RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
LSP1P1-201ENST00000599825 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
LSP1P1-201ENST00000599825 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
LSP1P1-201ENST00000599825 CABP4P57796 275 aa13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 CC2D1BQ5T0F9 858 aaKnown RBP13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
LSP1P1-201ENST00000599825 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
LSP1P1-201ENST00000599825 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
LSP1P1-201ENST00000599825 ZNF526Q8TF50 670 aaPredicted RBP13.86□□□□□ -0.19
LSP1P1-201ENST00000599825 HMOX1P09601 288 aa13.85□□□□□ -0.19
LSP1P1-201ENST00000599825 SSFA2P28290 1259 aa13.85□□□□□ -0.19
LSP1P1-201ENST00000599825 MTHFSP49914 203 aa13.85□□□□□ -0.19
LSP1P1-201ENST00000599825 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
LSP1P1-201ENST00000599825 DCAF5Q96JK2 942 aa13.84□□□□□ -0.19
LSP1P1-201ENST00000599825 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
LSP1P1-201ENST00000599825 GOLGB1Q14789 3259 aaKnown RBP13.84□□□□□ -0.19
LSP1P1-201ENST00000599825 KDRP35968 1356 aa13.83□□□□□ -0.19
LSP1P1-201ENST00000599825 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
LSP1P1-201ENST00000599825 GIGYF1O75420 1035 aaPredicted RBP13.83□□□□□ -0.2
LSP1P1-201ENST00000599825 MMP10P09238 476 aa13.83□□□□□ -0.2
LSP1P1-201ENST00000599825 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
LSP1P1-201ENST00000599825 CD2APQ9Y5K6 639 aa13.83□□□□□ -0.2
LSP1P1-201ENST00000599825 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
LSP1P1-201ENST00000599825 ERVV-2B6SEH9 535 aa13.82□□□□□ -0.2
LSP1P1-201ENST00000599825 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
LSP1P1-201ENST00000599825 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
LSP1P1-201ENST00000599825 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
LSP1P1-201ENST00000599825 IL13P35225 146 aa13.81□□□□□ -0.2
LSP1P1-201ENST00000599825 C1QTNF8P60827 252 aa13.81□□□□□ -0.2
LSP1P1-201ENST00000599825 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
LSP1P1-201ENST00000599825 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
LSP1P1-201ENST00000599825 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
LSP1P1-201ENST00000599825 RFC4P35249 363 aa13.8□□□□□ -0.2
LSP1P1-201ENST00000599825 COL5A3P25940 1745 aaPredicted RBP13.8□□□□□ -0.2
LSP1P1-201ENST00000599825 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
LSP1P1-201ENST00000599825 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
LSP1P1-201ENST00000599825 C4AP0C0L4 1744 aa13.78□□□□□ -0.2
LSP1P1-201ENST00000599825 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
LSP1P1-201ENST00000599825 TJP1Q07157 1748 aa13.78□□□□□ -0.2
LSP1P1-201ENST00000599825 N4BP2Q86UW6 1770 aaPredicted RBP13.78□□□□□ -0.2
LSP1P1-201ENST00000599825 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 CRKLP46109 303 aaKnown RBP13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 SLC39A6Q13433 755 aa13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
LSP1P1-201ENST00000599825 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 RPS6KA4O75676 772 aa13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 DNAJC10Q8IXB1 793 aa13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 PARP3Q9Y6F1 533 aa13.76□□□□□ -0.21
LSP1P1-201ENST00000599825 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
LSP1P1-201ENST00000599825 GYS1P13807 737 aa13.75□□□□□ -0.21
LSP1P1-201ENST00000599825 AKAP4Q5JQC9 854 aa13.75□□□□□ -0.21
LSP1P1-201ENST00000599825 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
LSP1P1-201ENST00000599825 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
LSP1P1-201ENST00000599825 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
LSP1P1-201ENST00000599825 MTHFSDQ2M296 383 aaKnown RBP13.74□□□□□ -0.21
LSP1P1-201ENST00000599825 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
LSP1P1-201ENST00000599825 SLC52A2Q9HAB3 445 aa13.74□□□□□ -0.21
LSP1P1-201ENST00000599825 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 RNMTO43148 476 aaKnown RBP13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 DPEP1P16444 411 aa13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 FKBP8Q14318 412 aa13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 KIAA1551Q9HCM1 1747 aa13.73□□□□□ -0.21
LSP1P1-201ENST00000599825 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
LSP1P1-201ENST00000599825 FCHSD2O94868 740 aa13.72□□□□□ -0.21
LSP1P1-201ENST00000599825 ADRA2BP18089 450 aa13.72□□□□□ -0.21
LSP1P1-201ENST00000599825 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
LSP1P1-201ENST00000599825 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
LSP1P1-201ENST00000599825 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
LSP1P1-201ENST00000599825 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
LSP1P1-201ENST00000599825 DDR1Q08345 913 aa13.71□□□□□ -0.21
LSP1P1-201ENST00000599825 ZPR1O75312 459 aa13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 ADCY9O60503 1353 aa13.7□□□□□ -0.22
LSP1P1-201ENST00000599825 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 MRC1P22897 1456 aa13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 CHRNA5P30532 468 aa13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
LSP1P1-201ENST00000599825 TGFB2P61812 414 aa13.68□□□□□ -0.22
LSP1P1-201ENST00000599825 TEFQ10587 303 aa13.68□□□□□ -0.22
LSP1P1-201ENST00000599825 BICDL1Q6ZP65 573 aa13.68□□□□□ -0.22
LSP1P1-201ENST00000599825 COL15A1P39059 1388 aa13.68□□□□□ -0.22
LSP1P1-201ENST00000599825 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
LSP1P1-201ENST00000599825 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
LSP1P1-201ENST00000599825 PRKAR2BP31323 418 aa13.66□□□□□ -0.22
LSP1P1-201ENST00000599825 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
LSP1P1-201ENST00000599825 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms