RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 MS4A1P11836 297 aa9.37□□□□□ -0.91
HCG18-244ENST00000602516 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
HCG18-244ENST00000602516 FOXD4Q12950 439 aaPredicted RBP9.37□□□□□ -0.91
HCG18-244ENST00000602516 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
HCG18-244ENST00000602516 ZC3H12AQ5D1E8 599 aaKnown RBP9.37□□□□□ -0.91
HCG18-244ENST00000602516 MRVI1Q9Y6F6 885 aa9.37□□□□□ -0.91
HCG18-244ENST00000602516 NOL8Q76FK4 1167 aaKnown RBP9.37□□□□□ -0.91
HCG18-244ENST00000602516 MTA3Q9BTC8 594 aa9.37□□□□□ -0.91
HCG18-244ENST00000602516 PNPLA6Q8IY17 1366 aa9.36□□□□□ -0.91
HCG18-244ENST00000602516 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
HCG18-244ENST00000602516 TECPR2O15040 1411 aa9.36□□□□□ -0.91
HCG18-244ENST00000602516 C1QTNF12Q5T7M4 302 aa9.36□□□□□ -0.91
HCG18-244ENST00000602516 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
HCG18-244ENST00000602516 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
HCG18-244ENST00000602516 BCAR3O75815 825 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 PLEKHF1Q96S99 279 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 FAM135BQ49AJ0 1406 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 METP08581 1390 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 CPS1P31327 1500 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 CDC42BPGQ6DT37 1551 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 WAPLQ7Z5K2 1190 aa9.35□□□□□ -0.91
HCG18-244ENST00000602516 MYCBPQ99417 103 aaPredicted RBP9.35□□□□□ -0.91
HCG18-244ENST00000602516 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
HCG18-244ENST00000602516 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
HCG18-244ENST00000602516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.91
HCG18-244ENST00000602516 MSL3Q8N5Y2 521 aaKnown RBP9.34□□□□□ -0.91
HCG18-244ENST00000602516 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
HCG18-244ENST00000602516 TNRQ92752 1358 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 ESPNB1AK53 854 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 KCNJ4P48050 445 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 PDE3AQ14432 1141 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 KIAA1211Q6ZU35 1233 aa9.34□□□□□ -0.91
HCG18-244ENST00000602516 CENPQQ7L2Z9 268 aaPredicted RBP9.34□□□□□ -0.91
HCG18-244ENST00000602516 RBM28Q9NW13 759 aaKnown RBP9.34□□□□□ -0.91
HCG18-244ENST00000602516 U2AF1L5P0DN76 240 aaPredicted RBP9.34□□□□□ -0.92
HCG18-244ENST00000602516 HDGFP51858 240 aaKnown RBP9.34□□□□□ -0.92
HCG18-244ENST00000602516 RHBDL3P58872 404 aa9.34□□□□□ -0.92
HCG18-244ENST00000602516 U2AF1Q01081 240 aaKnown RBP eCLIP9.34□□□□□ -0.92
HCG18-244ENST00000602516 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.92
HCG18-244ENST00000602516 MON2Q7Z3U7 1717 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
HCG18-244ENST00000602516 TRIM34Q9BYJ4 488 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 FAM13BQ9NYF5 915 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 AKAP12Q02952 1782 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 TMEM2Q9UHN6 1383 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 TULP2O00295 520 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 NCAPGQ9BPX3 1015 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 BACH2Q9BYV9 841 aa9.33□□□□□ -0.92
HCG18-244ENST00000602516 MAP2P11137 1827 aaKnown RBP9.33□□□□□ -0.92
HCG18-244ENST00000602516 WASLO00401 505 aaPredicted RBP9.32□□□□□ -0.92
HCG18-244ENST00000602516 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
HCG18-244ENST00000602516 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
HCG18-244ENST00000602516 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
HCG18-244ENST00000602516 PDE4AP27815 886 aa9.32□□□□□ -0.92
HCG18-244ENST00000602516 RARSP54136 660 aaKnown RBP9.32□□□□□ -0.92
HCG18-244ENST00000602516 L1TD1Q5T7N2 865 aaKnown RBP9.32□□□□□ -0.92
HCG18-244ENST00000602516 GET4Q7L5D6 327 aaPredicted RBP9.32□□□□□ -0.92
HCG18-244ENST00000602516 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
HCG18-244ENST00000602516 SMC4Q9NTJ3 1288 aa9.32□□□□□ -0.92
HCG18-244ENST00000602516 C3P01024 1663 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 EDC4Q6P2E9 1401 aaKnown RBP9.31□□□□□ -0.92
HCG18-244ENST00000602516 KIF16BQ96L93 1317 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 ADAMTS13Q76LX8 1427 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 TPD52L2O43399 206 aaKnown RBP9.31□□□□□ -0.92
HCG18-244ENST00000602516 SMARCA5O60264 1052 aaPredicted RBP9.31□□□□□ -0.92
HCG18-244ENST00000602516 COQ9O75208 318 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 STK24Q9Y6E0 443 aa9.31□□□□□ -0.92
HCG18-244ENST00000602516 PPIP5K1Q6PFW1 1433 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 ZNF280DQ6N043 979 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 DIAPH1O60610 1272 aaKnown RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 CCT2P78371 535 aaKnown RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 ITSN1Q15811 1721 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 MPHOSPH10O00566 681 aaKnown RBP9.3□□□□□ -0.92
HCG18-244ENST00000602516 TMCO4Q5TGY1 634 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 PPME1Q9Y570 386 aa9.3□□□□□ -0.92
HCG18-244ENST00000602516 IL16Q14005 1332 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 TXNDC2Q86VQ3 553 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
HCG18-244ENST00000602516 POLKQ9UBT6 870 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 PCDHB8Q9UN66 801 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 PCDHB13Q9Y5F0 798 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 PLEKHG1Q9ULL1 1385 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 TOPAZ1Q8N9V7 1692 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 CCDC189A1A4V9 331 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
HCG18-244ENST00000602516 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 DONSONQ9NYP3 566 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
HCG18-244ENST00000602516 SMC3Q9UQE7 1217 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 SUGT1Q9Y2Z0 365 aa9.29□□□□□ -0.92
HCG18-244ENST00000602516 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms