RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 FNBP4Q8N3X1 1017 aaPredicted RBP30.02■■■□□ 2.4
SYMPK-212ENST00000598896 DDX54Q8TDD1 881 aaKnown RBP30.01■■■□□ 2.39
SYMPK-212ENST00000598896 SLC52A2Q9HAB3 445 aa30.01■■■□□ 2.39
SYMPK-212ENST00000598896 KCNQ3O43525 872 aa30■■■□□ 2.39
SYMPK-212ENST00000598896 EXOC6Q8TAG9 804 aa29.99■■■□□ 2.39
SYMPK-212ENST00000598896 TCERG1O14776 1098 aaKnown RBP29.99■■■□□ 2.39
SYMPK-212ENST00000598896 CANXP27824 592 aaKnown RBP29.99■■■□□ 2.39
SYMPK-212ENST00000598896 THRAP3Q9Y2W1 955 aaKnown RBP29.99■■■□□ 2.39
SYMPK-212ENST00000598896 NKX1-1Q15270 411 aaPredicted RBP29.98■■■□□ 2.39
SYMPK-212ENST00000598896 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.98■■■□□ 2.39
SYMPK-212ENST00000598896 NFATC2IPQ8NCF5 419 aa29.97■■■□□ 2.39
SYMPK-212ENST00000598896 CRBNQ96SW2 442 aa29.97■■■□□ 2.39
SYMPK-212ENST00000598896 TNNQ9UQP3 1299 aa29.97■■■□□ 2.39
SYMPK-212ENST00000598896 CCDC9Q9Y3X0 531 aaKnown RBP29.97■■■□□ 2.39
SYMPK-212ENST00000598896 EIF4A1P60842 406 aaKnown RBP29.96■■■□□ 2.39
SYMPK-212ENST00000598896 TOGARAM1Q9Y4F4 1720 aa29.96■■■□□ 2.39
SYMPK-212ENST00000598896 BRPF1P55201 1214 aaPredicted RBP29.95■■■□□ 2.39
SYMPK-212ENST00000598896 MRPL50Q8N5N7 158 aaKnown RBP29.95■■■□□ 2.39
SYMPK-212ENST00000598896 TNS2Q63HR2 1409 aa29.95■■■□□ 2.39
SYMPK-212ENST00000598896 NOB1Q9ULX3 412 aaKnown RBP29.95■■■□□ 2.38
SYMPK-212ENST00000598896 VPS72Q15906 364 aa29.94■■■□□ 2.38
SYMPK-212ENST00000598896 KIF16BQ96L93 1317 aa29.94■■■□□ 2.38
SYMPK-212ENST00000598896 PDE3AQ14432 1141 aa29.93■■■□□ 2.38
SYMPK-212ENST00000598896 MEX3CQ5U5Q3 659 aaKnown RBP29.93■■■□□ 2.38
SYMPK-212ENST00000598896 USP21Q9UK80 565 aa29.93■■■□□ 2.38
SYMPK-212ENST00000598896 ZKSCAN2Q63HK3 967 aa29.93■■■□□ 2.38
SYMPK-212ENST00000598896 CDCA7Q9BWT1 371 aaPredicted RBP29.93■■■□□ 2.38
SYMPK-212ENST00000598896 BARGINQ6ZT62 677 aa29.92■■■□□ 2.38
SYMPK-212ENST00000598896 PANK1Q8TE04 598 aa29.92■■■□□ 2.38
SYMPK-212ENST00000598896 RLBP1P12271 317 aa29.91■■■□□ 2.38
SYMPK-212ENST00000598896 PPP4R2Q9NY27 417 aa29.91■■■□□ 2.38
SYMPK-212ENST00000598896 EXOC5O00471 708 aa29.91■■■□□ 2.38
SYMPK-212ENST00000598896 TRIM27P14373 513 aa29.91■■■□□ 2.38
SYMPK-212ENST00000598896 CABP4P57796 275 aa29.91■■■□□ 2.38
SYMPK-212ENST00000598896 SLC39A6Q13433 755 aa29.9■■■□□ 2.38
SYMPK-212ENST00000598896 CLUAP1Q96AJ1 413 aa29.89■■■□□ 2.38
SYMPK-212ENST00000598896 HEG1Q9ULI3 1381 aa29.89■■■□□ 2.38
SYMPK-212ENST00000598896 ERVV-2B6SEH9 535 aa29.89■■■□□ 2.37
SYMPK-212ENST00000598896 ZNF790Q6PG37 636 aa29.89■■■□□ 2.37
SYMPK-212ENST00000598896 ATF7IPQ6VMQ6 1270 aa29.89■■■□□ 2.37
SYMPK-212ENST00000598896 SOS1Q07889 1333 aaPredicted RBP29.88■■■□□ 2.37
SYMPK-212ENST00000598896 AFF2P51816 1311 aa29.87■■■□□ 2.37
SYMPK-212ENST00000598896 DDB1Q16531 1140 aa29.86■■■□□ 2.37
SYMPK-212ENST00000598896 FAM98CQ17RN3 349 aaKnown RBP29.85■■■□□ 2.37
SYMPK-212ENST00000598896 COG6Q9Y2V7 657 aa29.85■■■□□ 2.37
SYMPK-212ENST00000598896 IPO8O15397 1037 aaKnown RBP29.85■■■□□ 2.37
SYMPK-212ENST00000598896 PAPPAQ13219 1627 aa29.84■■■□□ 2.37
SYMPK-212ENST00000598896 HOXB7P09629 217 aa29.84■■■□□ 2.37
SYMPK-212ENST00000598896 DZIP1LQ8IYY4 767 aaKnown RBP29.84■■■□□ 2.37
SYMPK-212ENST00000598896 NECTIN2Q92692 538 aa29.84■■■□□ 2.37
SYMPK-212ENST00000598896 GIGYF1O75420 1035 aaPredicted RBP29.82■■■□□ 2.37
SYMPK-212ENST00000598896 C5P01031 1676 aa29.82■■■□□ 2.37
SYMPK-212ENST00000598896 SLC4A2P04920 1241 aa29.82■■■□□ 2.37
SYMPK-212ENST00000598896 GLI3P10071 1580 aa29.82■■■□□ 2.37
SYMPK-212ENST00000598896 ITGB4P16144 1822 aa29.82■■■□□ 2.37
SYMPK-212ENST00000598896 B4GALNT3Q6L9W6 998 aa29.82■■■□□ 2.37
SYMPK-212ENST00000598896 PRAMEF22A3QJZ6 481 aa29.82■■■□□ 2.36
SYMPK-212ENST00000598896 HDGFL1Q5TGJ6 251 aa29.82■■■□□ 2.36
SYMPK-212ENST00000598896 CCDC30Q5VVM6 783 aa29.82■■■□□ 2.36
SYMPK-212ENST00000598896 FTSJ3Q8IY81 847 aaKnown RBP29.82■■■□□ 2.36
SYMPK-212ENST00000598896 ARHGAP45Q92619 1136 aa29.82■■■□□ 2.36
SYMPK-212ENST00000598896 UBR2Q8IWV8 1755 aa29.81■■■□□ 2.36
SYMPK-212ENST00000598896 ZNF496Q96IT1 587 aaPredicted RBP29.8■■■□□ 2.36
SYMPK-212ENST00000598896 DOT1LQ8TEK3 1739 aa29.79■■■□□ 2.36
SYMPK-212ENST00000598896 TTC5Q8N0Z6 440 aa29.79■■■□□ 2.36
SYMPK-212ENST00000598896 THSD7AQ9UPZ6 1657 aa29.79■■■□□ 2.36
SYMPK-212ENST00000598896 EIF2S2P20042 333 aaKnown RBP29.78■■■□□ 2.36
SYMPK-212ENST00000598896 MARCH10Q8NA82 808 aaPredicted RBP29.78■■■□□ 2.36
SYMPK-212ENST00000598896 STK31Q9BXU1 1019 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 RGS12O14924 1447 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 CACNA1FO60840 1977 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 MS4A1P11836 297 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 G2E3Q7L622 706 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 ATRNO75882 1429 aa29.78■■■□□ 2.36
SYMPK-212ENST00000598896 TMOD3Q9NYL9 352 aa29.77■■■□□ 2.36
SYMPK-212ENST00000598896 MVPQ14764 893 aaKnown RBP29.76■■■□□ 2.36
SYMPK-212ENST00000598896 KCPQ6ZWJ8 1503 aa29.76■■■□□ 2.35
SYMPK-212ENST00000598896 TMEM57Q8N5G2 664 aa29.76■■■□□ 2.35
SYMPK-212ENST00000598896 GJD4Q96KN9 370 aaPredicted RBP29.76■■■□□ 2.35
SYMPK-212ENST00000598896 ABCC4O15439 1325 aa29.75■■■□□ 2.35
SYMPK-212ENST00000598896 PIGBQ92521 554 aa29.74■■■□□ 2.35
SYMPK-212ENST00000598896 CCDC136Q96JN2 1154 aa29.74■■■□□ 2.35
SYMPK-212ENST00000598896 FMNL2Q96PY5 1086 aa29.74■■■□□ 2.35
SYMPK-212ENST00000598896 BCL9O00512 1426 aa29.73■■■□□ 2.35
SYMPK-212ENST00000598896 PTPRCP08575 1304 aa29.73■■■□□ 2.35
SYMPK-212ENST00000598896 API5Q9BZZ5 524 aaKnown RBP29.73■■■□□ 2.35
SYMPK-212ENST00000598896 CHPF2Q9P2E5 772 aa29.73■■■□□ 2.35
SYMPK-212ENST00000598896 TRPC5Q9UL62 973 aaPredicted RBP29.72■■■□□ 2.35
SYMPK-212ENST00000598896 ITPRIPQ8IWB1 547 aa29.71■■■□□ 2.35
SYMPK-212ENST00000598896 KAT6BQ8WYB5 2073 aa29.71■■■□□ 2.35
SYMPK-212ENST00000598896 FLIIQ13045 1269 aa29.7■■■□□ 2.35
SYMPK-212ENST00000598896 LAMB4A4D0S4 1761 aa29.7■■■□□ 2.34
SYMPK-212ENST00000598896 A0A0G2JS52 829 aa29.7■■■□□ 2.34
SYMPK-212ENST00000598896 SNRPA1P09661 255 aaKnown RBP29.7■■■□□ 2.34
SYMPK-212ENST00000598896 MYT1Q01538 1121 aa29.7■■■□□ 2.34
SYMPK-212ENST00000598896 ASAP1Q9ULH1 1129 aa29.69■■■□□ 2.34
SYMPK-212ENST00000598896 ANXA1P04083 346 aa29.68■■■□□ 2.34
SYMPK-212ENST00000598896 PRIM1P49642 420 aaKnown RBP29.68■■■□□ 2.34
SYMPK-212ENST00000598896 CHMP4AQ9BY43 222 aa29.68■■■□□ 2.34
SYMPK-212ENST00000598896 PHAXQ9H814 394 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms