RNA–Protein interactions for RNA: ENST00000600397.1

ZNF552-204, Transcript of zinc finger protein 552, humanhuman

TSL 2

Gene ZNF552, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF552-204ENST00000600397 MSH5O43196 834 aa20.74■□□□□ 0.91
ZNF552-204ENST00000600397 CABP4P57796 275 aa20.74■□□□□ 0.91
ZNF552-204ENST00000600397 AKAP4Q5JQC9 854 aa20.74■□□□□ 0.91
ZNF552-204ENST00000600397 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
ZNF552-204ENST00000600397 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
ZNF552-204ENST00000600397 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
ZNF552-204ENST00000600397 COL3A1P02461 1466 aaPredicted RBP20.71■□□□□ 0.91
ZNF552-204ENST00000600397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.71■□□□□ 0.91
ZNF552-204ENST00000600397 ADRA2BP18089 450 aa20.7■□□□□ 0.9
ZNF552-204ENST00000600397 YY1P25490 414 aa20.7■□□□□ 0.9
ZNF552-204ENST00000600397 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
ZNF552-204ENST00000600397 CICQ96RK0 1608 aaPredicted RBP20.7■□□□□ 0.9
ZNF552-204ENST00000600397 MRC1P22897 1456 aa20.69■□□□□ 0.9
ZNF552-204ENST00000600397 ITPK1Q13572 414 aa20.69■□□□□ 0.9
ZNF552-204ENST00000600397 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
ZNF552-204ENST00000600397 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
ZNF552-204ENST00000600397 GNPATO15228 680 aa20.67■□□□□ 0.9
ZNF552-204ENST00000600397 CD2APQ9Y5K6 639 aa20.67■□□□□ 0.9
ZNF552-204ENST00000600397 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
ZNF552-204ENST00000600397 NFATC2IPQ8NCF5 419 aa20.66■□□□□ 0.9
ZNF552-204ENST00000600397 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
ZNF552-204ENST00000600397 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
ZNF552-204ENST00000600397 COL5A3P25940 1745 aaPredicted RBP20.65■□□□□ 0.9
ZNF552-204ENST00000600397 PHF14O94880 888 aa20.65■□□□□ 0.9
ZNF552-204ENST00000600397 HMOX1P09601 288 aa20.65■□□□□ 0.9
ZNF552-204ENST00000600397 SLC52A2Q9HAB3 445 aa20.65■□□□□ 0.9
ZNF552-204ENST00000600397 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
ZNF552-204ENST00000600397 AMIGO3Q86WK7 504 aa20.64■□□□□ 0.89
ZNF552-204ENST00000600397 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
ZNF552-204ENST00000600397 KLHL34Q8N239 644 aa20.63■□□□□ 0.89
ZNF552-204ENST00000600397 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
ZNF552-204ENST00000600397 SLC4A9Q96Q91 983 aa20.63■□□□□ 0.89
ZNF552-204ENST00000600397 GPR162Q16538 588 aa20.62■□□□□ 0.89
ZNF552-204ENST00000600397 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
ZNF552-204ENST00000600397 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
ZNF552-204ENST00000600397 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
ZNF552-204ENST00000600397 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
ZNF552-204ENST00000600397 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
ZNF552-204ENST00000600397 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
ZNF552-204ENST00000600397 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
ZNF552-204ENST00000600397 UTRNP46939 3433 aa20.6■□□□□ 0.89
ZNF552-204ENST00000600397 GRIN3BO60391 1043 aa20.59■□□□□ 0.89
ZNF552-204ENST00000600397 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
ZNF552-204ENST00000600397 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
ZNF552-204ENST00000600397 NLGN2Q8NFZ4 835 aa20.59■□□□□ 0.89
ZNF552-204ENST00000600397 PPP2R1AP30153 589 aa20.58■□□□□ 0.89
ZNF552-204ENST00000600397 GNAT3A8MTJ3 354 aa20.57■□□□□ 0.88
ZNF552-204ENST00000600397 RFC4P35249 363 aa20.57■□□□□ 0.88
ZNF552-204ENST00000600397 LGR6Q9HBX8 967 aa20.57■□□□□ 0.88
ZNF552-204ENST00000600397 TJP1Q07157 1748 aa20.56■□□□□ 0.88
ZNF552-204ENST00000600397 CRKLP46109 303 aaKnown RBP20.56■□□□□ 0.88
ZNF552-204ENST00000600397 CHD4Q14839 1912 aa20.55■□□□□ 0.88
ZNF552-204ENST00000600397 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
ZNF552-204ENST00000600397 KCPQ6ZWJ8 1503 aa20.54■□□□□ 0.88
ZNF552-204ENST00000600397 FCHSD2O94868 740 aa20.54■□□□□ 0.88
ZNF552-204ENST00000600397 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
ZNF552-204ENST00000600397 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
ZNF552-204ENST00000600397 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
ZNF552-204ENST00000600397 MMP10P09238 476 aa20.53■□□□□ 0.88
ZNF552-204ENST00000600397 TEFQ10587 303 aa20.53■□□□□ 0.88
ZNF552-204ENST00000600397 GYS1P13807 737 aa20.52■□□□□ 0.88
ZNF552-204ENST00000600397 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
ZNF552-204ENST00000600397 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
ZNF552-204ENST00000600397 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
ZNF552-204ENST00000600397 CCDC87Q9NVE4 849 aa20.52■□□□□ 0.88
ZNF552-204ENST00000600397 USP42Q9H9J4 1324 aaKnown RBP20.52■□□□□ 0.87
ZNF552-204ENST00000600397 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
ZNF552-204ENST00000600397 C4AP0C0L4 1744 aa20.51■□□□□ 0.87
ZNF552-204ENST00000600397 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
ZNF552-204ENST00000600397 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 CYP19A1P11511 503 aaPredicted RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
ZNF552-204ENST00000600397 TGFB2P61812 414 aa20.49■□□□□ 0.87
ZNF552-204ENST00000600397 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
ZNF552-204ENST00000600397 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
ZNF552-204ENST00000600397 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
ZNF552-204ENST00000600397 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
ZNF552-204ENST00000600397 SOS1Q07889 1333 aaPredicted RBP20.49■□□□□ 0.87
ZNF552-204ENST00000600397 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
ZNF552-204ENST00000600397 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
ZNF552-204ENST00000600397 STARD3NLO95772 234 aa20.48■□□□□ 0.87
ZNF552-204ENST00000600397 YBX3P16989 372 aaKnown RBP eCLIP20.48■□□□□ 0.87
ZNF552-204ENST00000600397 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
ZNF552-204ENST00000600397 ZNF784Q8NCA9 323 aaPredicted RBP20.48■□□□□ 0.87
ZNF552-204ENST00000600397 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
ZNF552-204ENST00000600397 SIPA1L3O60292 1781 aaPredicted RBP20.46■□□□□ 0.87
ZNF552-204ENST00000600397 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
ZNF552-204ENST00000600397 ZPR1O75312 459 aa20.45■□□□□ 0.86
ZNF552-204ENST00000600397 NEFMP07197 916 aa20.45■□□□□ 0.86
ZNF552-204ENST00000600397 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
ZNF552-204ENST00000600397 COL15A1P39059 1388 aa20.45■□□□□ 0.86
ZNF552-204ENST00000600397 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
ZNF552-204ENST00000600397 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
ZNF552-204ENST00000600397 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
ZNF552-204ENST00000600397 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms