9PSI1 815 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 SLC15A2Q16348 729 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 HSPA6P17066 643 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 APLP1P51693 650 aa4.18□□□□□ -1.74
VCAM1-205ENST00000603679 EZH2Q15910 746 aaKnown RBP4.18□□□□□ -1.74
VCAM1-205ENST00000603679 IGSF3O75054 1194 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 AMHR2Q16671 573 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 PCMTD1Q96MG8 357 aaPredicted RBP4.17□□□□□ -1.74
VCAM1-205ENST00000603679 MTMR7Q9Y216 660 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 GRIN3BO60391 1043 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 YY1P25490 414 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 NLRP6P59044 892 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 DHX37Q8IY37 1157 aaKnown RBP4.17□□□□□ -1.74
VCAM1-205ENST00000603679 MFRPQ9BY79 579 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 PNPLA7Q6ZV29 1317 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 CACNA1SQ13698 1873 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 AEBP1Q8IUX7 1158 aa4.17□□□□□ -1.74
VCAM1-205ENST00000603679 IBTKQ9P2D0 1353 aaPredicted RBP4.16□□□□□ -1.74
VCAM1-205ENST00000603679 SOX12O15370 315 aa4.16□□□□□ -1.74
VCAM1-205ENST00000603679 FLAD1Q8NFF5 587 aa4.16□□□□□ -1.74
VCAM1-205ENST00000603679 PRDM10Q9NQV6 1147 aa4.16□□□□□ -1.74
VCAM1-205ENST00000603679 KIF3CO14782 793 aa4.16□□□□□ -1.74
VCAM1-205ENST00000603679 ABCB7O75027 752 aa4.16□□□□□ -1.74
VCAM1-205ENST00000603679 SF3B2Q13435 895 aaKnown RBP4.16□□□□□ -1.74
VCAM1-205ENST00000603679 RBM26Q5T8P6 1007 aaKnown RBP4.16□□□□□ -1.74
VCAM1-205ENST00000603679 GZF1Q9H116 711 aaPredicted RBP4.16□□□□□ -1.74
VCAM1-205ENST00000603679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.16□□□□□ -1.74
VCAM1-205ENST00000603679 ERBB3P21860 1342 aa4.15□□□□□ -1.74
VCAM1-205ENST00000603679 SPDYE16A6NNV3 312 aaPredicted RBP4.15□□□□□ -1.74
VCAM1-205ENST00000603679 KCNA1Q09470 495 aa4.15□□□□□ -1.74
VCAM1-205ENST00000603679 KCNH5Q8NCM2 988 aa4.15□□□□□ -1.74
VCAM1-205ENST00000603679 CCDC136Q96JN2 1154 aa4.15□□□□□ -1.74
VCAM1-205ENST00000603679 SYT17Q9BSW7 474 aa4.15□□□□□ -1.74
VCAM1-205ENST00000603679 ANO8Q9HCE9 1232 aaPredicted RBP4.15□□□□□ -1.74
VCAM1-205ENST00000603679 COL2A1P02458 1487 aaPredicted RBP4.15□□□□□ -1.75
VCAM1-205ENST00000603679 MNX1P50219 401 aaPredicted RBP4.15□□□□□ -1.75
VCAM1-205ENST00000603679 MPHOSPH9Q99550 1183 aa4.15□□□□□ -1.75
VCAM1-205ENST00000603679 NUP98P52948 1817 aa4.15□□□□□ -1.75
VCAM1-205ENST00000603679 DEFB132Q7Z7B7 95 aa4.15□□□□□ -1.75
VCAM1-205ENST00000603679 CLUAP1Q96AJ1 413 aa4.15□□□□□ -1.75
VCAM1-205ENST00000603679 NUTM2BA6NNL0 878 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 NUTM2EB1AL46 878 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 NUTM2DQ5VT03 806 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 NUTM2AQ8IVF1 878 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 RASEFQ8IZ41 740 aa4.14□□□□□ -1.75
VCAM1-205ENST00000603679 MAST2Q6P0Q8 1798 aa4.14□□□□□ -1.75
VCAM1-205ENST00000603679 MARCH10Q8NA82 808 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 CREBZFQ9NS37 354 aa4.14□□□□□ -1.75
VCAM1-205ENST00000603679 PYGBP11216 843 aa4.14□□□□□ -1.75
VCAM1-205ENST00000603679 MCM6Q14566 821 aa4.14□□□□□ -1.75
VCAM1-205ENST00000603679 RC3H1Q5TC82 1133 aaKnown RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 ZNF526Q8TF50 670 aaPredicted RBP4.14□□□□□ -1.75
VCAM1-205ENST00000603679 NEFLP07196 543 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 RBM25P49756 843 aaKnown RBP4.13□□□□□ -1.75
VCAM1-205ENST00000603679 EN1Q05925 392 aaPredicted RBP4.13□□□□□ -1.75
VCAM1-205ENST00000603679 MAP2K5Q13163 448 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 DDX27Q96GQ7 796 aaKnown RBP4.13□□□□□ -1.75
VCAM1-205ENST00000603679 TESK2Q96S53 571 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 LARP6Q9BRS8 491 aaKnown RBP4.13□□□□□ -1.75
VCAM1-205ENST00000603679 BTG4Q9NY30 223 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 CNTNAP4Q9C0A0 1308 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 ZNF236Q9UL36 1845 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 PDZRN3Q9UPQ7 1066 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 CCDC61Q9Y6R9 512 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 TGFB2P61812 414 aa4.13□□□□□ -1.75
VCAM1-205ENST00000603679 NOM1Q5C9Z4 860 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms