RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
C19orf48-211ENST00000599004 FCHSD2O94868 740 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 FSTL1Q12841 308 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 TESK2Q96S53 571 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
C19orf48-211ENST00000599004 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 DPEP1P16444 411 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 TNS4Q8IZW8 715 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 CCDC87Q9NVE4 849 aa16.66■□□□□ 0.26
C19orf48-211ENST00000599004 ST20-MTHFSA0A0A6YYL1 179 aa16.65■□□□□ 0.26
C19orf48-211ENST00000599004 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
C19orf48-211ENST00000599004 TMF1P82094 1093 aa16.65■□□□□ 0.26
C19orf48-211ENST00000599004 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
C19orf48-211ENST00000599004 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
C19orf48-211ENST00000599004 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
C19orf48-211ENST00000599004 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
C19orf48-211ENST00000599004 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
C19orf48-211ENST00000599004 C4AP0C0L4 1744 aa16.63■□□□□ 0.25
C19orf48-211ENST00000599004 PRELPP51888 382 aa16.63■□□□□ 0.25
C19orf48-211ENST00000599004 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
C19orf48-211ENST00000599004 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
C19orf48-211ENST00000599004 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
C19orf48-211ENST00000599004 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
C19orf48-211ENST00000599004 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
C19orf48-211ENST00000599004 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
C19orf48-211ENST00000599004 PCNTO95613 3336 aa16.61■□□□□ 0.25
C19orf48-211ENST00000599004 ADRA2BP18089 450 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 RFC4P35249 363 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 IFNL2Q8IZJ0 200 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
C19orf48-211ENST00000599004 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
C19orf48-211ENST00000599004 RNF181Q9P0P0 153 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 PIM2Q9P1W9 311 aa16.6■□□□□ 0.25
C19orf48-211ENST00000599004 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
C19orf48-211ENST00000599004 GYS1P13807 737 aa16.59■□□□□ 0.25
C19orf48-211ENST00000599004 PHKG2P15735 406 aa16.59■□□□□ 0.25
C19orf48-211ENST00000599004 KCNA3P22001 575 aa16.59■□□□□ 0.25
C19orf48-211ENST00000599004 KDRP35968 1356 aa16.59■□□□□ 0.25
C19orf48-211ENST00000599004 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
C19orf48-211ENST00000599004 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
C19orf48-211ENST00000599004 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
C19orf48-211ENST00000599004 RC3H1Q5TC82 1133 aaKnown RBP16.58■□□□□ 0.24
C19orf48-211ENST00000599004 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
C19orf48-211ENST00000599004 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
C19orf48-211ENST00000599004 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
C19orf48-211ENST00000599004 EYA1Q99502 592 aa16.57■□□□□ 0.24
C19orf48-211ENST00000599004 ZNF831Q5JPB2 1677 aa16.56■□□□□ 0.24
C19orf48-211ENST00000599004 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
C19orf48-211ENST00000599004 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
C19orf48-211ENST00000599004 SLC4A9Q96Q91 983 aa16.56■□□□□ 0.24
C19orf48-211ENST00000599004 SBF1O95248 1867 aa16.56■□□□□ 0.24
C19orf48-211ENST00000599004 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
C19orf48-211ENST00000599004 WASHC2AQ641Q2 1341 aa16.54■□□□□ 0.24
C19orf48-211ENST00000599004 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
C19orf48-211ENST00000599004 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
C19orf48-211ENST00000599004 HSPA1AP0DMV8 641 aaKnown RBP16.53■□□□□ 0.24
C19orf48-211ENST00000599004 HSPA1BP0DMV9 641 aaKnown RBP16.53■□□□□ 0.24
C19orf48-211ENST00000599004 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
C19orf48-211ENST00000599004 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
C19orf48-211ENST00000599004 CHRNA5P30532 468 aa16.52■□□□□ 0.24
C19orf48-211ENST00000599004 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
C19orf48-211ENST00000599004 ZC3H4Q9UPT8 1303 aaKnown RBP16.5■□□□□ 0.23
C19orf48-211ENST00000599004 DDR1Q08345 913 aa16.5■□□□□ 0.23
C19orf48-211ENST00000599004 FKBP8Q14318 412 aa16.5■□□□□ 0.23
C19orf48-211ENST00000599004 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
C19orf48-211ENST00000599004 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
C19orf48-211ENST00000599004 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
C19orf48-211ENST00000599004 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
C19orf48-211ENST00000599004 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
C19orf48-211ENST00000599004 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
C19orf48-211ENST00000599004 CABP4P57796 275 aa16.48■□□□□ 0.23
C19orf48-211ENST00000599004 RASSF7Q02833 373 aa16.48■□□□□ 0.23
C19orf48-211ENST00000599004 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
C19orf48-211ENST00000599004 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
C19orf48-211ENST00000599004 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
C19orf48-211ENST00000599004 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.23
C19orf48-211ENST00000599004 LMNB1P20700 586 aa16.46■□□□□ 0.23
C19orf48-211ENST00000599004 EIF4A2Q14240 407 aaKnown RBP16.46■□□□□ 0.23
C19orf48-211ENST00000599004 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
C19orf48-211ENST00000599004 TM4SF1P30408 202 aa16.44■□□□□ 0.22
C19orf48-211ENST00000599004 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
C19orf48-211ENST00000599004 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
C19orf48-211ENST00000599004 ZPR1O75312 459 aa16.43■□□□□ 0.22
C19orf48-211ENST00000599004 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
C19orf48-211ENST00000599004 TJP1Q07157 1748 aa16.42■□□□□ 0.22
C19orf48-211ENST00000599004 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
C19orf48-211ENST00000599004 MTHFSP49914 203 aa16.42■□□□□ 0.22
C19orf48-211ENST00000599004 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
C19orf48-211ENST00000599004 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
C19orf48-211ENST00000599004 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
C19orf48-211ENST00000599004 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
C19orf48-211ENST00000599004 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
C19orf48-211ENST00000599004 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
C19orf48-211ENST00000599004 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms