RNA–Protein interactions for RNA: ENST00000602733.5

TCP11L1-211, Transcript of t-complex 11 like 1, human

TSL 4

Gene TCP11L1, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11L1-211	ENST00000602733	SENP3-EIF4A1	A0A087X0R7	540 aa		33.35	■■■□□ 2.93
TCP11L1-211	ENST00000602733	WWC3	Q9ULE0	1092 aa		33.35	■■■□□ 2.93
TCP11L1-211	ENST00000602733	KDR	P35968	1356 aa		33.34	■■■□□ 2.93
TCP11L1-211	ENST00000602733	GNPAT	O15228	680 aa		33.34	■■■□□ 2.93
TCP11L1-211	ENST00000602733	COL5A3	P25940	1745 aa	Predicted RBP	33.33	■■■□□ 2.93
TCP11L1-211	ENST00000602733	KDM6A	O15550	1401 aa	Predicted RBP	33.32	■■■□□ 2.92
TCP11L1-211	ENST00000602733	ZNF831	Q5JPB2	1677 aa		33.32	■■■□□ 2.92
TCP11L1-211	ENST00000602733	MYH14	Q7Z406	1995 aa	Known RBP	33.31	■■■□□ 2.92
TCP11L1-211	ENST00000602733	GIGYF1	O75420	1035 aa	Predicted RBP	33.31	■■■□□ 2.92
TCP11L1-211	ENST00000602733	AEBP1	Q8IUX7	1158 aa		33.3	■■■□□ 2.92
TCP11L1-211	ENST00000602733	KIAA1551	Q9HCM1	1747 aa		33.3	■■■□□ 2.92
TCP11L1-211	ENST00000602733	PLEKHG2	Q9H7P9	1386 aa		33.28	■■■□□ 2.92
TCP11L1-211	ENST00000602733	KIF13B	Q9NQT8	1826 aa		33.28	■■■□□ 2.92
TCP11L1-211	ENST00000602733	ATP10D	Q9P241	1426 aa		33.28	■■■□□ 2.92
TCP11L1-211	ENST00000602733	ERVV-2	B6SEH9	535 aa		33.27	■■■□□ 2.92
TCP11L1-211	ENST00000602733	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.26	■■■□□ 2.91
TCP11L1-211	ENST00000602733	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.25	■■■□□ 2.91
TCP11L1-211	ENST00000602733	DCAF5	Q96JK2	942 aa		33.25	■■■□□ 2.91
TCP11L1-211	ENST00000602733	RBM42	Q9BTD8	480 aa	Known RBP	33.25	■■■□□ 2.91
TCP11L1-211	ENST00000602733	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.24	■■■□□ 2.91
TCP11L1-211	ENST00000602733	ADCY9	O60503	1353 aa		33.23	■■■□□ 2.91
TCP11L1-211	ENST00000602733	MORC1	Q86VD1	984 aa		33.23	■■■□□ 2.91
TCP11L1-211	ENST00000602733	C4A	P0C0L4	1744 aa		33.22	■■■□□ 2.91
TCP11L1-211	ENST00000602733	MMP10	P09238	476 aa		33.22	■■■□□ 2.91
TCP11L1-211	ENST00000602733	ARHGEF1	Q92888	912 aa	Known RBP	33.2	■■■□□ 2.91
TCP11L1-211	ENST00000602733	CIC	Q96RK0	1608 aa	Predicted RBP	33.2	■■■□□ 2.9
TCP11L1-211	ENST00000602733	SCN11A	Q9UI33	1791 aa		33.19	■■■□□ 2.9
TCP11L1-211	ENST00000602733	HSP90AB1	P08238	724 aa	Known RBP	33.19	■■■□□ 2.9
TCP11L1-211	ENST00000602733	TRAPPC3L	Q5T215	181 aa		33.19	■■■□□ 2.9
TCP11L1-211	ENST00000602733	RTCB	Q9Y3I0	505 aa	Known RBP	33.19	■■■□□ 2.9
TCP11L1-211	ENST00000602733	IL13	P35225	146 aa		33.18	■■■□□ 2.9
TCP11L1-211	ENST00000602733	CABP4	P57796	275 aa		33.18	■■■□□ 2.9
TCP11L1-211	ENST00000602733	AMOT	Q4VCS5	1084 aa		33.18	■■■□□ 2.9
TCP11L1-211	ENST00000602733	SULT6B1	Q6IMI4	303 aa		33.18	■■■□□ 2.9
TCP11L1-211	ENST00000602733	TJP1	Q07157	1748 aa		33.17	■■■□□ 2.9
TCP11L1-211	ENST00000602733	VIRMA	Q69YN4	1812 aa	Known RBP	33.17	■■■□□ 2.9
TCP11L1-211	ENST00000602733	RC3H1	Q5TC82	1133 aa	Known RBP	33.17	■■■□□ 2.9
TCP11L1-211	ENST00000602733	PXDNL	A1KZ92	1463 aa		33.17	■■■□□ 2.9
TCP11L1-211	ENST00000602733	CNTNAP4	Q9C0A0	1308 aa		33.16	■■■□□ 2.9
TCP11L1-211	ENST00000602733	MTHFS	P49914	203 aa		33.15	■■■□□ 2.9
TCP11L1-211	ENST00000602733	RPS6KA4	O75676	772 aa		33.14	■■■□□ 2.9
TCP11L1-211	ENST00000602733	NFATC2IP	Q8NCF5	419 aa		33.14	■■■□□ 2.9
TCP11L1-211	ENST00000602733	CCER1	Q8TC90	406 aa	Predicted RBP	33.14	■■■□□ 2.9
TCP11L1-211	ENST00000602733	ZNF526	Q8TF50	670 aa	Predicted RBP	33.14	■■■□□ 2.9
TCP11L1-211	ENST00000602733	GYS1	P13807	737 aa		33.13	■■■□□ 2.89
TCP11L1-211	ENST00000602733	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.13	■■■□□ 2.89
TCP11L1-211	ENST00000602733	BRCA1	P38398	1863 aa	Known RBP	33.13	■■■□□ 2.89
TCP11L1-211	ENST00000602733	PTCD1	O75127	700 aa	Known RBP	33.12	■■■□□ 2.89
TCP11L1-211	ENST00000602733	KNSTRN	Q9Y448	316 aa		33.11	■■■□□ 2.89
TCP11L1-211	ENST00000602733	C10orf71	Q711Q0	1435 aa		33.11	■■■□□ 2.89
TCP11L1-211	ENST00000602733		A0A0G2JLW4	131 aa		33.1	■■■□□ 2.89
TCP11L1-211	ENST00000602733	NLGN1	Q8N2Q7	840 aa		33.1	■■■□□ 2.89
TCP11L1-211	ENST00000602733	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.1	■■■□□ 2.89
TCP11L1-211	ENST00000602733	C1orf141	Q5JVX7	400 aa		33.09	■■■□□ 2.89
TCP11L1-211	ENST00000602733	ADAMTS7	Q9UKP4	1686 aa		33.09	■■■□□ 2.89
TCP11L1-211	ENST00000602733	ADRA2B	P18089	450 aa		33.08	■■■□□ 2.89
TCP11L1-211	ENST00000602733	CEP350	Q5VT06	3117 aa		33.08	■■■□□ 2.89
TCP11L1-211	ENST00000602733	KIF7	Q2M1P5	1343 aa		33.07	■■■□□ 2.88
TCP11L1-211	ENST00000602733	RFC4	P35249	363 aa		33.06	■■■□□ 2.88
TCP11L1-211	ENST00000602733	CRKL	P46109	303 aa	Known RBP	33.06	■■■□□ 2.88
TCP11L1-211	ENST00000602733	SRP68	Q9UHB9	627 aa	Known RBP	33.06	■■■□□ 2.88
TCP11L1-211	ENST00000602733	LGR6	Q9HBX8	967 aa		33.05	■■■□□ 2.88
TCP11L1-211	ENST00000602733	DPEP1	P16444	411 aa		33.04	■■■□□ 2.88
TCP11L1-211	ENST00000602733	TGFB2	P61812	414 aa		33.04	■■■□□ 2.88
TCP11L1-211	ENST00000602733	INTS5	Q6P9B9	1019 aa	Known RBP	33.02	■■■□□ 2.88
TCP11L1-211	ENST00000602733	BCS1L	Q9Y276	419 aa		33.02	■■■□□ 2.88
TCP11L1-211	ENST00000602733	KCNA3	P22001	575 aa		33.01	■■■□□ 2.87
TCP11L1-211	ENST00000602733	PER1	O15534	1290 aa	Predicted RBP	33	■■■□□ 2.87
TCP11L1-211	ENST00000602733	HMOX1	P09601	288 aa		33	■■■□□ 2.87
TCP11L1-211	ENST00000602733	FKBP8	Q14318	412 aa		33	■■■□□ 2.87
TCP11L1-211	ENST00000602733	AKAP4	Q5JQC9	854 aa		33	■■■□□ 2.87
TCP11L1-211	ENST00000602733	CCDC87	Q9NVE4	849 aa		32.99	■■■□□ 2.87
TCP11L1-211	ENST00000602733	PARP3	Q9Y6F1	533 aa		32.99	■■■□□ 2.87
TCP11L1-211	ENST00000602733	ARFGEF1	Q9Y6D6	1849 aa		32.98	■■■□□ 2.87
TCP11L1-211	ENST00000602733	KIF3C	O14782	793 aa		32.98	■■■□□ 2.87
TCP11L1-211	ENST00000602733	DDR1	Q08345	913 aa		32.98	■■■□□ 2.87
TCP11L1-211	ENST00000602733	DNAJC10	Q8IXB1	793 aa		32.98	■■■□□ 2.87
TCP11L1-211	ENST00000602733	SLC52A2	Q9HAB3	445 aa		32.97	■■■□□ 2.87
TCP11L1-211	ENST00000602733	MRC1	P22897	1456 aa		32.97	■■■□□ 2.87
TCP11L1-211	ENST00000602733	USP42	Q9H9J4	1324 aa	Known RBP	32.97	■■■□□ 2.87
TCP11L1-211	ENST00000602733	SLC39A6	Q13433	755 aa		32.96	■■■□□ 2.87
TCP11L1-211	ENST00000602733	RNMT	O43148	476 aa	Known RBP	32.95	■■■□□ 2.87
TCP11L1-211	ENST00000602733	KCP	Q6ZWJ8	1503 aa		32.94	■■■□□ 2.86
TCP11L1-211	ENST00000602733	MTHFSD	Q2M296	383 aa	Known RBP	32.94	■■■□□ 2.86
TCP11L1-211	ENST00000602733	CC2D1B	Q5T0F9	858 aa	Known RBP	32.93	■■■□□ 2.86
TCP11L1-211	ENST00000602733	ARHGAP27	Q6ZUM4	889 aa		32.93	■■■□□ 2.86
TCP11L1-211	ENST00000602733	FCHSD2	O94868	740 aa		32.92	■■■□□ 2.86
TCP11L1-211	ENST00000602733	AFDN	P55196	1824 aa	Known RBP	32.92	■■■□□ 2.86
TCP11L1-211	ENST00000602733	TM4SF1	P30408	202 aa		32.9	■■■□□ 2.86
TCP11L1-211	ENST00000602733	UBR2	Q8IWV8	1755 aa		32.89	■■■□□ 2.86
TCP11L1-211	ENST00000602733	SOS1	Q07889	1333 aa	Predicted RBP	32.89	■■■□□ 2.86
TCP11L1-211	ENST00000602733	CYP19A1	P11511	503 aa	Predicted RBP	32.89	■■■□□ 2.86
TCP11L1-211	ENST00000602733	HSPA6	P17066	643 aa		32.89	■■■□□ 2.86
TCP11L1-211	ENST00000602733	POLRMT	O00411	1230 aa	Known RBP	32.88	■■■□□ 2.85
TCP11L1-211	ENST00000602733	USPL1	Q5W0Q7	1092 aa		32.88	■■■□□ 2.85
TCP11L1-211	ENST00000602733	COL3A1	P02461	1466 aa	Predicted RBP	32.87	■■■□□ 2.85
TCP11L1-211	ENST00000602733	DIAPH1	O60610	1272 aa	Known RBP	32.86	■■■□□ 2.85
TCP11L1-211	ENST00000602733	CHRNA5	P30532	468 aa		32.86	■■■□□ 2.85
TCP11L1-211	ENST00000602733	SBF1	O95248	1867 aa		32.86	■■■□□ 2.85
TCP11L1-211	ENST00000602733	ZBTB1	Q9Y2K1	713 aa		32.84	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms