RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-213ENST00000599464 ITGB4P16144 1822 aa12.68□□□□□ -0.38
PRKD2-213ENST00000599464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.68□□□□□ -0.38
PRKD2-213ENST00000599464 GNPATO15228 680 aa12.68□□□□□ -0.38
PRKD2-213ENST00000599464 PER1O15534 1290 aaPredicted RBP12.68□□□□□ -0.38
PRKD2-213ENST00000599464 HMOX1P09601 288 aa12.68□□□□□ -0.38
PRKD2-213ENST00000599464 GPR162Q16538 588 aa12.68□□□□□ -0.38
PRKD2-213ENST00000599464 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
PRKD2-213ENST00000599464 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
PRKD2-213ENST00000599464 SSFA2P28290 1259 aa12.67□□□□□ -0.38
PRKD2-213ENST00000599464 CFAP53Q96M91 514 aa12.67□□□□□ -0.38
PRKD2-213ENST00000599464 KDRP35968 1356 aa12.67□□□□□ -0.38
PRKD2-213ENST00000599464 NPC1L1Q9UHC9 1359 aa12.67□□□□□ -0.38
PRKD2-213ENST00000599464 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
PRKD2-213ENST00000599464 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
PRKD2-213ENST00000599464 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
PRKD2-213ENST00000599464 PTCD1O75127 700 aaKnown RBP12.65□□□□□ -0.38
PRKD2-213ENST00000599464 ITPK1Q13572 414 aa12.65□□□□□ -0.38
PRKD2-213ENST00000599464 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
PRKD2-213ENST00000599464 RTCBQ9Y3I0 505 aaKnown RBP12.65□□□□□ -0.38
PRKD2-213ENST00000599464 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
PRKD2-213ENST00000599464 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
PRKD2-213ENST00000599464 SMIM5Q71RC9 77 aa12.63□□□□□ -0.39
PRKD2-213ENST00000599464 NLGN2Q8NFZ4 835 aa12.63□□□□□ -0.39
PRKD2-213ENST00000599464 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
PRKD2-213ENST00000599464 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
PRKD2-213ENST00000599464 RFC4P35249 363 aa12.61□□□□□ -0.39
PRKD2-213ENST00000599464 MTHFSDQ2M296 383 aaKnown RBP12.61□□□□□ -0.39
PRKD2-213ENST00000599464 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
PRKD2-213ENST00000599464 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
PRKD2-213ENST00000599464 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
PRKD2-213ENST00000599464 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
PRKD2-213ENST00000599464 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
PRKD2-213ENST00000599464 ADRA2BP18089 450 aa12.6□□□□□ -0.39
PRKD2-213ENST00000599464 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
PRKD2-213ENST00000599464 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
PRKD2-213ENST00000599464 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 GRIN3BO60391 1043 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 TEFQ10587 303 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
PRKD2-213ENST00000599464 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
PRKD2-213ENST00000599464 MMP10P09238 476 aa12.58□□□□□ -0.4
PRKD2-213ENST00000599464 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
PRKD2-213ENST00000599464 UBR3Q6ZT12 1888 aa12.58□□□□□ -0.4
PRKD2-213ENST00000599464 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
PRKD2-213ENST00000599464 COL3A1P02461 1466 aaPredicted RBP12.58□□□□□ -0.4
PRKD2-213ENST00000599464 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
PRKD2-213ENST00000599464 NEFMP07197 916 aa12.57□□□□□ -0.4
PRKD2-213ENST00000599464 U2AF1L5P0DN76 240 aaPredicted RBP12.57□□□□□ -0.4
PRKD2-213ENST00000599464 PPP2R1AP30153 589 aa12.57□□□□□ -0.4
PRKD2-213ENST00000599464 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
PRKD2-213ENST00000599464 U2AF1Q01081 240 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRKD2-213ENST00000599464 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
PRKD2-213ENST00000599464 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
PRKD2-213ENST00000599464 CCDC87Q9NVE4 849 aa12.56□□□□□ -0.4
PRKD2-213ENST00000599464 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
PRKD2-213ENST00000599464 MRC1P22897 1456 aa12.55□□□□□ -0.4
PRKD2-213ENST00000599464 DNAJC10Q8IXB1 793 aa12.55□□□□□ -0.4
PRKD2-213ENST00000599464 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
PRKD2-213ENST00000599464 WWC3Q9ULE0 1092 aa12.55□□□□□ -0.4
PRKD2-213ENST00000599464 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
PRKD2-213ENST00000599464 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
PRKD2-213ENST00000599464 ZPR1O75312 459 aa12.54□□□□□ -0.4
PRKD2-213ENST00000599464 GYS1P13807 737 aa12.54□□□□□ -0.4
PRKD2-213ENST00000599464 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
PRKD2-213ENST00000599464 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
PRKD2-213ENST00000599464 ZNF784Q8NCA9 323 aaPredicted RBP12.54□□□□□ -0.4
PRKD2-213ENST00000599464 VSIG10Q8N0Z9 540 aa12.53□□□□□ -0.4
PRKD2-213ENST00000599464 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
PRKD2-213ENST00000599464 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
PRKD2-213ENST00000599464 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
PRKD2-213ENST00000599464 TJP1Q07157 1748 aa12.52□□□□□ -0.41
PRKD2-213ENST00000599464 STARD3NLO95772 234 aa12.52□□□□□ -0.41
PRKD2-213ENST00000599464 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
PRKD2-213ENST00000599464 FCHSD2O94868 740 aa12.51□□□□□ -0.41
PRKD2-213ENST00000599464 CYP19A1P11511 503 aaPredicted RBP12.51□□□□□ -0.41
PRKD2-213ENST00000599464 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
PRKD2-213ENST00000599464 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
PRKD2-213ENST00000599464 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
PRKD2-213ENST00000599464 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
PRKD2-213ENST00000599464 COL15A1P39059 1388 aa12.51□□□□□ -0.41
PRKD2-213ENST00000599464 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
PRKD2-213ENST00000599464 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 TGFB2P61812 414 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 USPL1Q5W0Q7 1092 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
PRKD2-213ENST00000599464 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
PRKD2-213ENST00000599464 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
PRKD2-213ENST00000599464 HEG1Q9ULI3 1381 aa12.49□□□□□ -0.41
PRKD2-213ENST00000599464 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
PRKD2-213ENST00000599464 FKBP8Q14318 412 aa12.49□□□□□ -0.41
PRKD2-213ENST00000599464 BCS1LQ9Y276 419 aa12.49□□□□□ -0.41
PRKD2-213ENST00000599464 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
PRKD2-213ENST00000599464 PXDNLA1KZ92 1463 aa12.48□□□□□ -0.41
PRKD2-213ENST00000599464 C10orf71Q711Q0 1435 aa12.48□□□□□ -0.41
PRKD2-213ENST00000599464 MAPK8IP3Q9UPT6 1336 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms