RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 C10orf71Q711Q0 1435 aa25.53■■□□□ 1.68
IRF3-231ENST00000602190 N4BP2Q86UW6 1770 aaPredicted RBP25.52■■□□□ 1.68
IRF3-231ENST00000602190 PHKG2P15735 406 aa25.52■■□□□ 1.68
IRF3-231ENST00000602190 ATG3Q9NT62 314 aa25.5■■□□□ 1.67
IRF3-231ENST00000602190 TMOD3Q9NYL9 352 aa25.5■■□□□ 1.67
IRF3-231ENST00000602190 C4AP0C0L4 1744 aa25.49■■□□□ 1.67
IRF3-231ENST00000602190 GNPATO15228 680 aa25.49■■□□□ 1.67
IRF3-231ENST00000602190 IFNL2Q8IZJ0 200 aa25.49■■□□□ 1.67
IRF3-231ENST00000602190 POLKQ9UBT6 870 aa25.49■■□□□ 1.67
IRF3-231ENST00000602190 MYH14Q7Z406 1995 aaKnown RBP25.49■■□□□ 1.67
IRF3-231ENST00000602190 SLC4A9Q96Q91 983 aa25.48■■□□□ 1.67
IRF3-231ENST00000602190 ARFGEF1Q9Y6D6 1849 aa25.48■■□□□ 1.67
IRF3-231ENST00000602190 ZNF526Q8TF50 670 aaPredicted RBP25.47■■□□□ 1.67
IRF3-231ENST00000602190 MMP10P09238 476 aa25.46■■□□□ 1.67
IRF3-231ENST00000602190 ATP6V1AP38606 617 aa25.46■■□□□ 1.67
IRF3-231ENST00000602190 TGFB2P61812 414 aa25.46■■□□□ 1.67
IRF3-231ENST00000602190 RC3H1Q5TC82 1133 aaKnown RBP25.44■■□□□ 1.66
IRF3-231ENST00000602190 CNTNAP4Q9C0A0 1308 aa25.43■■□□□ 1.66
IRF3-231ENST00000602190 ADRA2BP18089 450 aa25.43■■□□□ 1.66
IRF3-231ENST00000602190 WWC3Q9ULE0 1092 aa25.43■■□□□ 1.66
IRF3-231ENST00000602190 EIF4A2Q14240 407 aaKnown RBP25.42■■□□□ 1.66
IRF3-231ENST00000602190 KDM6AO15550 1401 aaPredicted RBP25.41■■□□□ 1.66
IRF3-231ENST00000602190 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
IRF3-231ENST00000602190 NLGN1Q8N2Q7 840 aa25.41■■□□□ 1.66
IRF3-231ENST00000602190 ADAMTS7Q9UKP4 1686 aa25.41■■□□□ 1.66
IRF3-231ENST00000602190 PPM1GO15355 546 aaPredicted RBP25.39■■□□□ 1.66
IRF3-231ENST00000602190 GYS1P13807 737 aa25.39■■□□□ 1.66
IRF3-231ENST00000602190 DNAJC5GQ8N7S2 189 aa25.39■■□□□ 1.66
IRF3-231ENST00000602190 RTCBQ9Y3I0 505 aaKnown RBP25.39■■□□□ 1.66
IRF3-231ENST00000602190 TJP1Q07157 1748 aa25.37■■□□□ 1.65
IRF3-231ENST00000602190 TOMM70O94826 608 aa25.37■■□□□ 1.65
IRF3-231ENST00000602190 KCNA3P22001 575 aa25.37■■□□□ 1.65
IRF3-231ENST00000602190 TRAPPC3LQ5T215 181 aa25.37■■□□□ 1.65
IRF3-231ENST00000602190 ARHGEF1Q92888 912 aaKnown RBP25.37■■□□□ 1.65
IRF3-231ENST00000602190 RPS6KA4O75676 772 aa25.36■■□□□ 1.65
IRF3-231ENST00000602190 APLP1P51693 650 aa25.36■■□□□ 1.65
IRF3-231ENST00000602190 DCAF5Q96JK2 942 aa25.36■■□□□ 1.65
IRF3-231ENST00000602190 WDR90Q96KV7 1748 aa25.36■■□□□ 1.65
IRF3-231ENST00000602190 A0A0G2JLW4 131 aa25.35■■□□□ 1.65
IRF3-231ENST00000602190 HSP90AB1P08238 724 aaKnown RBP25.33■■□□□ 1.65
IRF3-231ENST00000602190 DPEP1P16444 411 aa25.33■■□□□ 1.65
IRF3-231ENST00000602190 BCS1LQ9Y276 419 aa25.33■■□□□ 1.65
IRF3-231ENST00000602190 SBF1O95248 1867 aa25.32■■□□□ 1.64
IRF3-231ENST00000602190 SCN11AQ9UI33 1791 aa25.32■■□□□ 1.64
IRF3-231ENST00000602190 CCDC87Q9NVE4 849 aa25.32■■□□□ 1.64
IRF3-231ENST00000602190 TIMELESSQ9UNS1 1208 aa25.3■■□□□ 1.64
IRF3-231ENST00000602190 NMRK2Q9NPI5 230 aa25.29■■□□□ 1.64
IRF3-231ENST00000602190 TNRC6CQ9HCJ0 1690 aaKnown RBP25.28■■□□□ 1.64
IRF3-231ENST00000602190 NRXN2Q9P2S2 1712 aa25.28■■□□□ 1.64
IRF3-231ENST00000602190 RFC4P35249 363 aa25.27■■□□□ 1.64
IRF3-231ENST00000602190 AMOTQ4VCS5 1084 aa25.27■■□□□ 1.64
IRF3-231ENST00000602190 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
IRF3-231ENST00000602190 RBM46Q8TBY0 533 aaKnown RBP25.27■■□□□ 1.64
IRF3-231ENST00000602190 RBM42Q9BTD8 480 aaKnown RBP25.27■■□□□ 1.64
IRF3-231ENST00000602190 USP42Q9H9J4 1324 aaKnown RBP25.27■■□□□ 1.64
IRF3-231ENST00000602190 FCHSD2O94868 740 aa25.26■■□□□ 1.63
IRF3-231ENST00000602190 ARHGAP27Q6ZUM4 889 aa25.26■■□□□ 1.63
IRF3-231ENST00000602190 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
IRF3-231ENST00000602190 DDR1Q08345 913 aa25.25■■□□□ 1.63
IRF3-231ENST00000602190 DLEC1Q9Y238 1755 aa25.25■■□□□ 1.63
IRF3-231ENST00000602190 CRKLP46109 303 aaKnown RBP25.24■■□□□ 1.63
IRF3-231ENST00000602190 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
IRF3-231ENST00000602190 MRC1P22897 1456 aa25.23■■□□□ 1.63
IRF3-231ENST00000602190 C9orf131Q5VYM1 1079 aa25.23■■□□□ 1.63
IRF3-231ENST00000602190 AFDNP55196 1824 aaKnown RBP25.22■■□□□ 1.63
IRF3-231ENST00000602190 VIRMAQ69YN4 1812 aaKnown RBP25.22■■□□□ 1.63
IRF3-231ENST00000602190 CABP4P57796 275 aa25.22■■□□□ 1.63
IRF3-231ENST00000602190 FKBP8Q14318 412 aa25.22■■□□□ 1.63
IRF3-231ENST00000602190 PIM2Q9P1W9 311 aa25.22■■□□□ 1.63
IRF3-231ENST00000602190 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
IRF3-231ENST00000602190 TM4SF1P30408 202 aa25.21■■□□□ 1.63
IRF3-231ENST00000602190 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
IRF3-231ENST00000602190 FSTL1Q12841 308 aa25.2■■□□□ 1.62
IRF3-231ENST00000602190 INTS5Q6P9B9 1019 aaKnown RBP25.2■■□□□ 1.62
IRF3-231ENST00000602190 AEBP1Q8IUX7 1158 aa25.2■■□□□ 1.62
IRF3-231ENST00000602190 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
IRF3-231ENST00000602190 TNNT2P45379 298 aaPredicted RBP25.19■■□□□ 1.62
IRF3-231ENST00000602190 POLRMTO00411 1230 aaKnown RBP25.18■■□□□ 1.62
IRF3-231ENST00000602190 MTHFSP49914 203 aa25.18■■□□□ 1.62
IRF3-231ENST00000602190 NFATC2IPQ8NCF5 419 aa25.18■■□□□ 1.62
IRF3-231ENST00000602190 PTCD1O75127 700 aaKnown RBP25.17■■□□□ 1.62
IRF3-231ENST00000602190 DALRD3Q5D0E6 543 aaKnown RBP25.17■■□□□ 1.62
IRF3-231ENST00000602190 ZC3H4Q9UPT8 1303 aaKnown RBP25.16■■□□□ 1.62
IRF3-231ENST00000602190 KLRG1Q96E93 195 aa25.16■■□□□ 1.62
IRF3-231ENST00000602190 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
IRF3-231ENST00000602190 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
IRF3-231ENST00000602190 SOS1Q07889 1333 aaPredicted RBP25.14■■□□□ 1.62
IRF3-231ENST00000602190 KDM2BQ8NHM5 1336 aa25.14■■□□□ 1.62
IRF3-231ENST00000602190 C1orf141Q5JVX7 400 aa25.14■■□□□ 1.62
IRF3-231ENST00000602190 PANK3Q9H999 370 aa25.14■■□□□ 1.62
IRF3-231ENST00000602190 CHRNA5P30532 468 aa25.13■■□□□ 1.61
IRF3-231ENST00000602190 IL13P35225 146 aa25.13■■□□□ 1.61
IRF3-231ENST00000602190 RNF181Q9P0P0 153 aa25.12■■□□□ 1.61
IRF3-231ENST00000602190 TIAM2Q8IVF5 1701 aa25.1■■□□□ 1.61
IRF3-231ENST00000602190 SULT6B1Q6IMI4 303 aa25.1■■□□□ 1.61
IRF3-231ENST00000602190 CYP19A1P11511 503 aaPredicted RBP25.09■■□□□ 1.61
IRF3-231ENST00000602190 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
IRF3-231ENST00000602190 AKAP4Q5JQC9 854 aa25.09■■□□□ 1.61
IRF3-231ENST00000602190 DNAJC10Q8IXB1 793 aa25.09■■□□□ 1.61
IRF3-231ENST00000602190 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms