RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
SIN3B-210ENST00000599880 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
SIN3B-210ENST00000599880 ASAP1Q9ULH1 1129 aa14.75□□□□□ -0.05
SIN3B-210ENST00000599880 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
SIN3B-210ENST00000599880 COL23A1Q86Y22 540 aaPredicted RBP14.74□□□□□ -0.05
SIN3B-210ENST00000599880 AK7Q96M32 723 aa14.74□□□□□ -0.05
SIN3B-210ENST00000599880 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
SIN3B-210ENST00000599880 TJP1Q07157 1748 aa14.73□□□□□ -0.05
SIN3B-210ENST00000599880 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
SIN3B-210ENST00000599880 CHD4Q14839 1912 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 HMOX1P09601 288 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 SSFA2P28290 1259 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 ATP6V1AP38606 617 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 CABP4P57796 275 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 LINC00116Q8NCU8 138 aa14.72□□□□□ -0.05
SIN3B-210ENST00000599880 MYH14Q7Z406 1995 aaKnown RBP14.72□□□□□ -0.05
SIN3B-210ENST00000599880 SIPA1L3O60292 1781 aaPredicted RBP14.71□□□□□ -0.05
SIN3B-210ENST00000599880 UBR2Q8IWV8 1755 aa14.71□□□□□ -0.05
SIN3B-210ENST00000599880 ITPK1Q13572 414 aa14.71□□□□□ -0.05
SIN3B-210ENST00000599880 C4AP0C0L4 1744 aa14.71□□□□□ -0.05
SIN3B-210ENST00000599880 UTRNP46939 3433 aa14.71□□□□□ -0.05
SIN3B-210ENST00000599880 MSH5O43196 834 aa14.7□□□□□ -0.06
SIN3B-210ENST00000599880 CFAP53Q96M91 514 aa14.7□□□□□ -0.06
SIN3B-210ENST00000599880 NFATC2IPQ8NCF5 419 aa14.69□□□□□ -0.06
SIN3B-210ENST00000599880 CNTNAP4Q9C0A0 1308 aa14.68□□□□□ -0.06
SIN3B-210ENST00000599880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.68□□□□□ -0.06
SIN3B-210ENST00000599880 CNGB1Q14028 1251 aaPredicted RBP14.68□□□□□ -0.06
SIN3B-210ENST00000599880 MTHFSDQ2M296 383 aaKnown RBP14.68□□□□□ -0.06
SIN3B-210ENST00000599880 AMIGO3Q86WK7 504 aa14.68□□□□□ -0.06
SIN3B-210ENST00000599880 SLC4A9Q96Q91 983 aa14.68□□□□□ -0.06
SIN3B-210ENST00000599880 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
SIN3B-210ENST00000599880 GNPATO15228 680 aa14.67□□□□□ -0.06
SIN3B-210ENST00000599880 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
SIN3B-210ENST00000599880 RC3H1Q5TC82 1133 aaKnown RBP14.67□□□□□ -0.06
SIN3B-210ENST00000599880 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
SIN3B-210ENST00000599880 SLC52A2Q9HAB3 445 aa14.67□□□□□ -0.06
SIN3B-210ENST00000599880 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
SIN3B-210ENST00000599880 ADRA2BP18089 450 aa14.66□□□□□ -0.06
SIN3B-210ENST00000599880 GAS2L2Q8NHY3 880 aa14.66□□□□□ -0.06
SIN3B-210ENST00000599880 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
SIN3B-210ENST00000599880 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
SIN3B-210ENST00000599880 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
SIN3B-210ENST00000599880 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
SIN3B-210ENST00000599880 PHF14O94880 888 aa14.65□□□□□ -0.06
SIN3B-210ENST00000599880 MSL1Q68DK7 614 aa14.65□□□□□ -0.06
SIN3B-210ENST00000599880 RTCBQ9Y3I0 505 aaKnown RBP14.65□□□□□ -0.06
SIN3B-210ENST00000599880 LGR6Q9HBX8 967 aa14.64□□□□□ -0.07
SIN3B-210ENST00000599880 PTCD1O75127 700 aaKnown RBP14.63□□□□□ -0.07
SIN3B-210ENST00000599880 KLHL34Q8N239 644 aa14.63□□□□□ -0.07
SIN3B-210ENST00000599880 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
SIN3B-210ENST00000599880 GNAT3A8MTJ3 354 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 RPS6KA4O75676 772 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 YY1P25490 414 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 TRAPPC3LQ5T215 181 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 CD2APQ9Y5K6 639 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
SIN3B-210ENST00000599880 CEMIPQ8WUJ3 1361 aa14.61□□□□□ -0.07
SIN3B-210ENST00000599880 PRKAR2BP31323 418 aa14.61□□□□□ -0.07
SIN3B-210ENST00000599880 CRKLP46109 303 aaKnown RBP14.61□□□□□ -0.07
SIN3B-210ENST00000599880 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
SIN3B-210ENST00000599880 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
SIN3B-210ENST00000599880 NLGN2Q8NFZ4 835 aa14.61□□□□□ -0.07
SIN3B-210ENST00000599880 FCHSD2O94868 740 aa14.6□□□□□ -0.07
SIN3B-210ENST00000599880 KIAA1551Q9HCM1 1747 aa14.6□□□□□ -0.07
SIN3B-210ENST00000599880 U2AF1L5P0DN76 240 aaPredicted RBP14.59□□□□□ -0.07
SIN3B-210ENST00000599880 U2AF1Q01081 240 aaKnown RBP eCLIP14.59□□□□□ -0.07
SIN3B-210ENST00000599880 TEFQ10587 303 aa14.59□□□□□ -0.07
SIN3B-210ENST00000599880 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
SIN3B-210ENST00000599880 ARHGEF1Q92888 912 aaKnown RBP14.59□□□□□ -0.07
SIN3B-210ENST00000599880 RFC4P35249 363 aa14.58□□□□□ -0.08
SIN3B-210ENST00000599880 SLC39A6Q13433 755 aa14.58□□□□□ -0.08
SIN3B-210ENST00000599880 GPR162Q16538 588 aa14.58□□□□□ -0.08
SIN3B-210ENST00000599880 IL17REQ8NFR9 667 aa14.58□□□□□ -0.08
SIN3B-210ENST00000599880 PHACTR3Q96KR7 559 aa14.58□□□□□ -0.08
SIN3B-210ENST00000599880 BRCA1P38398 1863 aaKnown RBP14.57□□□□□ -0.08
SIN3B-210ENST00000599880 GYS1P13807 737 aa14.57□□□□□ -0.08
SIN3B-210ENST00000599880 DNAJC10Q8IXB1 793 aa14.57□□□□□ -0.08
SIN3B-210ENST00000599880 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
SIN3B-210ENST00000599880 CCDC87Q9NVE4 849 aa14.57□□□□□ -0.08
SIN3B-210ENST00000599880 MMP10P09238 476 aa14.56□□□□□ -0.08
SIN3B-210ENST00000599880 CYP19A1P11511 503 aaPredicted RBP14.56□□□□□ -0.08
SIN3B-210ENST00000599880 INTS5Q6P9B9 1019 aaKnown RBP14.56□□□□□ -0.08
SIN3B-210ENST00000599880 N4BP2Q86UW6 1770 aaPredicted RBP14.55□□□□□ -0.08
SIN3B-210ENST00000599880 RALBP1Q15311 655 aa14.55□□□□□ -0.08
SIN3B-210ENST00000599880 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
SIN3B-210ENST00000599880 SOS1Q07889 1333 aaPredicted RBP14.55□□□□□ -0.08
SIN3B-210ENST00000599880 USP42Q9H9J4 1324 aaKnown RBP14.55□□□□□ -0.08
SIN3B-210ENST00000599880 HEG1Q9ULI3 1381 aa14.55□□□□□ -0.08
SIN3B-210ENST00000599880 C10orf71Q711Q0 1435 aa14.55□□□□□ -0.08
SIN3B-210ENST00000599880 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
SIN3B-210ENST00000599880 HTATSF1O43719 755 aaKnown RBP14.54□□□□□ -0.08
SIN3B-210ENST00000599880 GRIN3BO60391 1043 aa14.54□□□□□ -0.08
SIN3B-210ENST00000599880 COL15A1P39059 1388 aa14.54□□□□□ -0.08
SIN3B-210ENST00000599880 NRXN2Q9P2S2 1712 aa14.54□□□□□ -0.08
SIN3B-210ENST00000599880 KDM3BQ7LBC6 1761 aa14.54□□□□□ -0.08
SIN3B-210ENST00000599880 AFDNP55196 1824 aaKnown RBP14.54□□□□□ -0.08
SIN3B-210ENST00000599880 LAMB4A4D0S4 1761 aa14.53□□□□□ -0.08
SIN3B-210ENST00000599880 RTF1Q92541 710 aaKnown RBP14.53□□□□□ -0.08
SIN3B-210ENST00000599880 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
SIN3B-210ENST00000599880 PXDNLA1KZ92 1463 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms