RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 NUDCQ9Y266 331 aa25.58■■□□□ 1.69
RAB4B-206ENST00000600078 KDRP35968 1356 aa25.57■■□□□ 1.68
RAB4B-206ENST00000600078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.57■■□□□ 1.68
RAB4B-206ENST00000600078 SPG7Q9UQ90 795 aa25.57■■□□□ 1.68
RAB4B-206ENST00000600078 PLEKHG2Q9H7P9 1386 aa25.56■■□□□ 1.68
RAB4B-206ENST00000600078 HMOX1P09601 288 aa25.56■■□□□ 1.68
RAB4B-206ENST00000600078 PCDH11XQ9BZA7 1347 aa25.56■■□□□ 1.68
RAB4B-206ENST00000600078 PCDH11YQ9BZA8 1340 aa25.56■■□□□ 1.68
RAB4B-206ENST00000600078 PKD1L3Q7Z443 1732 aa25.54■■□□□ 1.68
RAB4B-206ENST00000600078 TOGARAM1Q9Y4F4 1720 aa25.54■■□□□ 1.68
RAB4B-206ENST00000600078 CICQ96RK0 1608 aaPredicted RBP25.53■■□□□ 1.68
RAB4B-206ENST00000600078 APLP1P51693 650 aa25.53■■□□□ 1.68
RAB4B-206ENST00000600078 PLEKHO1Q53GL0 409 aaPredicted RBP25.53■■□□□ 1.68
RAB4B-206ENST00000600078 CYP27B1O15528 508 aa25.51■■□□□ 1.67
RAB4B-206ENST00000600078 AMOTQ4VCS5 1084 aa25.51■■□□□ 1.67
RAB4B-206ENST00000600078 WWC3Q9ULE0 1092 aa25.51■■□□□ 1.67
RAB4B-206ENST00000600078 ANP32CO43423 234 aa25.5■■□□□ 1.67
RAB4B-206ENST00000600078 C4BP0C0L5 1744 aa25.5■■□□□ 1.67
RAB4B-206ENST00000600078 U2AF1L5P0DN76 240 aaPredicted RBP25.5■■□□□ 1.67
RAB4B-206ENST00000600078 U2AF1Q01081 240 aaKnown RBP eCLIP25.5■■□□□ 1.67
RAB4B-206ENST00000600078 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
RAB4B-206ENST00000600078 DNAJC5GQ8N7S2 189 aa25.49■■□□□ 1.67
RAB4B-206ENST00000600078 IFNL2Q8IZJ0 200 aa25.48■■□□□ 1.67
RAB4B-206ENST00000600078 UBR3Q6ZT12 1888 aa25.48■■□□□ 1.67
RAB4B-206ENST00000600078 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
RAB4B-206ENST00000600078 PHKG2P15735 406 aa25.46■■□□□ 1.67
RAB4B-206ENST00000600078 ZNF530Q6P9A1 599 aaPredicted RBP25.46■■□□□ 1.67
RAB4B-206ENST00000600078 NKX1-1Q15270 411 aaPredicted RBP25.45■■□□□ 1.66
RAB4B-206ENST00000600078 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
RAB4B-206ENST00000600078 FCHSD2O94868 740 aa25.44■■□□□ 1.66
RAB4B-206ENST00000600078 RSPH6AQ9H0K4 717 aa25.44■■□□□ 1.66
RAB4B-206ENST00000600078 AMIGO3Q86WK7 504 aa25.43■■□□□ 1.66
RAB4B-206ENST00000600078 PRKAR2BP31323 418 aa25.42■■□□□ 1.66
RAB4B-206ENST00000600078 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
RAB4B-206ENST00000600078 TOMM70O94826 608 aa25.41■■□□□ 1.66
RAB4B-206ENST00000600078 HSP90AB1P08238 724 aaKnown RBP25.41■■□□□ 1.66
RAB4B-206ENST00000600078 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
RAB4B-206ENST00000600078 ITGB4P16144 1822 aa25.4■■□□□ 1.66
RAB4B-206ENST00000600078 HMGB2P26583 209 aaKnown RBP25.4■■□□□ 1.66
RAB4B-206ENST00000600078 MTHFSDQ2M296 383 aaKnown RBP25.39■■□□□ 1.66
RAB4B-206ENST00000600078 AK7Q96M32 723 aa25.39■■□□□ 1.66
RAB4B-206ENST00000600078 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
RAB4B-206ENST00000600078 AKAP4Q5JQC9 854 aa25.38■■□□□ 1.65
RAB4B-206ENST00000600078 PHF14O94880 888 aa25.37■■□□□ 1.65
RAB4B-206ENST00000600078 SMIM5Q71RC9 77 aa25.37■■□□□ 1.65
RAB4B-206ENST00000600078 DCAF5Q96JK2 942 aa25.37■■□□□ 1.65
RAB4B-206ENST00000600078 COL13A1Q5TAT6 717 aaPredicted RBP25.36■■□□□ 1.65
RAB4B-206ENST00000600078 GAS2L2Q8NHY3 880 aa25.36■■□□□ 1.65
RAB4B-206ENST00000600078 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
RAB4B-206ENST00000600078 PNNQ9H307 717 aaKnown RBP25.36■■□□□ 1.65
RAB4B-206ENST00000600078 PXDNLA1KZ92 1463 aa25.35■■□□□ 1.65
RAB4B-206ENST00000600078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.35■■□□□ 1.65
RAB4B-206ENST00000600078 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
RAB4B-206ENST00000600078 N4BP2Q86UW6 1770 aaPredicted RBP25.35■■□□□ 1.65
RAB4B-206ENST00000600078 NEFMP07197 916 aa25.34■■□□□ 1.65
RAB4B-206ENST00000600078 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
RAB4B-206ENST00000600078 NMRK2Q9NPI5 230 aa25.33■■□□□ 1.65
RAB4B-206ENST00000600078 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
RAB4B-206ENST00000600078 KDM6AO15550 1401 aaPredicted RBP25.31■■□□□ 1.64
RAB4B-206ENST00000600078 SSFA2P28290 1259 aa25.31■■□□□ 1.64
RAB4B-206ENST00000600078 CCDC184Q52MB2 194 aa25.31■■□□□ 1.64
RAB4B-206ENST00000600078 PLEKHF1Q96S99 279 aa25.31■■□□□ 1.64
RAB4B-206ENST00000600078 CAPN15O75808 1086 aa25.3■■□□□ 1.64
RAB4B-206ENST00000600078 SMARCC1Q92922 1105 aaPredicted RBP25.3■■□□□ 1.64
RAB4B-206ENST00000600078 KLRG1Q96E93 195 aa25.3■■□□□ 1.64
RAB4B-206ENST00000600078 TMOD3Q9NYL9 352 aa25.3■■□□□ 1.64
RAB4B-206ENST00000600078 JMYQ8N9B5 988 aa25.29■■□□□ 1.64
RAB4B-206ENST00000600078 PIGBQ92521 554 aa25.29■■□□□ 1.64
RAB4B-206ENST00000600078 GNAT3A8MTJ3 354 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
RAB4B-206ENST00000600078 CABP4P57796 275 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 HTRA3P83110 453 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 RBM46Q8TBY0 533 aaKnown RBP25.28■■□□□ 1.64
RAB4B-206ENST00000600078 LGR6Q9HBX8 967 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 MRS2Q9HD23 443 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 MAPK8IP3Q9UPT6 1336 aa25.28■■□□□ 1.64
RAB4B-206ENST00000600078 BRCA1P38398 1863 aaKnown RBP25.28■■□□□ 1.64
RAB4B-206ENST00000600078 SCN11AQ9UI33 1791 aa25.26■■□□□ 1.63
RAB4B-206ENST00000600078 LINC00116Q8NCU8 138 aa25.26■■□□□ 1.63
RAB4B-206ENST00000600078 BCS1LQ9Y276 419 aa25.26■■□□□ 1.63
RAB4B-206ENST00000600078 C10orf71Q711Q0 1435 aa25.24■■□□□ 1.63
RAB4B-206ENST00000600078 MMP10P09238 476 aa25.24■■□□□ 1.63
RAB4B-206ENST00000600078 TNS4Q8IZW8 715 aa25.24■■□□□ 1.63
RAB4B-206ENST00000600078 NFATC2IPQ8NCF5 419 aa25.23■■□□□ 1.63
RAB4B-206ENST00000600078 PRELPP51888 382 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 TGFB2P61812 414 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 NFE2L2Q16236 605 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 DIEXFQ68CQ4 756 aaKnown RBP25.22■■□□□ 1.63
RAB4B-206ENST00000600078 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 IL17REQ8NFR9 667 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 RTF1Q92541 710 aaKnown RBP25.22■■□□□ 1.63
RAB4B-206ENST00000600078 RUNDC1Q96C34 613 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 SLC52A2Q9HAB3 445 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 ADAMTS7Q9UKP4 1686 aa25.22■■□□□ 1.63
RAB4B-206ENST00000600078 VIRMAQ69YN4 1812 aaKnown RBP25.21■■□□□ 1.63
RAB4B-206ENST00000600078 ARFGEF1Q9Y6D6 1849 aa25.21■■□□□ 1.63
RAB4B-206ENST00000600078 LOC102724428A0A0B4J2F2 783 aa25.21■■□□□ 1.63
RAB4B-206ENST00000600078 A0A0G2JLW4 131 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms