RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 SENP3-EIF4A1A0A087X0R7 540 aa21.85■■□□□ 1.09
LINC02560-201ENST00000596379 GIGYF1O75420 1035 aaPredicted RBP21.85■■□□□ 1.09
LINC02560-201ENST00000596379 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
LINC02560-201ENST00000596379 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
LINC02560-201ENST00000596379 PLEKHG2Q9H7P9 1386 aa21.84■■□□□ 1.09
LINC02560-201ENST00000596379 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
LINC02560-201ENST00000596379 MORC1Q86VD1 984 aa21.83■■□□□ 1.09
LINC02560-201ENST00000596379 DCAF5Q96JK2 942 aa21.83■■□□□ 1.09
LINC02560-201ENST00000596379 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
LINC02560-201ENST00000596379 RBM42Q9BTD8 480 aaKnown RBP21.82■■□□□ 1.08
LINC02560-201ENST00000596379 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
LINC02560-201ENST00000596379 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
LINC02560-201ENST00000596379 WWC3Q9ULE0 1092 aa21.81■■□□□ 1.08
LINC02560-201ENST00000596379 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
LINC02560-201ENST00000596379 AEBP1Q8IUX7 1158 aa21.8■■□□□ 1.08
LINC02560-201ENST00000596379 KDRP35968 1356 aa21.79■■□□□ 1.08
LINC02560-201ENST00000596379 CABP4P57796 275 aa21.79■■□□□ 1.08
LINC02560-201ENST00000596379 TRAPPC3LQ5T215 181 aa21.79■■□□□ 1.08
LINC02560-201ENST00000596379 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
LINC02560-201ENST00000596379 KNSTRNQ9Y448 316 aa21.78■■□□□ 1.08
LINC02560-201ENST00000596379 MMP10P09238 476 aa21.77■■□□□ 1.08
LINC02560-201ENST00000596379 MTHFSP49914 203 aa21.77■■□□□ 1.08
LINC02560-201ENST00000596379 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
LINC02560-201ENST00000596379 ATP10DQ9P241 1426 aa21.77■■□□□ 1.08
LINC02560-201ENST00000596379 RC3H1Q5TC82 1133 aaKnown RBP21.76■■□□□ 1.07
LINC02560-201ENST00000596379 SULT6B1Q6IMI4 303 aa21.76■■□□□ 1.07
LINC02560-201ENST00000596379 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
LINC02560-201ENST00000596379 ZNF831Q5JPB2 1677 aa21.75■■□□□ 1.07
LINC02560-201ENST00000596379 C1orf141Q5JVX7 400 aa21.75■■□□□ 1.07
LINC02560-201ENST00000596379 NLGN1Q8N2Q7 840 aa21.74■■□□□ 1.07
LINC02560-201ENST00000596379 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
LINC02560-201ENST00000596379 RPS6KA4O75676 772 aa21.73■■□□□ 1.07
LINC02560-201ENST00000596379 IL13P35225 146 aa21.73■■□□□ 1.07
LINC02560-201ENST00000596379 NFATC2IPQ8NCF5 419 aa21.73■■□□□ 1.07
LINC02560-201ENST00000596379 CNTNAP4Q9C0A0 1308 aa21.73■■□□□ 1.07
LINC02560-201ENST00000596379 MYH14Q7Z406 1995 aaKnown RBP21.72■■□□□ 1.07
LINC02560-201ENST00000596379 PTCD1O75127 700 aaKnown RBP21.72■■□□□ 1.07
LINC02560-201ENST00000596379 ADRA2BP18089 450 aa21.72■■□□□ 1.07
LINC02560-201ENST00000596379 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
LINC02560-201ENST00000596379 RFC4P35249 363 aa21.71■■□□□ 1.07
LINC02560-201ENST00000596379 GYS1P13807 737 aa21.7■■□□□ 1.06
LINC02560-201ENST00000596379 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
LINC02560-201ENST00000596379 ZNF526Q8TF50 670 aaPredicted RBP21.7■■□□□ 1.06
LINC02560-201ENST00000596379 ADCY9O60503 1353 aa21.7■■□□□ 1.06
LINC02560-201ENST00000596379 CICQ96RK0 1608 aaPredicted RBP21.69■■□□□ 1.06
LINC02560-201ENST00000596379 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
LINC02560-201ENST00000596379 TGFB2P61812 414 aa21.69■■□□□ 1.06
LINC02560-201ENST00000596379 A0A0G2JLW4 131 aa21.68■■□□□ 1.06
LINC02560-201ENST00000596379 N4BP2Q86UW6 1770 aaPredicted RBP21.68■■□□□ 1.06
LINC02560-201ENST00000596379 PXDNLA1KZ92 1463 aa21.67■■□□□ 1.06
LINC02560-201ENST00000596379 KIF7Q2M1P5 1343 aa21.67■■□□□ 1.06
LINC02560-201ENST00000596379 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
LINC02560-201ENST00000596379 CCDC87Q9NVE4 849 aa21.67■■□□□ 1.06
LINC02560-201ENST00000596379 PARP3Q9Y6F1 533 aa21.67■■□□□ 1.06
LINC02560-201ENST00000596379 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
LINC02560-201ENST00000596379 KIAA1551Q9HCM1 1747 aa21.66■■□□□ 1.06
LINC02560-201ENST00000596379 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
LINC02560-201ENST00000596379 BCS1LQ9Y276 419 aa21.65■■□□□ 1.06
LINC02560-201ENST00000596379 C4AP0C0L4 1744 aa21.65■■□□□ 1.06
LINC02560-201ENST00000596379 C10orf71Q711Q0 1435 aa21.64■■□□□ 1.06
LINC02560-201ENST00000596379 DPEP1P16444 411 aa21.64■■□□□ 1.05
LINC02560-201ENST00000596379 LGR6Q9HBX8 967 aa21.64■■□□□ 1.05
LINC02560-201ENST00000596379 HMOX1P09601 288 aa21.63■■□□□ 1.05
LINC02560-201ENST00000596379 SLC52A2Q9HAB3 445 aa21.63■■□□□ 1.05
LINC02560-201ENST00000596379 SRP68Q9UHB9 627 aaKnown RBP21.63■■□□□ 1.05
LINC02560-201ENST00000596379 TJP1Q07157 1748 aa21.63■■□□□ 1.05
LINC02560-201ENST00000596379 PER1O15534 1290 aaPredicted RBP21.62■■□□□ 1.05
LINC02560-201ENST00000596379 FKBP8Q14318 412 aa21.61■■□□□ 1.05
LINC02560-201ENST00000596379 INTS5Q6P9B9 1019 aaKnown RBP21.61■■□□□ 1.05
LINC02560-201ENST00000596379 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
LINC02560-201ENST00000596379 FCHSD2O94868 740 aa21.6■■□□□ 1.05
LINC02560-201ENST00000596379 CC2D1BQ5T0F9 858 aaKnown RBP21.6■■□□□ 1.05
LINC02560-201ENST00000596379 ARHGAP27Q6ZUM4 889 aa21.6■■□□□ 1.05
LINC02560-201ENST00000596379 DNAJC10Q8IXB1 793 aa21.6■■□□□ 1.05
LINC02560-201ENST00000596379 USP42Q9H9J4 1324 aaKnown RBP21.59■■□□□ 1.05
LINC02560-201ENST00000596379 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
LINC02560-201ENST00000596379 KCNA3P22001 575 aa21.59■■□□□ 1.05
LINC02560-201ENST00000596379 SLC39A6Q13433 755 aa21.59■■□□□ 1.05
LINC02560-201ENST00000596379 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
LINC02560-201ENST00000596379 DDR1Q08345 913 aa21.58■■□□□ 1.05
LINC02560-201ENST00000596379 MTHFSDQ2M296 383 aaKnown RBP21.58■■□□□ 1.05
LINC02560-201ENST00000596379 BRCA1P38398 1863 aaKnown RBP21.58■■□□□ 1.04
LINC02560-201ENST00000596379 KIF3CO14782 793 aa21.56■■□□□ 1.04
LINC02560-201ENST00000596379 PIM2Q9P1W9 311 aa21.56■■□□□ 1.04
LINC02560-201ENST00000596379 ZPR1O75312 459 aa21.55■■□□□ 1.04
LINC02560-201ENST00000596379 CYP19A1P11511 503 aaPredicted RBP21.55■■□□□ 1.04
LINC02560-201ENST00000596379 HSPA6P17066 643 aa21.55■■□□□ 1.04
LINC02560-201ENST00000596379 TM4SF1P30408 202 aa21.55■■□□□ 1.04
LINC02560-201ENST00000596379 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
LINC02560-201ENST00000596379 USPL1Q5W0Q7 1092 aa21.54■■□□□ 1.04
LINC02560-201ENST00000596379 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
LINC02560-201ENST00000596379 MRC1P22897 1456 aa21.53■■□□□ 1.04
LINC02560-201ENST00000596379 POLRMTO00411 1230 aaKnown RBP21.53■■□□□ 1.04
LINC02560-201ENST00000596379 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
LINC02560-201ENST00000596379 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
LINC02560-201ENST00000596379 ARFGEF1Q9Y6D6 1849 aa21.52■■□□□ 1.04
LINC02560-201ENST00000596379 KCPQ6ZWJ8 1503 aa21.51■■□□□ 1.03
LINC02560-201ENST00000596379 CHRNA5P30532 468 aa21.51■■□□□ 1.03
LINC02560-201ENST00000596379 ZBTB1Q9Y2K1 713 aa21.51■■□□□ 1.03
LINC02560-201ENST00000596379 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms