RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 TGFB2P61812 414 aa22.88■■□□□ 1.25
C19orf54-207ENST00000597507 ATG3Q9NT62 314 aa22.88■■□□□ 1.25
C19orf54-207ENST00000597507 NCAPD2Q15021 1401 aa22.88■■□□□ 1.25
C19orf54-207ENST00000597507 ARHGAP27Q6ZUM4 889 aa22.87■■□□□ 1.25
C19orf54-207ENST00000597507 TMF1P82094 1093 aa22.85■■□□□ 1.25
C19orf54-207ENST00000597507 TRAPPC3LQ5T215 181 aa22.85■■□□□ 1.25
C19orf54-207ENST00000597507 CARD14Q9BXL6 1004 aa22.85■■□□□ 1.25
C19orf54-207ENST00000597507 PPM1GO15355 546 aaPredicted RBP22.84■■□□□ 1.25
C19orf54-207ENST00000597507 DPEP1P16444 411 aa22.84■■□□□ 1.25
C19orf54-207ENST00000597507 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
C19orf54-207ENST00000597507 EYA1Q99502 592 aa22.84■■□□□ 1.25
C19orf54-207ENST00000597507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.84■■□□□ 1.25
C19orf54-207ENST00000597507 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.25
C19orf54-207ENST00000597507 PCNTO95613 3336 aa22.83■■□□□ 1.25
C19orf54-207ENST00000597507 PHKG2P15735 406 aa22.83■■□□□ 1.25
C19orf54-207ENST00000597507 HTRA3P83110 453 aa22.83■■□□□ 1.25
C19orf54-207ENST00000597507 SLC4A9Q96Q91 983 aa22.83■■□□□ 1.25
C19orf54-207ENST00000597507 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
C19orf54-207ENST00000597507 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
C19orf54-207ENST00000597507 IFNL2Q8IZJ0 200 aa22.82■■□□□ 1.24
C19orf54-207ENST00000597507 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
C19orf54-207ENST00000597507 RTCBQ9Y3I0 505 aaKnown RBP22.82■■□□□ 1.24
C19orf54-207ENST00000597507 FCHSD2O94868 740 aa22.81■■□□□ 1.24
C19orf54-207ENST00000597507 KCNA3P22001 575 aa22.81■■□□□ 1.24
C19orf54-207ENST00000597507 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
C19orf54-207ENST00000597507 RBM46Q8TBY0 533 aaKnown RBP22.8■■□□□ 1.24
C19orf54-207ENST00000597507 KDRP35968 1356 aa22.79■■□□□ 1.24
C19orf54-207ENST00000597507 GYS1P13807 737 aa22.79■■□□□ 1.24
C19orf54-207ENST00000597507 C9orf131Q5VYM1 1079 aa22.79■■□□□ 1.24
C19orf54-207ENST00000597507 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
C19orf54-207ENST00000597507 MYH14Q7Z406 1995 aaKnown RBP22.78■■□□□ 1.24
C19orf54-207ENST00000597507 COL13A1Q5TAT6 717 aaPredicted RBP22.78■■□□□ 1.24
C19orf54-207ENST00000597507 CCDC87Q9NVE4 849 aa22.78■■□□□ 1.24
C19orf54-207ENST00000597507 ANKRD26Q9UPS8 1709 aa22.78■■□□□ 1.24
C19orf54-207ENST00000597507 RC3H1Q5TC82 1133 aaKnown RBP22.77■■□□□ 1.24
C19orf54-207ENST00000597507 KLRG1Q96E93 195 aa22.77■■□□□ 1.24
C19orf54-207ENST00000597507 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.24
C19orf54-207ENST00000597507 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
C19orf54-207ENST00000597507 COL5A3P25940 1745 aaPredicted RBP22.76■■□□□ 1.23
C19orf54-207ENST00000597507 RPS6KA4O75676 772 aa22.75■■□□□ 1.23
C19orf54-207ENST00000597507 ADRA2BP18089 450 aa22.75■■□□□ 1.23
C19orf54-207ENST00000597507 RFC4P35249 363 aa22.75■■□□□ 1.23
C19orf54-207ENST00000597507 JMYQ8N9B5 988 aa22.75■■□□□ 1.23
C19orf54-207ENST00000597507 PARP3Q9Y6F1 533 aa22.75■■□□□ 1.23
C19orf54-207ENST00000597507 ZNF831Q5JPB2 1677 aa22.74■■□□□ 1.23
C19orf54-207ENST00000597507 C16orf71Q8IYS4 520 aaPredicted RBP22.73■■□□□ 1.23
C19orf54-207ENST00000597507 POLKQ9UBT6 870 aa22.73■■□□□ 1.23
C19orf54-207ENST00000597507 CNTNAP4Q9C0A0 1308 aa22.73■■□□□ 1.23
C19orf54-207ENST00000597507 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 FSTL1Q12841 308 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 CDCA8Q53HL2 280 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 PIM2Q9P1W9 311 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 SBF1O95248 1867 aa22.72■■□□□ 1.23
C19orf54-207ENST00000597507 EIF4A2Q14240 407 aaKnown RBP22.71■■□□□ 1.23
C19orf54-207ENST00000597507 DCAF5Q96JK2 942 aa22.71■■□□□ 1.23
C19orf54-207ENST00000597507 RRAGCQ9HB90 399 aa22.71■■□□□ 1.23
C19orf54-207ENST00000597507 PLEKHG2Q9H7P9 1386 aa22.7■■□□□ 1.22
C19orf54-207ENST00000597507 DALRD3Q5D0E6 543 aaKnown RBP22.69■■□□□ 1.22
C19orf54-207ENST00000597507 RNF181Q9P0P0 153 aa22.69■■□□□ 1.22
C19orf54-207ENST00000597507 SRP68Q9UHB9 627 aaKnown RBP22.69■■□□□ 1.22
C19orf54-207ENST00000597507 KDM2BQ8NHM5 1336 aa22.68■■□□□ 1.22
C19orf54-207ENST00000597507 CAPN15O75808 1086 aa22.68■■□□□ 1.22
C19orf54-207ENST00000597507 CHRNA5P30532 468 aa22.67■■□□□ 1.22
C19orf54-207ENST00000597507 DDR1Q08345 913 aa22.67■■□□□ 1.22
C19orf54-207ENST00000597507 FKBP8Q14318 412 aa22.67■■□□□ 1.22
C19orf54-207ENST00000597507 PTCD1O75127 700 aaKnown RBP22.65■■□□□ 1.22
C19orf54-207ENST00000597507 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
C19orf54-207ENST00000597507 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.21
C19orf54-207ENST00000597507 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.21
C19orf54-207ENST00000597507 CRKLP46109 303 aaKnown RBP22.64■■□□□ 1.21
C19orf54-207ENST00000597507 CABP4P57796 275 aa22.64■■□□□ 1.21
C19orf54-207ENST00000597507 USP42Q9H9J4 1324 aaKnown RBP22.63■■□□□ 1.21
C19orf54-207ENST00000597507 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
C19orf54-207ENST00000597507 TNS4Q8IZW8 715 aa22.63■■□□□ 1.21
C19orf54-207ENST00000597507 PLEKHO1Q53GL0 409 aaPredicted RBP22.62■■□□□ 1.21
C19orf54-207ENST00000597507 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
C19orf54-207ENST00000597507 SMC1BQ8NDV3 1235 aa22.61■■□□□ 1.21
C19orf54-207ENST00000597507 POLRMTO00411 1230 aaKnown RBP22.6■■□□□ 1.21
C19orf54-207ENST00000597507 TM4SF1P30408 202 aa22.6■■□□□ 1.21
C19orf54-207ENST00000597507 NFATC2IPQ8NCF5 419 aa22.6■■□□□ 1.21
C19orf54-207ENST00000597507 MTHFSP49914 203 aa22.59■■□□□ 1.21
C19orf54-207ENST00000597507 PRELPP51888 382 aa22.59■■□□□ 1.21
C19orf54-207ENST00000597507 ADAMTS7Q9UKP4 1686 aa22.58■■□□□ 1.21
C19orf54-207ENST00000597507 TJP1Q07157 1748 aa22.58■■□□□ 1.21
C19orf54-207ENST00000597507 RASSF7Q02833 373 aa22.58■■□□□ 1.21
C19orf54-207ENST00000597507 INTS5Q6P9B9 1019 aaKnown RBP22.58■■□□□ 1.21
C19orf54-207ENST00000597507 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
C19orf54-207ENST00000597507 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
C19orf54-207ENST00000597507 AFDNP55196 1824 aaKnown RBP22.55■■□□□ 1.2
C19orf54-207ENST00000597507 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
C19orf54-207ENST00000597507 USPL1Q5W0Q7 1092 aa22.54■■□□□ 1.2
C19orf54-207ENST00000597507 GLTPD2A6NH11 291 aa22.53■■□□□ 1.2
C19orf54-207ENST00000597507 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
C19orf54-207ENST00000597507 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
C19orf54-207ENST00000597507 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
C19orf54-207ENST00000597507 ZC3H4Q9UPT8 1303 aaKnown RBP22.53■■□□□ 1.2
C19orf54-207ENST00000597507 ZPR1O75312 459 aa22.52■■□□□ 1.2
C19orf54-207ENST00000597507 LMNB1P20700 586 aa22.52■■□□□ 1.2
C19orf54-207ENST00000597507 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms