RNA–Protein interactions for RNA: ENST00000594780.1

CLPP-202, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

TSL 2

Gene CLPP, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-202ENST00000594780 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
CLPP-202ENST00000594780 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
CLPP-202ENST00000594780 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
CLPP-202ENST00000594780 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
CLPP-202ENST00000594780 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
CLPP-202ENST00000594780 COL13A1Q5TAT6 717 aaPredicted RBP17.33■□□□□ 0.36
CLPP-202ENST00000594780 MSL1Q68DK7 614 aa17.33■□□□□ 0.36
CLPP-202ENST00000594780 CFAP53Q96M91 514 aa17.33■□□□□ 0.36
CLPP-202ENST00000594780 CAPN15O75808 1086 aa17.32■□□□□ 0.36
CLPP-202ENST00000594780 HMOX1P09601 288 aa17.32■□□□□ 0.36
CLPP-202ENST00000594780 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
CLPP-202ENST00000594780 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
CLPP-202ENST00000594780 APLP1P51693 650 aa17.31■□□□□ 0.36
CLPP-202ENST00000594780 PLEKHO1Q53GL0 409 aaPredicted RBP17.31■□□□□ 0.36
CLPP-202ENST00000594780 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
CLPP-202ENST00000594780 U2SURPO15042 1029 aaKnown RBP17.3■□□□□ 0.36
CLPP-202ENST00000594780 PHKG2P15735 406 aa17.3■□□□□ 0.36
CLPP-202ENST00000594780 AMOTQ4VCS5 1084 aa17.3■□□□□ 0.36
CLPP-202ENST00000594780 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
CLPP-202ENST00000594780 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
CLPP-202ENST00000594780 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
CLPP-202ENST00000594780 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
CLPP-202ENST00000594780 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
CLPP-202ENST00000594780 UBR3Q6ZT12 1888 aa17.27■□□□□ 0.36
CLPP-202ENST00000594780 NUDCQ9Y266 331 aa17.27■□□□□ 0.36
CLPP-202ENST00000594780 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
CLPP-202ENST00000594780 ZNF530Q6P9A1 599 aaPredicted RBP17.26■□□□□ 0.35
CLPP-202ENST00000594780 MSH5O43196 834 aa17.25■□□□□ 0.35
CLPP-202ENST00000594780 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
CLPP-202ENST00000594780 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
CLPP-202ENST00000594780 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLPP-202ENST00000594780 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
CLPP-202ENST00000594780 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
CLPP-202ENST00000594780 ITGB4P16144 1822 aa17.24■□□□□ 0.35
CLPP-202ENST00000594780 N4BP2Q86UW6 1770 aaPredicted RBP17.23■□□□□ 0.35
CLPP-202ENST00000594780 HTRA3P83110 453 aa17.23■□□□□ 0.35
CLPP-202ENST00000594780 MPRIPQ6WCQ1 1025 aa17.23■□□□□ 0.35
CLPP-202ENST00000594780 CCNL1Q9UK58 526 aaPredicted RBP17.23■□□□□ 0.35
CLPP-202ENST00000594780 C4BP0C0L5 1744 aa17.23■□□□□ 0.35
CLPP-202ENST00000594780 FCHSD2O94868 740 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
CLPP-202ENST00000594780 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 PRELPP51888 382 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 PIGBQ92521 554 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
CLPP-202ENST00000594780 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
CLPP-202ENST00000594780 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
CLPP-202ENST00000594780 AKAP4Q5JQC9 854 aa17.21■□□□□ 0.35
CLPP-202ENST00000594780 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
CLPP-202ENST00000594780 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
CLPP-202ENST00000594780 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
CLPP-202ENST00000594780 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
CLPP-202ENST00000594780 TOMM70O94826 608 aa17.19■□□□□ 0.34
CLPP-202ENST00000594780 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
CLPP-202ENST00000594780 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
CLPP-202ENST00000594780 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
CLPP-202ENST00000594780 KLRG1Q96E93 195 aa17.18■□□□□ 0.34
CLPP-202ENST00000594780 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
CLPP-202ENST00000594780 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
CLPP-202ENST00000594780 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
CLPP-202ENST00000594780 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
CLPP-202ENST00000594780 SCN11AQ9UI33 1791 aa17.16■□□□□ 0.34
CLPP-202ENST00000594780 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
CLPP-202ENST00000594780 CABP4P57796 275 aa17.16■□□□□ 0.34
CLPP-202ENST00000594780 PLEKHF1Q96S99 279 aa17.16■□□□□ 0.34
CLPP-202ENST00000594780 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
CLPP-202ENST00000594780 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
CLPP-202ENST00000594780 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
CLPP-202ENST00000594780 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
CLPP-202ENST00000594780 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
CLPP-202ENST00000594780 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
CLPP-202ENST00000594780 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
CLPP-202ENST00000594780 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
CLPP-202ENST00000594780 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
CLPP-202ENST00000594780 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
CLPP-202ENST00000594780 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
CLPP-202ENST00000594780 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
CLPP-202ENST00000594780 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
CLPP-202ENST00000594780 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
CLPP-202ENST00000594780 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
CLPP-202ENST00000594780 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
CLPP-202ENST00000594780 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLPP-202ENST00000594780 WDR43Q15061 677 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLPP-202ENST00000594780 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
CLPP-202ENST00000594780 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
CLPP-202ENST00000594780 ZBED9Q6R2W3 1325 aa17.1■□□□□ 0.33
CLPP-202ENST00000594780 MRC1P22897 1456 aa17.1■□□□□ 0.33
CLPP-202ENST00000594780 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
CLPP-202ENST00000594780 SLC34A2O95436 690 aa17.09■□□□□ 0.33
CLPP-202ENST00000594780 SIK1P57059 783 aa17.09■□□□□ 0.33
CLPP-202ENST00000594780 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
CLPP-202ENST00000594780 SBF1O95248 1867 aa17.09■□□□□ 0.33
CLPP-202ENST00000594780 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
CLPP-202ENST00000594780 CEMIPQ8WUJ3 1361 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms