RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 NKX1-1Q15270 411 aaPredicted RBP13.17□□□□□ -0.3
LINC00649-210ENST00000599421 ARFGEF1Q9Y6D6 1849 aa13.17□□□□□ -0.3
LINC00649-210ENST00000599421 GNPATO15228 680 aa13.16□□□□□ -0.3
LINC00649-210ENST00000599421 MMP10P09238 476 aa13.16□□□□□ -0.3
LINC00649-210ENST00000599421 TGFB2P61812 414 aa13.16□□□□□ -0.3
LINC00649-210ENST00000599421 C10orf71Q711Q0 1435 aa13.15□□□□□ -0.3
LINC00649-210ENST00000599421 ITPK1Q13572 414 aa13.15□□□□□ -0.3
LINC00649-210ENST00000599421 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
LINC00649-210ENST00000599421 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
LINC00649-210ENST00000599421 TMF1P82094 1093 aa13.14□□□□□ -0.31
LINC00649-210ENST00000599421 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
LINC00649-210ENST00000599421 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
LINC00649-210ENST00000599421 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
LINC00649-210ENST00000599421 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
LINC00649-210ENST00000599421 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC00649-210ENST00000599421 EMILIN1Q9Y6C2 1016 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 COL5A3P25940 1745 aaPredicted RBP13.12□□□□□ -0.31
LINC00649-210ENST00000599421 SBF1O95248 1867 aa13.12□□□□□ -0.31
LINC00649-210ENST00000599421 KDRP35968 1356 aa13.11□□□□□ -0.31
LINC00649-210ENST00000599421 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
LINC00649-210ENST00000599421 FCHSD2O94868 740 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 DPEP1P16444 411 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 FSTL1Q12841 308 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-210ENST00000599421 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-210ENST00000599421 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
LINC00649-210ENST00000599421 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
LINC00649-210ENST00000599421 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
LINC00649-210ENST00000599421 PHKG2P15735 406 aa13.09□□□□□ -0.31
LINC00649-210ENST00000599421 ADRA2BP18089 450 aa13.09□□□□□ -0.31
LINC00649-210ENST00000599421 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00649-210ENST00000599421 HTRA3P83110 453 aa13.09□□□□□ -0.31
LINC00649-210ENST00000599421 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
LINC00649-210ENST00000599421 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
LINC00649-210ENST00000599421 GYS1P13807 737 aa13.08□□□□□ -0.32
LINC00649-210ENST00000599421 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
LINC00649-210ENST00000599421 KCNA3P22001 575 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
LINC00649-210ENST00000599421 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
LINC00649-210ENST00000599421 EYA1Q99502 592 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
LINC00649-210ENST00000599421 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
LINC00649-210ENST00000599421 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
LINC00649-210ENST00000599421 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
LINC00649-210ENST00000599421 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
LINC00649-210ENST00000599421 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
LINC00649-210ENST00000599421 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
LINC00649-210ENST00000599421 RFC4P35249 363 aa13.05□□□□□ -0.32
LINC00649-210ENST00000599421 CAPN15O75808 1086 aa13.04□□□□□ -0.32
LINC00649-210ENST00000599421 HSPA5P11021 654 aaKnown RBP13.04□□□□□ -0.32
LINC00649-210ENST00000599421 CDCA8Q53HL2 280 aa13.04□□□□□ -0.32
LINC00649-210ENST00000599421 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
LINC00649-210ENST00000599421 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
LINC00649-210ENST00000599421 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
LINC00649-210ENST00000599421 RNF181Q9P0P0 153 aa13.04□□□□□ -0.32
LINC00649-210ENST00000599421 ERVV-2B6SEH9 535 aa13.03□□□□□ -0.32
LINC00649-210ENST00000599421 PRELPP51888 382 aa13.03□□□□□ -0.32
LINC00649-210ENST00000599421 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
LINC00649-210ENST00000599421 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
LINC00649-210ENST00000599421 CCDC88AQ3V6T2 1871 aa13.03□□□□□ -0.32
LINC00649-210ENST00000599421 HSP90AB1P08238 724 aaKnown RBP13.01□□□□□ -0.33
LINC00649-210ENST00000599421 POLKQ9UBT6 870 aa13.01□□□□□ -0.33
LINC00649-210ENST00000599421 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
LINC00649-210ENST00000599421 TJP1Q07157 1748 aa13.01□□□□□ -0.33
LINC00649-210ENST00000599421 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
LINC00649-210ENST00000599421 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
LINC00649-210ENST00000599421 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
LINC00649-210ENST00000599421 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
LINC00649-210ENST00000599421 DDR1Q08345 913 aa13□□□□□ -0.33
LINC00649-210ENST00000599421 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
LINC00649-210ENST00000599421 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
LINC00649-210ENST00000599421 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
LINC00649-210ENST00000599421 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
LINC00649-210ENST00000599421 CHRNA5P30532 468 aa12.99□□□□□ -0.33
LINC00649-210ENST00000599421 EIF4A2Q14240 407 aaKnown RBP12.99□□□□□ -0.33
LINC00649-210ENST00000599421 FKBP8Q14318 412 aa12.99□□□□□ -0.33
LINC00649-210ENST00000599421 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
LINC00649-210ENST00000599421 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
LINC00649-210ENST00000599421 HSPA1AP0DMV8 641 aaKnown RBP12.98□□□□□ -0.33
LINC00649-210ENST00000599421 HSPA1BP0DMV9 641 aaKnown RBP12.98□□□□□ -0.33
LINC00649-210ENST00000599421 CRKLP46109 303 aaKnown RBP12.98□□□□□ -0.33
LINC00649-210ENST00000599421 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
LINC00649-210ENST00000599421 POLRMTO00411 1230 aaKnown RBP12.97□□□□□ -0.33
LINC00649-210ENST00000599421 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
LINC00649-210ENST00000599421 CABP4P57796 275 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms