RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
SIN3B-204ENST00000594372 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SIN3B-204ENST00000594372 MMP10P09238 476 aa17.03■□□□□ 0.32
SIN3B-204ENST00000594372 PHKG2P15735 406 aa17.03■□□□□ 0.32
SIN3B-204ENST00000594372 SSFA2P28290 1259 aa17.03■□□□□ 0.32
SIN3B-204ENST00000594372 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
SIN3B-204ENST00000594372 HSPA6P17066 643 aa17.02■□□□□ 0.32
SIN3B-204ENST00000594372 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
SIN3B-204ENST00000594372 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
SIN3B-204ENST00000594372 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
SIN3B-204ENST00000594372 KIF3CO14782 793 aa17.01■□□□□ 0.31
SIN3B-204ENST00000594372 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
SIN3B-204ENST00000594372 KDRP35968 1356 aa17.01■□□□□ 0.31
SIN3B-204ENST00000594372 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
SIN3B-204ENST00000594372 SLC24A1O60721 1099 aa17■□□□□ 0.31
SIN3B-204ENST00000594372 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
SIN3B-204ENST00000594372 TJP1Q07157 1748 aa16.99■□□□□ 0.31
SIN3B-204ENST00000594372 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
SIN3B-204ENST00000594372 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
SIN3B-204ENST00000594372 SBF1O95248 1867 aa16.98■□□□□ 0.31
SIN3B-204ENST00000594372 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
SIN3B-204ENST00000594372 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
SIN3B-204ENST00000594372 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
SIN3B-204ENST00000594372 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
SIN3B-204ENST00000594372 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
SIN3B-204ENST00000594372 DPEP1P16444 411 aa16.96■□□□□ 0.31
SIN3B-204ENST00000594372 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
SIN3B-204ENST00000594372 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
SIN3B-204ENST00000594372 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
SIN3B-204ENST00000594372 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
SIN3B-204ENST00000594372 AEBP1Q8IUX7 1158 aa16.95■□□□□ 0.3
SIN3B-204ENST00000594372 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
SIN3B-204ENST00000594372 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
SIN3B-204ENST00000594372 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
SIN3B-204ENST00000594372 AFDNP55196 1824 aaKnown RBP16.95■□□□□ 0.3
SIN3B-204ENST00000594372 WDR90Q96KV7 1748 aa16.95■□□□□ 0.3
SIN3B-204ENST00000594372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.34e-6■□□□□ 9.7
SIN3B-204ENST00000594372 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
SIN3B-204ENST00000594372 FCHSD2O94868 740 aa16.93■□□□□ 0.3
SIN3B-204ENST00000594372 GYS1P13807 737 aa16.93■□□□□ 0.3
SIN3B-204ENST00000594372 HTRA3P83110 453 aa16.93■□□□□ 0.3
SIN3B-204ENST00000594372 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
SIN3B-204ENST00000594372 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
SIN3B-204ENST00000594372 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
SIN3B-204ENST00000594372 RFC4P35249 363 aa16.9■□□□□ 0.3
SIN3B-204ENST00000594372 CABP4P57796 275 aa16.9■□□□□ 0.3
SIN3B-204ENST00000594372 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
SIN3B-204ENST00000594372 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
SIN3B-204ENST00000594372 KCNA3P22001 575 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 DDR1Q08345 913 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 FKBP8Q14318 412 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
SIN3B-204ENST00000594372 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 RPS6KA4O75676 772 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 CHRNA5P30532 468 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 TGFB2P61812 414 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 DCAF5Q96JK2 942 aa16.88■□□□□ 0.29
SIN3B-204ENST00000594372 CRKLP46109 303 aaKnown RBP16.87■□□□□ 0.29
SIN3B-204ENST00000594372 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
SIN3B-204ENST00000594372 PANK3Q9H999 370 aa16.87■□□□□ 0.29
SIN3B-204ENST00000594372 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
SIN3B-204ENST00000594372 MTHFSP49914 203 aa16.86■□□□□ 0.29
SIN3B-204ENST00000594372 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
SIN3B-204ENST00000594372 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
SIN3B-204ENST00000594372 PCNTO95613 3336 aa16.85■□□□□ 0.29
SIN3B-204ENST00000594372 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
SIN3B-204ENST00000594372 DLEC1Q9Y238 1755 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 TOMM70O94826 608 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 ADRA2BP18089 450 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 APLP1P51693 650 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 SULT6B1Q6IMI4 303 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 TIAM2Q8IVF5 1701 aa16.84■□□□□ 0.29
SIN3B-204ENST00000594372 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
SIN3B-204ENST00000594372 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.28
SIN3B-204ENST00000594372 RASSF7Q02833 373 aa16.83■□□□□ 0.28
SIN3B-204ENST00000594372 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
SIN3B-204ENST00000594372 RNF181Q9P0P0 153 aa16.83■□□□□ 0.28
SIN3B-204ENST00000594372 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
SIN3B-204ENST00000594372 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
SIN3B-204ENST00000594372 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
SIN3B-204ENST00000594372 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
SIN3B-204ENST00000594372 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
SIN3B-204ENST00000594372 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
SIN3B-204ENST00000594372 ANKRD31Q8N7Z5 1873 aa16.82■□□□□ 0.28
SIN3B-204ENST00000594372 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
SIN3B-204ENST00000594372 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
SIN3B-204ENST00000594372 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SIN3B-204ENST00000594372 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
SIN3B-204ENST00000594372 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
SIN3B-204ENST00000594372 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
SIN3B-204ENST00000594372 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
SIN3B-204ENST00000594372 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
SIN3B-204ENST00000594372 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
SIN3B-204ENST00000594372 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
SIN3B-204ENST00000594372 COL11A2P13942 1736 aaPredicted RBP16.79■□□□□ 0.28
SIN3B-204ENST00000594372 HMOX1P09601 288 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms