RNA–Protein interactions for RNA: ENST00000598271.5

FKRP-216, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-216ENST00000598271 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
FKRP-216ENST00000598271 C1orf141Q5JVX7 400 aa13.02□□□□□ -0.33
FKRP-216ENST00000598271 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
FKRP-216ENST00000598271 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
FKRP-216ENST00000598271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
FKRP-216ENST00000598271 CABP4P57796 275 aa13.01□□□□□ -0.33
FKRP-216ENST00000598271 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
FKRP-216ENST00000598271 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
FKRP-216ENST00000598271 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
FKRP-216ENST00000598271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.33
FKRP-216ENST00000598271 MAP3K5Q99683 1374 aa13.01□□□□□ -0.33
FKRP-216ENST00000598271 HSP90AB1P08238 724 aaKnown RBP13□□□□□ -0.33
FKRP-216ENST00000598271 ITPK1Q13572 414 aa13□□□□□ -0.33
FKRP-216ENST00000598271 ATG3Q9NT62 314 aa13□□□□□ -0.33
FKRP-216ENST00000598271 HMOX1P09601 288 aa12.99□□□□□ -0.33
FKRP-216ENST00000598271 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
FKRP-216ENST00000598271 MTHFSP49914 203 aa12.99□□□□□ -0.33
FKRP-216ENST00000598271 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
FKRP-216ENST00000598271 VIRMAQ69YN4 1812 aaKnown RBP12.99□□□□□ -0.33
FKRP-216ENST00000598271 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
FKRP-216ENST00000598271 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
FKRP-216ENST00000598271 SSFA2P28290 1259 aa12.97□□□□□ -0.33
FKRP-216ENST00000598271 AMOTQ4VCS5 1084 aa12.97□□□□□ -0.33
FKRP-216ENST00000598271 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
FKRP-216ENST00000598271 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.33
FKRP-216ENST00000598271 ANP32CO43423 234 aa12.96□□□□□ -0.33
FKRP-216ENST00000598271 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
FKRP-216ENST00000598271 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
FKRP-216ENST00000598271 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
FKRP-216ENST00000598271 SCN11AQ9UI33 1791 aa12.96□□□□□ -0.34
FKRP-216ENST00000598271 IL13P35225 146 aa12.95□□□□□ -0.34
FKRP-216ENST00000598271 COL5A3P25940 1745 aaPredicted RBP12.95□□□□□ -0.34
FKRP-216ENST00000598271 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
FKRP-216ENST00000598271 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
FKRP-216ENST00000598271 KDRP35968 1356 aa12.94□□□□□ -0.34
FKRP-216ENST00000598271 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
FKRP-216ENST00000598271 MMP10P09238 476 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 RFC4P35249 363 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
FKRP-216ENST00000598271 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
FKRP-216ENST00000598271 CICQ96RK0 1608 aaPredicted RBP12.92□□□□□ -0.34
FKRP-216ENST00000598271 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
FKRP-216ENST00000598271 TJP1Q07157 1748 aa12.92□□□□□ -0.34
FKRP-216ENST00000598271 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
FKRP-216ENST00000598271 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
FKRP-216ENST00000598271 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
FKRP-216ENST00000598271 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
FKRP-216ENST00000598271 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
FKRP-216ENST00000598271 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
FKRP-216ENST00000598271 CRKLP46109 303 aaKnown RBP12.9□□□□□ -0.34
FKRP-216ENST00000598271 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
FKRP-216ENST00000598271 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
FKRP-216ENST00000598271 LGR6Q9HBX8 967 aa12.9□□□□□ -0.34
FKRP-216ENST00000598271 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
FKRP-216ENST00000598271 CNTNAP4Q9C0A0 1308 aa12.89□□□□□ -0.35
FKRP-216ENST00000598271 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
FKRP-216ENST00000598271 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
FKRP-216ENST00000598271 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
FKRP-216ENST00000598271 UTRNP46939 3433 aa12.88□□□□□ -0.35
FKRP-216ENST00000598271 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
FKRP-216ENST00000598271 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
FKRP-216ENST00000598271 DNAJC10Q8IXB1 793 aa12.88□□□□□ -0.35
FKRP-216ENST00000598271 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
FKRP-216ENST00000598271 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
FKRP-216ENST00000598271 PER1O15534 1290 aaPredicted RBP12.87□□□□□ -0.35
FKRP-216ENST00000598271 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
FKRP-216ENST00000598271 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
FKRP-216ENST00000598271 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
FKRP-216ENST00000598271 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
FKRP-216ENST00000598271 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
FKRP-216ENST00000598271 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
FKRP-216ENST00000598271 GYS1P13807 737 aa12.86□□□□□ -0.35
FKRP-216ENST00000598271 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
FKRP-216ENST00000598271 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
FKRP-216ENST00000598271 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
FKRP-216ENST00000598271 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
FKRP-216ENST00000598271 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
FKRP-216ENST00000598271 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
FKRP-216ENST00000598271 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
FKRP-216ENST00000598271 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 ZPR1O75312 459 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 FCHSD2O94868 740 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 TEFQ10587 303 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 FKBP8Q14318 412 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 KIAA1551Q9HCM1 1747 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 MRC1P22897 1456 aa12.84□□□□□ -0.35
FKRP-216ENST00000598271 C10orf71Q711Q0 1435 aa12.83□□□□□ -0.36
FKRP-216ENST00000598271 DPEP1P16444 411 aa12.83□□□□□ -0.36
FKRP-216ENST00000598271 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
FKRP-216ENST00000598271 USPL1Q5W0Q7 1092 aa12.83□□□□□ -0.36
FKRP-216ENST00000598271 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
FKRP-216ENST00000598271 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
FKRP-216ENST00000598271 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
FKRP-216ENST00000598271 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
FKRP-216ENST00000598271 KCNA4P22459 653 aa12.82□□□□□ -0.36
FKRP-216ENST00000598271 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms