RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
SNRPA-204ENST00000598452 SSFA2P28290 1259 aa25.82■■□□□ 1.72
SNRPA-204ENST00000598452 CD2APQ9Y5K6 639 aa25.82■■□□□ 1.72
SNRPA-204ENST00000598452 ERVV-2B6SEH9 535 aa25.81■■□□□ 1.72
SNRPA-204ENST00000598452 DCAF5Q96JK2 942 aa25.81■■□□□ 1.72
SNRPA-204ENST00000598452 SLC4A9Q96Q91 983 aa25.81■■□□□ 1.72
SNRPA-204ENST00000598452 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
SNRPA-204ENST00000598452 GOLGB1Q14789 3259 aaKnown RBP25.8■■□□□ 1.72
SNRPA-204ENST00000598452 HSP90AB1P08238 724 aaKnown RBP25.8■■□□□ 1.72
SNRPA-204ENST00000598452 KIF7Q2M1P5 1343 aa25.8■■□□□ 1.72
SNRPA-204ENST00000598452 KDM6AO15550 1401 aaPredicted RBP25.8■■□□□ 1.72
SNRPA-204ENST00000598452 AMOTQ4VCS5 1084 aa25.79■■□□□ 1.72
SNRPA-204ENST00000598452 AMER1Q5JTC6 1135 aaPredicted RBP25.79■■□□□ 1.72
SNRPA-204ENST00000598452 SULT6B1Q6IMI4 303 aa25.79■■□□□ 1.72
SNRPA-204ENST00000598452 RBM42Q9BTD8 480 aaKnown RBP25.79■■□□□ 1.72
SNRPA-204ENST00000598452 CABP4P57796 275 aa25.78■■□□□ 1.72
SNRPA-204ENST00000598452 KDRP35968 1356 aa25.78■■□□□ 1.72
SNRPA-204ENST00000598452 GRIN3BO60391 1043 aa25.77■■□□□ 1.72
SNRPA-204ENST00000598452 IL13P35225 146 aa25.77■■□□□ 1.72
SNRPA-204ENST00000598452 MTHFSP49914 203 aa25.76■■□□□ 1.71
SNRPA-204ENST00000598452 C1orf141Q5JVX7 400 aa25.74■■□□□ 1.71
SNRPA-204ENST00000598452 WWC3Q9ULE0 1092 aa25.74■■□□□ 1.71
SNRPA-204ENST00000598452 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
SNRPA-204ENST00000598452 TRAPPC3LQ5T215 181 aa25.71■■□□□ 1.71
SNRPA-204ENST00000598452 NFATC2IPQ8NCF5 419 aa25.71■■□□□ 1.71
SNRPA-204ENST00000598452 PTCD1O75127 700 aaKnown RBP25.7■■□□□ 1.7
SNRPA-204ENST00000598452 PER1O15534 1290 aaPredicted RBP25.69■■□□□ 1.7
SNRPA-204ENST00000598452 MMP10P09238 476 aa25.69■■□□□ 1.7
SNRPA-204ENST00000598452 CC2D1BQ5T0F9 858 aaKnown RBP25.69■■□□□ 1.7
SNRPA-204ENST00000598452 C1QTNF8P60827 252 aa25.68■■□□□ 1.7
SNRPA-204ENST00000598452 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
SNRPA-204ENST00000598452 ARHGEF1Q92888 912 aaKnown RBP25.68■■□□□ 1.7
SNRPA-204ENST00000598452 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
SNRPA-204ENST00000598452 HMOX1P09601 288 aa25.67■■□□□ 1.7
SNRPA-204ENST00000598452 RPS6KA4O75676 772 aa25.66■■□□□ 1.7
SNRPA-204ENST00000598452 CNGB1Q14028 1251 aaPredicted RBP25.64■■□□□ 1.7
SNRPA-204ENST00000598452 LGR6Q9HBX8 967 aa25.64■■□□□ 1.7
SNRPA-204ENST00000598452 ZNF831Q5JPB2 1677 aa25.64■■□□□ 1.69
SNRPA-204ENST00000598452 GIGYF1O75420 1035 aaPredicted RBP25.63■■□□□ 1.69
SNRPA-204ENST00000598452 ADRA2BP18089 450 aa25.63■■□□□ 1.69
SNRPA-204ENST00000598452 RFC4P35249 363 aa25.63■■□□□ 1.69
SNRPA-204ENST00000598452 AKAP4Q5JQC9 854 aa25.63■■□□□ 1.69
SNRPA-204ENST00000598452 NLGN1Q8N2Q7 840 aa25.63■■□□□ 1.69
SNRPA-204ENST00000598452 COL5A3P25940 1745 aaPredicted RBP25.63■■□□□ 1.69
SNRPA-204ENST00000598452 GYS1P13807 737 aa25.62■■□□□ 1.69
SNRPA-204ENST00000598452 CRKLP46109 303 aaKnown RBP25.62■■□□□ 1.69
SNRPA-204ENST00000598452 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
SNRPA-204ENST00000598452 DIAPH1O60610 1272 aaKnown RBP25.6■■□□□ 1.69
SNRPA-204ENST00000598452 ATP10DQ9P241 1426 aa25.6■■□□□ 1.69
SNRPA-204ENST00000598452 SLC52A2Q9HAB3 445 aa25.59■■□□□ 1.69
SNRPA-204ENST00000598452 CICQ96RK0 1608 aaPredicted RBP25.59■■□□□ 1.69
SNRPA-204ENST00000598452 RNMTO43148 476 aaKnown RBP25.58■■□□□ 1.69
SNRPA-204ENST00000598452 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
SNRPA-204ENST00000598452 SRP68Q9UHB9 627 aaKnown RBP25.58■■□□□ 1.69
SNRPA-204ENST00000598452 MYH14Q7Z406 1995 aaKnown RBP25.58■■□□□ 1.69
SNRPA-204ENST00000598452 SLC39A6Q13433 755 aa25.57■■□□□ 1.68
SNRPA-204ENST00000598452 PXDNLA1KZ92 1463 aa25.57■■□□□ 1.68
SNRPA-204ENST00000598452 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
SNRPA-204ENST00000598452 A0A0G2JLW4 131 aa25.56■■□□□ 1.68
SNRPA-204ENST00000598452 INTS5Q6P9B9 1019 aaKnown RBP25.56■■□□□ 1.68
SNRPA-204ENST00000598452 DNAJC10Q8IXB1 793 aa25.56■■□□□ 1.68
SNRPA-204ENST00000598452 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
SNRPA-204ENST00000598452 C10orf71Q711Q0 1435 aa25.54■■□□□ 1.68
SNRPA-204ENST00000598452 TGFB2P61812 414 aa25.54■■□□□ 1.68
SNRPA-204ENST00000598452 ZNF526Q8TF50 670 aaPredicted RBP25.54■■□□□ 1.68
SNRPA-204ENST00000598452 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
SNRPA-204ENST00000598452 ADCY9O60503 1353 aa25.54■■□□□ 1.68
SNRPA-204ENST00000598452 TJP1Q07157 1748 aa25.54■■□□□ 1.68
SNRPA-204ENST00000598452 FKBP8Q14318 412 aa25.53■■□□□ 1.68
SNRPA-204ENST00000598452 C4AP0C0L4 1744 aa25.52■■□□□ 1.68
SNRPA-204ENST00000598452 DPEP1P16444 411 aa25.52■■□□□ 1.68
SNRPA-204ENST00000598452 USP42Q9H9J4 1324 aaKnown RBP25.52■■□□□ 1.68
SNRPA-204ENST00000598452 U2SURPO15042 1029 aaKnown RBP25.51■■□□□ 1.67
SNRPA-204ENST00000598452 GPBP1L1Q9HC44 474 aaPredicted RBP25.51■■□□□ 1.67
SNRPA-204ENST00000598452 BCS1LQ9Y276 419 aa25.51■■□□□ 1.67
SNRPA-204ENST00000598452 NPC1L1Q9UHC9 1359 aa25.51■■□□□ 1.67
SNRPA-204ENST00000598452 COL3A1P02461 1466 aaPredicted RBP25.5■■□□□ 1.67
SNRPA-204ENST00000598452 MRC1P22897 1456 aa25.5■■□□□ 1.67
SNRPA-204ENST00000598452 KIAA1551Q9HCM1 1747 aa25.5■■□□□ 1.67
SNRPA-204ENST00000598452 KIF13BQ9NQT8 1826 aa25.49■■□□□ 1.67
SNRPA-204ENST00000598452 CYP19A1P11511 503 aaPredicted RBP25.49■■□□□ 1.67
SNRPA-204ENST00000598452 DDR1Q08345 913 aa25.49■■□□□ 1.67
SNRPA-204ENST00000598452 N4BP2Q86UW6 1770 aaPredicted RBP25.49■■□□□ 1.67
SNRPA-204ENST00000598452 SOS1Q07889 1333 aaPredicted RBP25.47■■□□□ 1.67
SNRPA-204ENST00000598452 KCPQ6ZWJ8 1503 aa25.47■■□□□ 1.67
SNRPA-204ENST00000598452 VIRMAQ69YN4 1812 aaKnown RBP25.47■■□□□ 1.67
SNRPA-204ENST00000598452 KCNA3P22001 575 aa25.46■■□□□ 1.67
SNRPA-204ENST00000598452 FCHSD2O94868 740 aa25.45■■□□□ 1.66
SNRPA-204ENST00000598452 USPL1Q5W0Q7 1092 aa25.45■■□□□ 1.66
SNRPA-204ENST00000598452 ZBTB1Q9Y2K1 713 aa25.45■■□□□ 1.66
SNRPA-204ENST00000598452 ZPR1O75312 459 aa25.44■■□□□ 1.66
SNRPA-204ENST00000598452 ARHGAP27Q6ZUM4 889 aa25.44■■□□□ 1.66
SNRPA-204ENST00000598452 ADAMTS7Q9UKP4 1686 aa25.43■■□□□ 1.66
SNRPA-204ENST00000598452 TM4SF1P30408 202 aa25.43■■□□□ 1.66
SNRPA-204ENST00000598452 IL17REQ8NFR9 667 aa25.43■■□□□ 1.66
SNRPA-204ENST00000598452 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
SNRPA-204ENST00000598452 VSIG10Q8N0Z9 540 aa25.41■■□□□ 1.66
SNRPA-204ENST00000598452 GNAT3A8MTJ3 354 aa25.4■■□□□ 1.66
SNRPA-204ENST00000598452 CHRNA5P30532 468 aa25.4■■□□□ 1.66
SNRPA-204ENST00000598452 TTC5Q8N0Z6 440 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms