RNA–Protein interactions for RNA: ENST00000599981.5

DDX49-210, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-210ENST00000599981 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.15
DDX49-210ENST00000599981 HTRA3P83110 453 aa22.18■■□□□ 1.14
DDX49-210ENST00000599981 JMYQ8N9B5 988 aa22.18■■□□□ 1.14
DDX49-210ENST00000599981 FLAD1Q8NFF5 587 aa22.18■■□□□ 1.14
DDX49-210ENST00000599981 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
DDX49-210ENST00000599981 NCAPD2Q15021 1401 aa22.16■■□□□ 1.14
DDX49-210ENST00000599981 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
DDX49-210ENST00000599981 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
DDX49-210ENST00000599981 MEGF6O75095 1541 aa22.16■■□□□ 1.14
DDX49-210ENST00000599981 MYBBP1AQ9BQG0 1328 aaKnown RBP22.15■■□□□ 1.14
DDX49-210ENST00000599981 IL13P35225 146 aa22.15■■□□□ 1.14
DDX49-210ENST00000599981 TATP17735 454 aaPredicted RBP22.14■■□□□ 1.13
DDX49-210ENST00000599981 NMRK2Q9NPI5 230 aa22.14■■□□□ 1.13
DDX49-210ENST00000599981 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
DDX49-210ENST00000599981 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
DDX49-210ENST00000599981 C16orf71Q8IYS4 520 aaPredicted RBP22.11■■□□□ 1.13
DDX49-210ENST00000599981 C4BP0C0L5 1744 aa22.11■■□□□ 1.13
DDX49-210ENST00000599981 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
DDX49-210ENST00000599981 TOGARAM1Q9Y4F4 1720 aa22.1■■□□□ 1.13
DDX49-210ENST00000599981 HMGB2P26583 209 aaKnown RBP22.09■■□□□ 1.13
DDX49-210ENST00000599981 MRS2Q9HD23 443 aa22.09■■□□□ 1.13
DDX49-210ENST00000599981 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
DDX49-210ENST00000599981 UBR3Q6ZT12 1888 aa22.08■■□□□ 1.13
DDX49-210ENST00000599981 PHF14O94880 888 aa22.07■■□□□ 1.12
DDX49-210ENST00000599981 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
DDX49-210ENST00000599981 AEBP1Q8IUX7 1158 aa22.07■■□□□ 1.12
DDX49-210ENST00000599981 AK7Q96M32 723 aa22.07■■□□□ 1.12
DDX49-210ENST00000599981 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
DDX49-210ENST00000599981 FSTL1Q12841 308 aa22.06■■□□□ 1.12
DDX49-210ENST00000599981 N4BP2Q86UW6 1770 aaPredicted RBP22.05■■□□□ 1.12
DDX49-210ENST00000599981 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
DDX49-210ENST00000599981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.04■■□□□ 1.12
DDX49-210ENST00000599981 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
DDX49-210ENST00000599981 PXDNLA1KZ92 1463 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 KDRP35968 1356 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 SLC34A2O95436 690 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 AMIGO3Q86WK7 504 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 BCS1LQ9Y276 419 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 KIF13BQ9NQT8 1826 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 PCDH11XQ9BZA7 1347 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 PCDH11YQ9BZA8 1340 aa22.03■■□□□ 1.12
DDX49-210ENST00000599981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.02■■□□□ 1.12
DDX49-210ENST00000599981 CYP27B1O15528 508 aa22.02■■□□□ 1.12
DDX49-210ENST00000599981 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.12
DDX49-210ENST00000599981 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
DDX49-210ENST00000599981 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
DDX49-210ENST00000599981 HMOX1P09601 288 aa22.01■■□□□ 1.11
DDX49-210ENST00000599981 SMIM5Q71RC9 77 aa22.01■■□□□ 1.11
DDX49-210ENST00000599981 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
DDX49-210ENST00000599981 HSPA1AP0DMV8 641 aaKnown RBP22■■□□□ 1.11
DDX49-210ENST00000599981 HSPA1BP0DMV9 641 aaKnown RBP22■■□□□ 1.11
DDX49-210ENST00000599981 PLEKHO1Q53GL0 409 aaPredicted RBP21.99■■□□□ 1.11
DDX49-210ENST00000599981 KCPQ6ZWJ8 1503 aa21.98■■□□□ 1.11
DDX49-210ENST00000599981 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
DDX49-210ENST00000599981 AMOTQ4VCS5 1084 aa21.97■■□□□ 1.11
DDX49-210ENST00000599981 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
DDX49-210ENST00000599981 TNRC6CQ9HCJ0 1690 aaKnown RBP21.97■■□□□ 1.11
DDX49-210ENST00000599981 PHKG2P15735 406 aa21.96■■□□□ 1.11
DDX49-210ENST00000599981 SSFA2P28290 1259 aa21.96■■□□□ 1.11
DDX49-210ENST00000599981 NKX1-1Q15270 411 aaPredicted RBP21.96■■□□□ 1.11
DDX49-210ENST00000599981 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
DDX49-210ENST00000599981 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
DDX49-210ENST00000599981 ITGB4P16144 1822 aa21.95■■□□□ 1.1
DDX49-210ENST00000599981 C9orf131Q5VYM1 1079 aa21.95■■□□□ 1.1
DDX49-210ENST00000599981 KDM2BQ8NHM5 1336 aa21.95■■□□□ 1.1
DDX49-210ENST00000599981 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
DDX49-210ENST00000599981 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
DDX49-210ENST00000599981 MMP10P09238 476 aa21.94■■□□□ 1.1
DDX49-210ENST00000599981 U2AF1L5P0DN76 240 aaPredicted RBP21.94■■□□□ 1.1
DDX49-210ENST00000599981 TGFB2P61812 414 aa21.94■■□□□ 1.1
DDX49-210ENST00000599981 U2AF1Q01081 240 aaKnown RBP eCLIP21.94■■□□□ 1.1
DDX49-210ENST00000599981 FCHSD2O94868 740 aa21.93■■□□□ 1.1
DDX49-210ENST00000599981 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
DDX49-210ENST00000599981 C10orf71Q711Q0 1435 aa21.93■■□□□ 1.1
DDX49-210ENST00000599981 PNISRQ8TF01 805 aaKnown RBP21.93■■□□□ 1.1
DDX49-210ENST00000599981 SMARCC1Q92922 1105 aaPredicted RBP21.93■■□□□ 1.1
DDX49-210ENST00000599981 ARFGEF1Q9Y6D6 1849 aa21.92■■□□□ 1.1
DDX49-210ENST00000599981 FAM9BQ8IZU0 186 aa21.92■■□□□ 1.1
DDX49-210ENST00000599981 SMC1BQ8NDV3 1235 aa21.92■■□□□ 1.1
DDX49-210ENST00000599981 RRAGCQ9HB90 399 aa21.92■■□□□ 1.1
DDX49-210ENST00000599981 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
DDX49-210ENST00000599981 YTHDC1Q96MU7 727 aaKnown RBP21.9■■□□□ 1.1
DDX49-210ENST00000599981 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
DDX49-210ENST00000599981 MTHFSDQ2M296 383 aaKnown RBP21.89■■□□□ 1.09
DDX49-210ENST00000599981 C1orf141Q5JVX7 400 aa21.89■■□□□ 1.09
DDX49-210ENST00000599981 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
DDX49-210ENST00000599981 GNPATO15228 680 aa21.88■■□□□ 1.09
DDX49-210ENST00000599981 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
DDX49-210ENST00000599981 DPEP1P16444 411 aa21.88■■□□□ 1.09
DDX49-210ENST00000599981 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDX49-210ENST00000599981 DCAF5Q96JK2 942 aa21.87■■□□□ 1.09
DDX49-210ENST00000599981 PHACTR3Q96KR7 559 aa21.87■■□□□ 1.09
DDX49-210ENST00000599981 RNF181Q9P0P0 153 aa21.87■■□□□ 1.09
DDX49-210ENST00000599981 AKAP4Q5JQC9 854 aa21.86■■□□□ 1.09
DDX49-210ENST00000599981 C4AP0C0L4 1744 aa21.85■■□□□ 1.09
DDX49-210ENST00000599981 LOC102724428A0A0B4J2F2 783 aa21.84■■□□□ 1.09
DDX49-210ENST00000599981 SIK1P57059 783 aa21.84■■□□□ 1.09
DDX49-210ENST00000599981 PIGBQ92521 554 aa21.84■■□□□ 1.09
DDX49-210ENST00000599981 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms