RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 ARFGEF1Q9Y6D6 1849 aa15.11■□□□□ 0.01
SMG9-206ENST00000597598 GNPATO15228 680 aa15.11■□□□□ 0.01
SMG9-206ENST00000597598 TATP17735 454 aaPredicted RBP15.11■□□□□ 0.01
SMG9-206ENST00000597598 FBLN1P23142 703 aa15.11■□□□□ 0.01
SMG9-206ENST00000597598 L3MBTL2Q969R5 705 aa15.11■□□□□ 0.01
SMG9-206ENST00000597598 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
SMG9-206ENST00000597598 ITGB4P16144 1822 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 ITPK1Q13572 414 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
SMG9-206ENST00000597598 USHBP1Q8N6Y0 703 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 COG3Q96JB2 828 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 RNF181Q9P0P0 153 aa15.1■□□□□ 0.01
SMG9-206ENST00000597598 TMF1P82094 1093 aa15.09■□□□□ 0.01
SMG9-206ENST00000597598 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
SMG9-206ENST00000597598 PIM2Q9P1W9 311 aa15.09■□□□□ 0.01
SMG9-206ENST00000597598 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
SMG9-206ENST00000597598 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
SMG9-206ENST00000597598 C4AP0C0L4 1744 aa15.06■□□□□ 0
SMG9-206ENST00000597598 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
SMG9-206ENST00000597598 ADRA2BP18089 450 aa15.06■□□□□ 0
SMG9-206ENST00000597598 ATP6V1AP38606 617 aa15.06■□□□□ 0
SMG9-206ENST00000597598 DALRD3Q5D0E6 543 aaKnown RBP15.06■□□□□ 0
SMG9-206ENST00000597598 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
SMG9-206ENST00000597598 SBF1O95248 1867 aa15.06■□□□□ 0
SMG9-206ENST00000597598 GYS1P13807 737 aa15.05■□□□□ -0
SMG9-206ENST00000597598 ASAP1Q9ULH1 1129 aa15.05■□□□□ -0
SMG9-206ENST00000597598 RTCBQ9Y3I0 505 aaKnown RBP15.05■□□□□ -0
SMG9-206ENST00000597598 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
SMG9-206ENST00000597598 SMG6Q86US8 1419 aaKnown RBP15.05■□□□□ -0
SMG9-206ENST00000597598 GLTPD2A6NH11 291 aa15.04■□□□□ -0
SMG9-206ENST00000597598 RRS1Q15050 365 aaKnown RBP15.04■□□□□ -0
SMG9-206ENST00000597598 ARHGEF1Q92888 912 aaKnown RBP15.04■□□□□ -0
SMG9-206ENST00000597598 PARP3Q9Y6F1 533 aa15.04■□□□□ -0
SMG9-206ENST00000597598 INSRP06213 1382 aa15.03■□□□□ -0
SMG9-206ENST00000597598 RC3H1Q5TC82 1133 aaKnown RBP15.03■□□□□ -0
SMG9-206ENST00000597598 KDRP35968 1356 aa15.02■□□□□ -0
SMG9-206ENST00000597598 HSP90AB2PQ58FF8 381 aa15.02■□□□□ -0
SMG9-206ENST00000597598 ATG3Q9NT62 314 aa15.02■□□□□ -0
SMG9-206ENST00000597598 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
SMG9-206ENST00000597598 NCAPD2Q15021 1401 aa15.01□□□□□ -0.01
SMG9-206ENST00000597598 FOXN1O15353 648 aa15.01□□□□□ -0.01
SMG9-206ENST00000597598 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
SMG9-206ENST00000597598 RPS6KA4O75676 772 aa15□□□□□ -0.01
SMG9-206ENST00000597598 SLC4A9Q96Q91 983 aa15□□□□□ -0.01
SMG9-206ENST00000597598 CREBZFQ9NS37 354 aa15□□□□□ -0.01
SMG9-206ENST00000597598 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
SMG9-206ENST00000597598 CNTNAP4Q9C0A0 1308 aa14.99□□□□□ -0.01
SMG9-206ENST00000597598 POTECB2RU33 542 aa14.99□□□□□ -0.01
SMG9-206ENST00000597598 LMNB1P20700 586 aa14.99□□□□□ -0.01
SMG9-206ENST00000597598 RFC4P35249 363 aa14.99□□□□□ -0.01
SMG9-206ENST00000597598 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMG9-206ENST00000597598 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
SMG9-206ENST00000597598 FLT4P35916 1363 aa14.98□□□□□ -0.01
SMG9-206ENST00000597598 FYB1O15117 783 aa14.97□□□□□ -0.01
SMG9-206ENST00000597598 CHRNA5P30532 468 aa14.97□□□□□ -0.01
SMG9-206ENST00000597598 CTCFP49711 727 aaPredicted RBP14.97□□□□□ -0.01
SMG9-206ENST00000597598 DDR1Q08345 913 aa14.97□□□□□ -0.01
SMG9-206ENST00000597598 FAM161AQ3B820 660 aa14.97□□□□□ -0.01
SMG9-206ENST00000597598 RASSF7Q02833 373 aa14.96□□□□□ -0.01
SMG9-206ENST00000597598 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.01
SMG9-206ENST00000597598 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
SMG9-206ENST00000597598 PHKG2P15735 406 aa14.95□□□□□ -0.02
SMG9-206ENST00000597598 CNTNAP1P78357 1384 aa14.95□□□□□ -0.02
SMG9-206ENST00000597598 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
SMG9-206ENST00000597598 RGS19P49795 217 aa14.94□□□□□ -0.02
SMG9-206ENST00000597598 FKBP8Q14318 412 aa14.94□□□□□ -0.02
SMG9-206ENST00000597598 IFNL2Q8IZJ0 200 aa14.94□□□□□ -0.02
SMG9-206ENST00000597598 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
SMG9-206ENST00000597598 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
SMG9-206ENST00000597598 TM4SF1P30408 202 aa14.93□□□□□ -0.02
SMG9-206ENST00000597598 ABHD8Q96I13 439 aa14.93□□□□□ -0.02
SMG9-206ENST00000597598 GGNBP2Q9H3C7 697 aa14.93□□□□□ -0.02
SMG9-206ENST00000597598 USP42Q9H9J4 1324 aaKnown RBP14.92□□□□□ -0.02
SMG9-206ENST00000597598 POLRMTO00411 1230 aaKnown RBP14.92□□□□□ -0.02
SMG9-206ENST00000597598 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
SMG9-206ENST00000597598 WBP1LQ9NX94 342 aa14.92□□□□□ -0.02
SMG9-206ENST00000597598 ERVV-2B6SEH9 535 aa14.91□□□□□ -0.02
SMG9-206ENST00000597598 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
SMG9-206ENST00000597598 TESK2Q96S53 571 aa14.91□□□□□ -0.02
SMG9-206ENST00000597598 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
SMG9-206ENST00000597598 SRP68Q9UHB9 627 aaKnown RBP14.91□□□□□ -0.02
SMG9-206ENST00000597598 NFKBIEO00221 500 aa14.9□□□□□ -0.02
SMG9-206ENST00000597598 LBX1P52954 281 aa14.9□□□□□ -0.02
SMG9-206ENST00000597598 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
SMG9-206ENST00000597598 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
SMG9-206ENST00000597598 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
SMG9-206ENST00000597598 VEGFBP49765 207 aa14.89□□□□□ -0.03
SMG9-206ENST00000597598 MLLT1Q03111 559 aaPredicted RBP14.89□□□□□ -0.03
SMG9-206ENST00000597598 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
SMG9-206ENST00000597598 TTLL6Q8N841 843 aa14.88□□□□□ -0.03
SMG9-206ENST00000597598 EYA1Q99502 592 aa14.88□□□□□ -0.03
SMG9-206ENST00000597598 HSPA8P11142 646 aaKnown RBP14.87□□□□□ -0.03
SMG9-206ENST00000597598 CRKLP46109 303 aaKnown RBP14.87□□□□□ -0.03
SMG9-206ENST00000597598 EMILIN1Q9Y6C2 1016 aa14.87□□□□□ -0.03
SMG9-206ENST00000597598 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
SMG9-206ENST00000597598 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
SMG9-206ENST00000597598 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
SMG9-206ENST00000597598 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
SMG9-206ENST00000597598 ADAMTS7Q9UKP4 1686 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms