RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 C4BP0C0L5 1744 aa31.1■■■□□ 2.57
SSBP4-205ENST00000598159 LINC00116Q8NCU8 138 aa31.08■■■□□ 2.57
SSBP4-205ENST00000598159 KDM6AO15550 1401 aaPredicted RBP31.07■■■□□ 2.57
SSBP4-205ENST00000598159 HMOX1P09601 288 aa31.07■■■□□ 2.56
SSBP4-205ENST00000598159 AKAP4Q5JQC9 854 aa31.07■■■□□ 2.56
SSBP4-205ENST00000598159 ITPK1Q13572 414 aa31.06■■■□□ 2.56
SSBP4-205ENST00000598159 RBM42Q9BTD8 480 aaKnown RBP31.05■■■□□ 2.56
SSBP4-205ENST00000598159 SSFA2P28290 1259 aa31.04■■■□□ 2.56
SSBP4-205ENST00000598159 NFATC2IPQ8NCF5 419 aa31.04■■■□□ 2.56
SSBP4-205ENST00000598159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.02■■■□□ 2.56
SSBP4-205ENST00000598159 YY1P25490 414 aa31.02■■■□□ 2.56
SSBP4-205ENST00000598159 UBR3Q6ZT12 1888 aa31.01■■■□□ 2.56
SSBP4-205ENST00000598159 PHF14O94880 888 aa31.01■■■□□ 2.55
SSBP4-205ENST00000598159 MSL1Q68DK7 614 aa31.01■■■□□ 2.55
SSBP4-205ENST00000598159 AMIGO3Q86WK7 504 aa31.01■■■□□ 2.55
SSBP4-205ENST00000598159 KLHL34Q8N239 644 aa31.01■■■□□ 2.55
SSBP4-205ENST00000598159 SLC4A9Q96Q91 983 aa31■■■□□ 2.55
SSBP4-205ENST00000598159 GNPATO15228 680 aa30.99■■■□□ 2.55
SSBP4-205ENST00000598159 ZNF831Q5JPB2 1677 aa30.99■■■□□ 2.55
SSBP4-205ENST00000598159 MTHFSDQ2M296 383 aaKnown RBP30.98■■■□□ 2.55
SSBP4-205ENST00000598159 RC3H1Q5TC82 1133 aaKnown RBP30.98■■■□□ 2.55
SSBP4-205ENST00000598159 U2SURPO15042 1029 aaKnown RBP30.97■■■□□ 2.55
SSBP4-205ENST00000598159 SMIM5Q71RC9 77 aa30.97■■■□□ 2.55
SSBP4-205ENST00000598159 CFAP53Q96M91 514 aa30.97■■■□□ 2.55
SSBP4-205ENST00000598159 SCN11AQ9UI33 1791 aa30.97■■■□□ 2.55
SSBP4-205ENST00000598159 LGR6Q9HBX8 967 aa30.96■■■□□ 2.55
SSBP4-205ENST00000598159 RNMTO43148 476 aaKnown RBP30.95■■■□□ 2.55
SSBP4-205ENST00000598159 SLC52A2Q9HAB3 445 aa30.95■■■□□ 2.55
SSBP4-205ENST00000598159 RTCBQ9Y3I0 505 aaKnown RBP30.95■■■□□ 2.55
SSBP4-205ENST00000598159 COL3A1P02461 1466 aaPredicted RBP30.95■■■□□ 2.54
SSBP4-205ENST00000598159 PTCD1O75127 700 aaKnown RBP30.94■■■□□ 2.54
SSBP4-205ENST00000598159 TRAPPC3LQ5T215 181 aa30.93■■■□□ 2.54
SSBP4-205ENST00000598159 GPR162Q16538 588 aa30.92■■■□□ 2.54
SSBP4-205ENST00000598159 CD2APQ9Y5K6 639 aa30.91■■■□□ 2.54
SSBP4-205ENST00000598159 CNTNAP4Q9C0A0 1308 aa30.91■■■□□ 2.54
SSBP4-205ENST00000598159 RPS6KA4O75676 772 aa30.9■■■□□ 2.54
SSBP4-205ENST00000598159 PPP2R1AP30153 589 aa30.9■■■□□ 2.54
SSBP4-205ENST00000598159 NLGN2Q8NFZ4 835 aa30.9■■■□□ 2.54
SSBP4-205ENST00000598159 NUDCQ9Y266 331 aa30.9■■■□□ 2.54
SSBP4-205ENST00000598159 ADRA2BP18089 450 aa30.89■■■□□ 2.54
SSBP4-205ENST00000598159 GAS2L2Q8NHY3 880 aa30.88■■■□□ 2.53
SSBP4-205ENST00000598159 ARHGEF1Q92888 912 aaKnown RBP30.86■■■□□ 2.53
SSBP4-205ENST00000598159 COL5A3P25940 1745 aaPredicted RBP30.86■■■□□ 2.53
SSBP4-205ENST00000598159 VIRMAQ69YN4 1812 aaKnown RBP30.85■■■□□ 2.53
SSBP4-205ENST00000598159 NLGN1Q8N2Q7 840 aa30.84■■■□□ 2.53
SSBP4-205ENST00000598159 GNAT3A8MTJ3 354 aa30.83■■■□□ 2.53
SSBP4-205ENST00000598159 RFC4P35249 363 aa30.83■■■□□ 2.53
SSBP4-205ENST00000598159 CRKLP46109 303 aaKnown RBP30.83■■■□□ 2.53
SSBP4-205ENST00000598159 PELP1Q8IZL8 1130 aaKnown RBP30.83■■■□□ 2.53
SSBP4-205ENST00000598159 MYH14Q7Z406 1995 aaKnown RBP30.83■■■□□ 2.53
SSBP4-205ENST00000598159 CHD4Q14839 1912 aa30.83■■■□□ 2.53
SSBP4-205ENST00000598159 MRC1P22897 1456 aa30.82■■■□□ 2.53
SSBP4-205ENST00000598159 SLC39A6Q13433 755 aa30.82■■■□□ 2.52
SSBP4-205ENST00000598159 ADAMTS7Q9UKP4 1686 aa30.81■■■□□ 2.52
SSBP4-205ENST00000598159 RSPH6AQ9H0K4 717 aa30.8■■■□□ 2.52
SSBP4-205ENST00000598159 U2AF1L5P0DN76 240 aaPredicted RBP30.79■■■□□ 2.52
SSBP4-205ENST00000598159 PRKAR2BP31323 418 aa30.79■■■□□ 2.52
SSBP4-205ENST00000598159 U2AF1Q01081 240 aaKnown RBP eCLIP30.79■■■□□ 2.52
SSBP4-205ENST00000598159 IL17REQ8NFR9 667 aa30.79■■■□□ 2.52
SSBP4-205ENST00000598159 GRIN3BO60391 1043 aa30.78■■■□□ 2.52
SSBP4-205ENST00000598159 FCHSD2O94868 740 aa30.78■■■□□ 2.52
SSBP4-205ENST00000598159 PHACTR3Q96KR7 559 aa30.78■■■□□ 2.52
SSBP4-205ENST00000598159 MMP10P09238 476 aa30.77■■■□□ 2.52
SSBP4-205ENST00000598159 TEFQ10587 303 aa30.77■■■□□ 2.52
SSBP4-205ENST00000598159 INTS5Q6P9B9 1019 aaKnown RBP30.77■■■□□ 2.52
SSBP4-205ENST00000598159 DNAJC10Q8IXB1 793 aa30.77■■■□□ 2.52
SSBP4-205ENST00000598159 VSIG10Q8N0Z9 540 aa30.77■■■□□ 2.52
SSBP4-205ENST00000598159 CICQ96RK0 1608 aaPredicted RBP30.76■■■□□ 2.52
SSBP4-205ENST00000598159 GYS1P13807 737 aa30.76■■■□□ 2.51
SSBP4-205ENST00000598159 TJP1Q07157 1748 aa30.75■■■□□ 2.51
SSBP4-205ENST00000598159 TTC5Q8N0Z6 440 aa30.74■■■□□ 2.51
SSBP4-205ENST00000598159 CCDC87Q9NVE4 849 aa30.74■■■□□ 2.51
SSBP4-205ENST00000598159 CYP19A1P11511 503 aaPredicted RBP30.73■■■□□ 2.51
SSBP4-205ENST00000598159 YBX3P16989 372 aaKnown RBP eCLIP30.73■■■□□ 2.51
SSBP4-205ENST00000598159 UTRNP46939 3433 aa30.71■■■□□ 2.51
SSBP4-205ENST00000598159 KCPQ6ZWJ8 1503 aa30.7■■■□□ 2.51
SSBP4-205ENST00000598159 ZNF790Q6PG37 636 aa30.69■■■□□ 2.5
SSBP4-205ENST00000598159 PARP3Q9Y6F1 533 aa30.69■■■□□ 2.5
SSBP4-205ENST00000598159 CEMIPQ8WUJ3 1361 aa30.68■■■□□ 2.5
SSBP4-205ENST00000598159 ZNF784Q8NCA9 323 aaPredicted RBP30.68■■■□□ 2.5
SSBP4-205ENST00000598159 USP42Q9H9J4 1324 aaKnown RBP30.68■■■□□ 2.5
SSBP4-205ENST00000598159 RTF1Q92541 710 aaKnown RBP30.67■■■□□ 2.5
SSBP4-205ENST00000598159 TEX13AQ9BXU3 409 aaPredicted RBP30.67■■■□□ 2.5
SSBP4-205ENST00000598159 SRP68Q9UHB9 627 aaKnown RBP30.67■■■□□ 2.5
SSBP4-205ENST00000598159 ZPR1O75312 459 aa30.66■■■□□ 2.5
SSBP4-205ENST00000598159 STARD3NLO95772 234 aa30.66■■■□□ 2.5
SSBP4-205ENST00000598159 TGFB2P61812 414 aa30.66■■■□□ 2.5
SSBP4-205ENST00000598159 C4AP0C0L4 1744 aa30.66■■■□□ 2.5
SSBP4-205ENST00000598159 SOS1Q07889 1333 aaPredicted RBP30.66■■■□□ 2.5
SSBP4-205ENST00000598159 UBR2Q8IWV8 1755 aa30.65■■■□□ 2.5
SSBP4-205ENST00000598159 ZNF496Q96IT1 587 aaPredicted RBP30.65■■■□□ 2.5
SSBP4-205ENST00000598159 HTATSF1O43719 755 aaKnown RBP30.64■■■□□ 2.5
SSBP4-205ENST00000598159 BTBD11A6QL63 1104 aa30.63■■■□□ 2.49
SSBP4-205ENST00000598159 NEFMP07197 916 aa30.63■■■□□ 2.49
SSBP4-205ENST00000598159 FKBP8Q14318 412 aa30.63■■■□□ 2.49
SSBP4-205ENST00000598159 ZBTB1Q9Y2K1 713 aa30.63■■■□□ 2.49
SSBP4-205ENST00000598159 SIPA1L3O60292 1781 aaPredicted RBP30.63■■■□□ 2.49
SSBP4-205ENST00000598159 RALBP1Q15311 655 aa30.62■■■□□ 2.49
SSBP4-205ENST00000598159 FMNL2Q96PY5 1086 aa30.62■■■□□ 2.49
SSBP4-205ENST00000598159 HEG1Q9ULI3 1381 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms