RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
GTPBP3-228ENST00000602165 AK7Q96M32 723 aa24.69■■□□□ 1.54
GTPBP3-228ENST00000602165 ZNF831Q5JPB2 1677 aa24.69■■□□□ 1.54
GTPBP3-228ENST00000602165 ATP6V1AP38606 617 aa24.68■■□□□ 1.54
GTPBP3-228ENST00000602165 ITPK1Q13572 414 aa24.68■■□□□ 1.54
GTPBP3-228ENST00000602165 COL5A3P25940 1745 aaPredicted RBP24.67■■□□□ 1.54
GTPBP3-228ENST00000602165 POLD1P28340 1107 aa24.67■■□□□ 1.54
GTPBP3-228ENST00000602165 AMIGO3Q86WK7 504 aa24.67■■□□□ 1.54
GTPBP3-228ENST00000602165 SYT17Q9BSW7 474 aa24.67■■□□□ 1.54
GTPBP3-228ENST00000602165 U2SURPO15042 1029 aaKnown RBP24.66■■□□□ 1.54
GTPBP3-228ENST00000602165 PHF14O94880 888 aa24.65■■□□□ 1.54
GTPBP3-228ENST00000602165 AKAP4Q5JQC9 854 aa24.65■■□□□ 1.54
GTPBP3-228ENST00000602165 MSL1Q68DK7 614 aa24.65■■□□□ 1.54
GTPBP3-228ENST00000602165 SMIM5Q71RC9 77 aa24.65■■□□□ 1.54
GTPBP3-228ENST00000602165 RBM42Q9BTD8 480 aaKnown RBP24.65■■□□□ 1.54
GTPBP3-228ENST00000602165 NFATC2IPQ8NCF5 419 aa24.64■■□□□ 1.54
GTPBP3-228ENST00000602165 FLAD1Q8NFF5 587 aa24.64■■□□□ 1.54
GTPBP3-228ENST00000602165 KLHL34Q8N239 644 aa24.63■■□□□ 1.53
GTPBP3-228ENST00000602165 SLC4A9Q96Q91 983 aa24.63■■□□□ 1.53
GTPBP3-228ENST00000602165 ADAMTS7Q9UKP4 1686 aa24.62■■□□□ 1.53
GTPBP3-228ENST00000602165 DCAF8L1A6NGE4 600 aa24.62■■□□□ 1.53
GTPBP3-228ENST00000602165 MTHFSDQ2M296 383 aaKnown RBP24.62■■□□□ 1.53
GTPBP3-228ENST00000602165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.61■■□□□ 1.53
GTPBP3-228ENST00000602165 PPP2R1AP30153 589 aa24.61■■□□□ 1.53
GTPBP3-228ENST00000602165 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
GTPBP3-228ENST00000602165 LGR6Q9HBX8 967 aa24.61■■□□□ 1.53
GTPBP3-228ENST00000602165 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
GTPBP3-228ENST00000602165 MYH14Q7Z406 1995 aaKnown RBP24.6■■□□□ 1.53
GTPBP3-228ENST00000602165 MRC1P22897 1456 aa24.6■■□□□ 1.53
GTPBP3-228ENST00000602165 GNPATO15228 680 aa24.6■■□□□ 1.53
GTPBP3-228ENST00000602165 TJP1Q07157 1748 aa24.6■■□□□ 1.53
GTPBP3-228ENST00000602165 RNMTO43148 476 aaKnown RBP24.58■■□□□ 1.53
GTPBP3-228ENST00000602165 PTCD1O75127 700 aaKnown RBP24.58■■□□□ 1.53
GTPBP3-228ENST00000602165 SSFA2P28290 1259 aa24.58■■□□□ 1.53
GTPBP3-228ENST00000602165 SLC52A2Q9HAB3 445 aa24.57■■□□□ 1.52
GTPBP3-228ENST00000602165 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
GTPBP3-228ENST00000602165 C4AP0C0L4 1744 aa24.54■■□□□ 1.52
GTPBP3-228ENST00000602165 SIPA1L3O60292 1781 aaPredicted RBP24.53■■□□□ 1.52
GTPBP3-228ENST00000602165 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 NLGN2Q8NFZ4 835 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 RSPH6AQ9H0K4 717 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 NUDCQ9Y266 331 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 RTCBQ9Y3I0 505 aaKnown RBP24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 CNTNAP4Q9C0A0 1308 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 UBR2Q8IWV8 1755 aa24.52■■□□□ 1.52
GTPBP3-228ENST00000602165 SLC39A6Q13433 755 aa24.51■■□□□ 1.51
GTPBP3-228ENST00000602165 RC3H1Q5TC82 1133 aaKnown RBP24.51■■□□□ 1.51
GTPBP3-228ENST00000602165 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
GTPBP3-228ENST00000602165 CHD4Q14839 1912 aa24.51■■□□□ 1.51
GTPBP3-228ENST00000602165 KCPQ6ZWJ8 1503 aa24.51■■□□□ 1.51
GTPBP3-228ENST00000602165 UTRNP46939 3433 aa24.5■■□□□ 1.51
GTPBP3-228ENST00000602165 U2AF1L5P0DN76 240 aaPredicted RBP24.5■■□□□ 1.51
GTPBP3-228ENST00000602165 U2AF1Q01081 240 aaKnown RBP eCLIP24.5■■□□□ 1.51
GTPBP3-228ENST00000602165 PHACTR3Q96KR7 559 aa24.5■■□□□ 1.51
GTPBP3-228ENST00000602165 GNAT3A8MTJ3 354 aa24.49■■□□□ 1.51
GTPBP3-228ENST00000602165 YY1P25490 414 aa24.49■■□□□ 1.51
GTPBP3-228ENST00000602165 CRKLP46109 303 aaKnown RBP24.48■■□□□ 1.51
GTPBP3-228ENST00000602165 TRAPPC3LQ5T215 181 aa24.48■■□□□ 1.51
GTPBP3-228ENST00000602165 RPS6KA4O75676 772 aa24.47■■□□□ 1.51
GTPBP3-228ENST00000602165 IL17REQ8NFR9 667 aa24.46■■□□□ 1.51
GTPBP3-228ENST00000602165 ARHGEF1Q92888 912 aaKnown RBP24.46■■□□□ 1.51
GTPBP3-228ENST00000602165 GPR162Q16538 588 aa24.45■■□□□ 1.5
GTPBP3-228ENST00000602165 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.5
GTPBP3-228ENST00000602165 PELP1Q8IZL8 1130 aaKnown RBP24.45■■□□□ 1.5
GTPBP3-228ENST00000602165 GOLGB1Q14789 3259 aaKnown RBP24.45■■□□□ 1.5
GTPBP3-228ENST00000602165 ADRA2BP18089 450 aa24.44■■□□□ 1.5
GTPBP3-228ENST00000602165 TEFQ10587 303 aa24.44■■□□□ 1.5
GTPBP3-228ENST00000602165 RFC4P35249 363 aa24.43■■□□□ 1.5
GTPBP3-228ENST00000602165 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
GTPBP3-228ENST00000602165 DLG5Q8TDM6 1919 aa24.43■■□□□ 1.5
GTPBP3-228ENST00000602165 FCHSD2O94868 740 aa24.42■■□□□ 1.5
GTPBP3-228ENST00000602165 CD2APQ9Y5K6 639 aa24.42■■□□□ 1.5
GTPBP3-228ENST00000602165 MMP10P09238 476 aa24.41■■□□□ 1.5
GTPBP3-228ENST00000602165 INTS5Q6P9B9 1019 aaKnown RBP24.41■■□□□ 1.5
GTPBP3-228ENST00000602165 CEMIPQ8WUJ3 1361 aa24.41■■□□□ 1.5
GTPBP3-228ENST00000602165 TTC5Q8N0Z6 440 aa24.4■■□□□ 1.5
GTPBP3-228ENST00000602165 CCDC87Q9NVE4 849 aa24.4■■□□□ 1.5
GTPBP3-228ENST00000602165 KIF13BQ9NQT8 1826 aa24.4■■□□□ 1.5
GTPBP3-228ENST00000602165 CYP19A1P11511 503 aaPredicted RBP24.39■■□□□ 1.49
GTPBP3-228ENST00000602165 GYS1P13807 737 aa24.39■■□□□ 1.49
GTPBP3-228ENST00000602165 NLGN1Q8N2Q7 840 aa24.38■■□□□ 1.49
GTPBP3-228ENST00000602165 SRP68Q9UHB9 627 aaKnown RBP24.38■■□□□ 1.49
GTPBP3-228ENST00000602165 ZNF790Q6PG37 636 aa24.37■■□□□ 1.49
GTPBP3-228ENST00000602165 YBX3P16989 372 aaKnown RBP eCLIP24.36■■□□□ 1.497e-7■■■■□ 21.8
GTPBP3-228ENST00000602165 VSIG10Q8N0Z9 540 aa24.36■■□□□ 1.49
GTPBP3-228ENST00000602165 ZNF496Q96IT1 587 aaPredicted RBP24.36■■□□□ 1.49
GTPBP3-228ENST00000602165 N4BP2Q86UW6 1770 aaPredicted RBP24.36■■□□□ 1.49
GTPBP3-228ENST00000602165 USP42Q9H9J4 1324 aaKnown RBP24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 RALBP1Q15311 655 aa24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 MCM10Q7L590 875 aa24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 RTF1Q92541 710 aaKnown RBP24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 ZBTB1Q9Y2K1 713 aa24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 KIAA1551Q9HCM1 1747 aa24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 SOS1Q07889 1333 aaPredicted RBP24.35■■□□□ 1.49
GTPBP3-228ENST00000602165 HEG1Q9ULI3 1381 aa24.34■■□□□ 1.49
GTPBP3-228ENST00000602165 BTBD11A6QL63 1104 aa24.33■■□□□ 1.49
GTPBP3-228ENST00000602165 DCTN1Q14203 1278 aa24.33■■□□□ 1.49
GTPBP3-228ENST00000602165 COL15A1P39059 1388 aa24.32■■□□□ 1.48
GTPBP3-228ENST00000602165 KCNQ3O43525 872 aa24.32■■□□□ 1.48
GTPBP3-228ENST00000602165 WWC3Q9ULE0 1092 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms