RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 ATP6V1AP38606 617 aa15.03■□□□□ -0
SHD-203ENST00000597466 ZNF526Q8TF50 670 aaPredicted RBP15.03■□□□□ -0
SHD-203ENST00000597466 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
SHD-203ENST00000597466 KDM6AO15550 1401 aaPredicted RBP15.01□□□□□ -0.01
SHD-203ENST00000597466 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
SHD-203ENST00000597466 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
SHD-203ENST00000597466 MMP10P09238 476 aa15□□□□□ -0.01
SHD-203ENST00000597466 PXDNLA1KZ92 1463 aa15□□□□□ -0.01
SHD-203ENST00000597466 N4BP2Q86UW6 1770 aaPredicted RBP14.99□□□□□ -0.01
SHD-203ENST00000597466 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
SHD-203ENST00000597466 HMGB2P26583 209 aaKnown RBP14.99□□□□□ -0.01
SHD-203ENST00000597466 AEBP1Q8IUX7 1158 aa14.99□□□□□ -0.01
SHD-203ENST00000597466 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
SHD-203ENST00000597466 GPBP1L1Q9HC44 474 aaPredicted RBP14.99□□□□□ -0.01
SHD-203ENST00000597466 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
SHD-203ENST00000597466 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
SHD-203ENST00000597466 PANK3Q9H999 370 aa14.98□□□□□ -0.01
SHD-203ENST00000597466 TIMELESSQ9UNS1 1208 aa14.98□□□□□ -0.01
SHD-203ENST00000597466 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
SHD-203ENST00000597466 C4AP0C0L4 1744 aa14.97□□□□□ -0.01
SHD-203ENST00000597466 MYH14Q7Z406 1995 aaKnown RBP14.96□□□□□ -0.01
SHD-203ENST00000597466 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.01
SHD-203ENST00000597466 C10orf71Q711Q0 1435 aa14.96□□□□□ -0.01
SHD-203ENST00000597466 ERVV-2B6SEH9 535 aa14.95□□□□□ -0.02
SHD-203ENST00000597466 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
SHD-203ENST00000597466 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
SHD-203ENST00000597466 RTCBQ9Y3I0 505 aaKnown RBP14.95□□□□□ -0.02
SHD-203ENST00000597466 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
SHD-203ENST00000597466 A0A0G2JLW4 131 aa14.94□□□□□ -0.02
SHD-203ENST00000597466 GYS1P13807 737 aa14.94□□□□□ -0.02
SHD-203ENST00000597466 TRAPPC3LQ5T215 181 aa14.94□□□□□ -0.02
SHD-203ENST00000597466 TJP1Q07157 1748 aa14.94□□□□□ -0.02
SHD-203ENST00000597466 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
SHD-203ENST00000597466 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
SHD-203ENST00000597466 CABP4P57796 275 aa14.93□□□□□ -0.02
SHD-203ENST00000597466 EIF4G2P78344 907 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHD-203ENST00000597466 PLEKHO1Q53GL0 409 aaPredicted RBP14.93□□□□□ -0.02
SHD-203ENST00000597466 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
SHD-203ENST00000597466 KIF3CO14782 793 aa14.92□□□□□ -0.02
SHD-203ENST00000597466 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
SHD-203ENST00000597466 BCS1LQ9Y276 419 aa14.92□□□□□ -0.02
SHD-203ENST00000597466 BRCA1P38398 1863 aaKnown RBP14.91□□□□□ -0.02
SHD-203ENST00000597466 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
SHD-203ENST00000597466 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
SHD-203ENST00000597466 DPEP1P16444 411 aa14.91□□□□□ -0.02
SHD-203ENST00000597466 RC3H1Q5TC82 1133 aaKnown RBP14.91□□□□□ -0.02
SHD-203ENST00000597466 SULT6B1Q6IMI4 303 aa14.91□□□□□ -0.02
SHD-203ENST00000597466 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
SHD-203ENST00000597466 NFATC2IPQ8NCF5 419 aa14.91□□□□□ -0.02
SHD-203ENST00000597466 HSPA6P17066 643 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 ADRA2BP18089 450 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 RFC4P35249 363 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 CRKLP46109 303 aaKnown RBP14.9□□□□□ -0.02
SHD-203ENST00000597466 MTHFSP49914 203 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 AMOTQ4VCS5 1084 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 ADAMTS7Q9UKP4 1686 aa14.9□□□□□ -0.02
SHD-203ENST00000597466 SCN11AQ9UI33 1791 aa14.89□□□□□ -0.03
SHD-203ENST00000597466 KCNA3P22001 575 aa14.89□□□□□ -0.03
SHD-203ENST00000597466 IL13P35225 146 aa14.89□□□□□ -0.03
SHD-203ENST00000597466 TGFB2P61812 414 aa14.89□□□□□ -0.03
SHD-203ENST00000597466 C1orf141Q5JVX7 400 aa14.89□□□□□ -0.03
SHD-203ENST00000597466 DDR1Q08345 913 aa14.88□□□□□ -0.03
SHD-203ENST00000597466 FKBP8Q14318 412 aa14.88□□□□□ -0.03
SHD-203ENST00000597466 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
SHD-203ENST00000597466 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
SHD-203ENST00000597466 USP42Q9H9J4 1324 aaKnown RBP14.87□□□□□ -0.03
SHD-203ENST00000597466 FCHSD2O94868 740 aa14.86□□□□□ -0.03
SHD-203ENST00000597466 INTS5Q6P9B9 1019 aaKnown RBP14.86□□□□□ -0.03
SHD-203ENST00000597466 ARHGAP27Q6ZUM4 889 aa14.86□□□□□ -0.03
SHD-203ENST00000597466 LGR6Q9HBX8 967 aa14.86□□□□□ -0.03
SHD-203ENST00000597466 MRC1P22897 1456 aa14.85□□□□□ -0.03
SHD-203ENST00000597466 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
SHD-203ENST00000597466 DNAJC10Q8IXB1 793 aa14.85□□□□□ -0.03
SHD-203ENST00000597466 NMRK2Q9NPI5 230 aa14.85□□□□□ -0.03
SHD-203ENST00000597466 ARFGEF1Q9Y6D6 1849 aa14.85□□□□□ -0.03
SHD-203ENST00000597466 KCPQ6ZWJ8 1503 aa14.84□□□□□ -0.03
SHD-203ENST00000597466 HMOX1P09601 288 aa14.84□□□□□ -0.03
SHD-203ENST00000597466 CHRNA5P30532 468 aa14.84□□□□□ -0.03
SHD-203ENST00000597466 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
SHD-203ENST00000597466 KNSTRNQ9Y448 316 aa14.84□□□□□ -0.03
SHD-203ENST00000597466 VIRMAQ69YN4 1812 aaKnown RBP14.84□□□□□ -0.03
SHD-203ENST00000597466 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.04
SHD-203ENST00000597466 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
SHD-203ENST00000597466 SLC52A2Q9HAB3 445 aa14.83□□□□□ -0.04
SHD-203ENST00000597466 POLRMTO00411 1230 aaKnown RBP14.82□□□□□ -0.04
SHD-203ENST00000597466 C9orf131Q5VYM1 1079 aa14.82□□□□□ -0.04
SHD-203ENST00000597466 USPL1Q5W0Q7 1092 aa14.82□□□□□ -0.04
SHD-203ENST00000597466 KIF7Q2M1P5 1343 aa14.82□□□□□ -0.04
SHD-203ENST00000597466 RNMTO43148 476 aaKnown RBP14.81□□□□□ -0.04
SHD-203ENST00000597466 CCER1Q8TC90 406 aaPredicted RBP14.81□□□□□ -0.04
SHD-203ENST00000597466 SOS1Q07889 1333 aaPredicted RBP14.81□□□□□ -0.04
SHD-203ENST00000597466 PCNTO95613 3336 aa14.8□□□□□ -0.04
SHD-203ENST00000597466 CYP19A1P11511 503 aaPredicted RBP14.8□□□□□ -0.04
SHD-203ENST00000597466 TM4SF1P30408 202 aa14.8□□□□□ -0.04
SHD-203ENST00000597466 PIM2Q9P1W9 311 aa14.8□□□□□ -0.04
SHD-203ENST00000597466 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
SHD-203ENST00000597466 AFDNP55196 1824 aaKnown RBP14.8□□□□□ -0.04
SHD-203ENST00000597466 TOMM70O94826 608 aa14.79□□□□□ -0.04
SHD-203ENST00000597466 COL15A1P39059 1388 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms