RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 GTPBP3Q969Y2 492 aaKnown RBP11.09□□□□□ -0.63
TUBE1-205ENST00000603651 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
TUBE1-205ENST00000603651 TRIM22Q8IYM9 498 aa11.08□□□□□ -0.64
TUBE1-205ENST00000603651 ADAMTS19Q8TE59 1207 aa11.08□□□□□ -0.64
TUBE1-205ENST00000603651 SCNN1DP51172 638 aa11.07□□□□□ -0.64
TUBE1-205ENST00000603651 NCOA4Q13772 614 aa11.07□□□□□ -0.64
TUBE1-205ENST00000603651 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
TUBE1-205ENST00000603651 NOD1Q9Y239 953 aa11.07□□□□□ -0.64
TUBE1-205ENST00000603651 HRH3Q9Y5N1 445 aa11.07□□□□□ -0.64
TUBE1-205ENST00000603651 F11P03951 625 aa11.06□□□□□ -0.64
TUBE1-205ENST00000603651 INHAP05111 366 aa11.06□□□□□ -0.64
TUBE1-205ENST00000603651 FOXR1Q6PIV2 292 aa11.06□□□□□ -0.64
TUBE1-205ENST00000603651 USP17L5A8MUK1 530 aa11.05□□□□□ -0.64
TUBE1-205ENST00000603651 H7C1W4 665 aa11.05□□□□□ -0.64
TUBE1-205ENST00000603651 PLA2G4AP47712 749 aa11.05□□□□□ -0.64
TUBE1-205ENST00000603651 GTF2IP78347 998 aa11.05□□□□□ -0.64
TUBE1-205ENST00000603651 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-205ENST00000603651 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
TUBE1-205ENST00000603651 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
TUBE1-205ENST00000603651 GAS6Q14393 721 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 TBC1D9Q6ZT07 1266 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 RHBDD1Q8TEB9 315 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 WHAMMQ8TF30 809 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 RUBCNLQ9H714 662 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 PCDHGA11Q9Y5H2 935 aa11.03□□□□□ -0.64
TUBE1-205ENST00000603651 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.65
TUBE1-205ENST00000603651 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.65
TUBE1-205ENST00000603651 SVOPQ8N4V2 548 aa11.02□□□□□ -0.65
TUBE1-205ENST00000603651 AIDAQ96BJ3 306 aa11.02□□□□□ -0.65
TUBE1-205ENST00000603651 TRERF1Q96PN7 1200 aa11.02□□□□□ -0.65
TUBE1-205ENST00000603651 A0A1B0GTH6 734 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 ADAMTS2O95450 1211 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 MSX1P28360 303 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 SMTNP53814 917 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
TUBE1-205ENST00000603651 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 UCN2Q96RP3 112 aa11.01□□□□□ -0.65
TUBE1-205ENST00000603651 GLMNQ92990 594 aa11□□□□□ -0.65
TUBE1-205ENST00000603651 GMCL1Q96IK5 515 aa11□□□□□ -0.65
TUBE1-205ENST00000603651 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
TUBE1-205ENST00000603651 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
TUBE1-205ENST00000603651 USP17L2Q6R6M4 530 aa10.99□□□□□ -0.65
TUBE1-205ENST00000603651 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
TUBE1-205ENST00000603651 ZNF385CQ66K41 422 aaPredicted RBP10.98□□□□□ -0.65
TUBE1-205ENST00000603651 NIFKQ9BYG3 293 aaKnown RBP10.98□□□□□ -0.65
TUBE1-205ENST00000603651 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
TUBE1-205ENST00000603651 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
TUBE1-205ENST00000603651 A6NJY4 79 aa10.97□□□□□ -0.65
TUBE1-205ENST00000603651 ATP9BO43861 1147 aa10.97□□□□□ -0.65
TUBE1-205ENST00000603651 LZTS3O60299 673 aaPredicted RBP10.97□□□□□ -0.65
TUBE1-205ENST00000603651 ZNF358Q9NW07 568 aa10.97□□□□□ -0.65
TUBE1-205ENST00000603651 PARP3Q9Y6F1 533 aa10.97□□□□□ -0.65
TUBE1-205ENST00000603651 IGF1RP08069 1367 aa10.96□□□□□ -0.65
TUBE1-205ENST00000603651 TRIM50Q86XT4 487 aa10.96□□□□□ -0.65
TUBE1-205ENST00000603651 FNBP4Q8N3X1 1017 aaPredicted RBP10.96□□□□□ -0.65
TUBE1-205ENST00000603651 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
TUBE1-205ENST00000603651 MBIPQ9NS73 344 aa10.96□□□□□ -0.65
TUBE1-205ENST00000603651 BACH1O14867 736 aa10.95□□□□□ -0.66
TUBE1-205ENST00000603651 THBS1P07996 1170 aa10.95□□□□□ -0.66
TUBE1-205ENST00000603651 MX2P20592 715 aa10.95□□□□□ -0.66
TUBE1-205ENST00000603651 SRSF11Q05519 484 aaKnown RBP10.95□□□□□ -0.66
TUBE1-205ENST00000603651 TBCELQ5QJ74 424 aa10.95□□□□□ -0.66
TUBE1-205ENST00000603651 LYPD4Q6UWN0 246 aa10.95□□□□□ -0.66
TUBE1-205ENST00000603651 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
TUBE1-205ENST00000603651 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
TUBE1-205ENST00000603651 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
TUBE1-205ENST00000603651 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
TUBE1-205ENST00000603651 TFIP11Q9UBB9 837 aaKnown RBP10.94□□□□□ -0.66
TUBE1-205ENST00000603651 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
TUBE1-205ENST00000603651 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
TUBE1-205ENST00000603651 MAP3K10Q02779 954 aa10.93□□□□□ -0.66
TUBE1-205ENST00000603651 ARSJQ5FYB0 599 aaPredicted RBP10.93□□□□□ -0.66
TUBE1-205ENST00000603651 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
TUBE1-205ENST00000603651 SLC4A9Q96Q91 983 aa10.93□□□□□ -0.66
TUBE1-205ENST00000603651 DNAAF2Q9NVR5 837 aaKnown RBP10.93□□□□□ -0.66
TUBE1-205ENST00000603651 ADAMTS8Q9UP79 889 aa10.93□□□□□ -0.66
TUBE1-205ENST00000603651 CDK2AP1O14519 115 aa10.92□□□□□ -0.66
TUBE1-205ENST00000603651 CLDN10P78369 228 aa10.92□□□□□ -0.66
TUBE1-205ENST00000603651 PLEKHM2Q8IWE5 1019 aa10.92□□□□□ -0.66
TUBE1-205ENST00000603651 OGFOD1Q8N543 542 aa10.92□□□□□ -0.66
TUBE1-205ENST00000603651 A6NJR5 290 aa10.91□□□□□ -0.66
TUBE1-205ENST00000603651 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
TUBE1-205ENST00000603651 NBPF1Q3BBV0 1214 aa10.91□□□□□ -0.66
TUBE1-205ENST00000603651 CCDC102BQ68D86 513 aa10.91□□□□□ -0.66
TUBE1-205ENST00000603651 ABHD17AQ96GS6 310 aa10.91□□□□□ -0.66
TUBE1-205ENST00000603651 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 CELA2BP08218 269 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 MTFR1Q15390 333 aa10.9□□□□□ -0.66
TUBE1-205ENST00000603651 ZNF777Q9ULD5 760 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 IQSEC3Q9UPP2 1182 aaPredicted RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
TUBE1-205ENST00000603651 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
TUBE1-205ENST00000603651 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
TUBE1-205ENST00000603651 ATP4AP20648 1035 aa10.89□□□□□ -0.67
TUBE1-205ENST00000603651 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
TUBE1-205ENST00000603651 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
TUBE1-205ENST00000603651 SCHIP1Q9P0W5 487 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms