RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 PIM2Q9P1W9 311 aa19.46■□□□□ 0.71
HOMER3-212ENST00000600077 RTL1A6NKG5 1358 aa19.45■□□□□ 0.7
HOMER3-212ENST00000600077 PIGBQ92521 554 aa19.45■□□□□ 0.7
HOMER3-212ENST00000600077 TRAPPC3LQ5T215 181 aa19.44■□□□□ 0.7
HOMER3-212ENST00000600077 DCAF5Q96JK2 942 aa19.44■□□□□ 0.7
HOMER3-212ENST00000600077 ZC3H4Q9UPT8 1303 aaKnown RBP19.44■□□□□ 0.7
HOMER3-212ENST00000600077 ARFGEF1Q9Y6D6 1849 aa19.44■□□□□ 0.7
HOMER3-212ENST00000600077 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
HOMER3-212ENST00000600077 DALRD3Q5D0E6 543 aaKnown RBP19.43■□□□□ 0.7
HOMER3-212ENST00000600077 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
HOMER3-212ENST00000600077 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
HOMER3-212ENST00000600077 BRCA1P38398 1863 aaKnown RBP19.43■□□□□ 0.7
HOMER3-212ENST00000600077 ITGB4P16144 1822 aa19.42■□□□□ 0.7
HOMER3-212ENST00000600077 CYP27B1O15528 508 aa19.42■□□□□ 0.7
HOMER3-212ENST00000600077 VEGFAP15692 232 aaPredicted RBP19.42■□□□□ 0.7
HOMER3-212ENST00000600077 ATP6V1AP38606 617 aa19.42■□□□□ 0.7
HOMER3-212ENST00000600077 RTCBQ9Y3I0 505 aaKnown RBP19.42■□□□□ 0.7
HOMER3-212ENST00000600077 KCNA3P22001 575 aa19.41■□□□□ 0.7
HOMER3-212ENST00000600077 L3MBTL2Q969R5 705 aa19.41■□□□□ 0.7
HOMER3-212ENST00000600077 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
HOMER3-212ENST00000600077 ADRA2BP18089 450 aa19.4■□□□□ 0.7
HOMER3-212ENST00000600077 PUS7Q96PZ0 661 aaKnown RBP19.4■□□□□ 0.7
HOMER3-212ENST00000600077 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
HOMER3-212ENST00000600077 ITPK1Q13572 414 aa19.39■□□□□ 0.69
HOMER3-212ENST00000600077 NKX1-1Q15270 411 aaPredicted RBP19.39■□□□□ 0.69
HOMER3-212ENST00000600077 C4AP0C0L4 1744 aa19.38■□□□□ 0.69
HOMER3-212ENST00000600077 FBLN1P23142 703 aa19.38■□□□□ 0.69
HOMER3-212ENST00000600077 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
HOMER3-212ENST00000600077 GLTPD2A6NH11 291 aa19.36■□□□□ 0.69
HOMER3-212ENST00000600077 RFC4P35249 363 aa19.36■□□□□ 0.69
HOMER3-212ENST00000600077 GYS1P13807 737 aa19.35■□□□□ 0.69
HOMER3-212ENST00000600077 RRS1Q15050 365 aaKnown RBP19.35■□□□□ 0.69
HOMER3-212ENST00000600077 ARHGEF1Q92888 912 aaKnown RBP19.35■□□□□ 0.69
HOMER3-212ENST00000600077 RC3H1Q5TC82 1133 aaKnown RBP19.34■□□□□ 0.69
HOMER3-212ENST00000600077 ASAP1Q9ULH1 1129 aa19.34■□□□□ 0.69
HOMER3-212ENST00000600077 SPG7Q9UQ90 795 aa19.34■□□□□ 0.69
HOMER3-212ENST00000600077 SBF1O95248 1867 aa19.34■□□□□ 0.69
HOMER3-212ENST00000600077 INSRP06213 1382 aa19.33■□□□□ 0.69
HOMER3-212ENST00000600077 CREBZFQ9NS37 354 aa19.33■□□□□ 0.68
HOMER3-212ENST00000600077 FOXN1O15353 648 aa19.32■□□□□ 0.68
HOMER3-212ENST00000600077 LMNB1P20700 586 aa19.31■□□□□ 0.68
HOMER3-212ENST00000600077 CTCFP49711 727 aaPredicted RBP19.31■□□□□ 0.68
HOMER3-212ENST00000600077 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
HOMER3-212ENST00000600077 KIF24Q5T7B8 1368 aa19.31■□□□□ 0.68
HOMER3-212ENST00000600077 RPS6KA4O75676 772 aa19.3■□□□□ 0.68
HOMER3-212ENST00000600077 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
HOMER3-212ENST00000600077 HSP90AB2PQ58FF8 381 aa19.3■□□□□ 0.68
HOMER3-212ENST00000600077 ATG3Q9NT62 314 aa19.3■□□□□ 0.68
HOMER3-212ENST00000600077 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
HOMER3-212ENST00000600077 KDM6AO15550 1401 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-212ENST00000600077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.68
HOMER3-212ENST00000600077 FLT4P35916 1363 aa19.29■□□□□ 0.68
HOMER3-212ENST00000600077 CNTNAP4Q9C0A0 1308 aa19.28■□□□□ 0.68
HOMER3-212ENST00000600077 DPY19L2Q6NUT2 758 aa19.28■□□□□ 0.68
HOMER3-212ENST00000600077 CHRNA5P30532 468 aa19.27■□□□□ 0.68
HOMER3-212ENST00000600077 RASSF7Q02833 373 aa19.26■□□□□ 0.67
HOMER3-212ENST00000600077 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
HOMER3-212ENST00000600077 CARD11Q9BXL7 1154 aa19.26■□□□□ 0.67
HOMER3-212ENST00000600077 KDRP35968 1356 aa19.26■□□□□ 0.67
HOMER3-212ENST00000600077 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
HOMER3-212ENST00000600077 CNTNAP1P78357 1384 aa19.24■□□□□ 0.67
HOMER3-212ENST00000600077 CHADLQ6NUI6 762 aa19.24■□□□□ 0.67
HOMER3-212ENST00000600077 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
HOMER3-212ENST00000600077 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
HOMER3-212ENST00000600077 FYB1O15117 783 aa19.23■□□□□ 0.67
HOMER3-212ENST00000600077 MLLT1Q03111 559 aaPredicted RBP19.23■□□□□ 0.67
HOMER3-212ENST00000600077 POTECB2RU33 542 aa19.22■□□□□ 0.67
HOMER3-212ENST00000600077 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
HOMER3-212ENST00000600077 PHKG2P15735 406 aa19.22■□□□□ 0.67
HOMER3-212ENST00000600077 DDR1Q08345 913 aa19.22■□□□□ 0.67
HOMER3-212ENST00000600077 GGNBP2Q9H3C7 697 aa19.22■□□□□ 0.67
HOMER3-212ENST00000600077 FKBP8Q14318 412 aa19.21■□□□□ 0.67
HOMER3-212ENST00000600077 NCAPD2Q15021 1401 aa19.21■□□□□ 0.67
HOMER3-212ENST00000600077 SLC4A9Q96Q91 983 aa19.21■□□□□ 0.67
HOMER3-212ENST00000600077 LBX1P52954 281 aa19.2■□□□□ 0.66
HOMER3-212ENST00000600077 USP42Q9H9J4 1324 aaKnown RBP19.2■□□□□ 0.66
HOMER3-212ENST00000600077 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
HOMER3-212ENST00000600077 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
HOMER3-212ENST00000600077 TRIM26Q12899 539 aaPredicted RBP19.19■□□□□ 0.66
HOMER3-212ENST00000600077 WBP1LQ9NX94 342 aa19.19■□□□□ 0.66
HOMER3-212ENST00000600077 COL5A3P25940 1745 aaPredicted RBP19.19■□□□□ 0.66
HOMER3-212ENST00000600077 POLRMTO00411 1230 aaKnown RBP19.18■□□□□ 0.66
HOMER3-212ENST00000600077 RGS19P49795 217 aa19.18■□□□□ 0.66
HOMER3-212ENST00000600077 TTLL6Q8N841 843 aa19.18■□□□□ 0.66
HOMER3-212ENST00000600077 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
HOMER3-212ENST00000600077 TM4SF1P30408 202 aa19.17■□□□□ 0.66
HOMER3-212ENST00000600077 SRP68Q9UHB9 627 aaKnown RBP19.17■□□□□ 0.66
HOMER3-212ENST00000600077 HSP90AB1P08238 724 aaKnown RBP19.15■□□□□ 0.66
HOMER3-212ENST00000600077 VEGFBP49765 207 aa19.15■□□□□ 0.66
HOMER3-212ENST00000600077 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
HOMER3-212ENST00000600077 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
HOMER3-212ENST00000600077 CRKLP46109 303 aaKnown RBP19.14■□□□□ 0.65
HOMER3-212ENST00000600077 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
HOMER3-212ENST00000600077 CCDC85CA6NKD9 419 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 TMEM88BA6NKF7 163 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 NFKBIEO00221 500 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 ZPR1O75312 459 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 EYA1Q99502 592 aa19.13■□□□□ 0.65
HOMER3-212ENST00000600077 PASKQ96RG2 1323 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms