RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
LRMDA-209ENST00000593699 COL3A1P02461 1466 aaPredicted RBP14.77□□□□□ -0.04
LRMDA-209ENST00000593699 SSFA2P28290 1259 aa14.77□□□□□ -0.05
LRMDA-209ENST00000593699 ATP6V1AP38606 617 aa14.77□□□□□ -0.05
LRMDA-209ENST00000593699 CNGB1Q14028 1251 aaPredicted RBP14.77□□□□□ -0.05
LRMDA-209ENST00000593699 COL23A1Q86Y22 540 aaPredicted RBP14.77□□□□□ -0.05
LRMDA-209ENST00000593699 CFAP53Q96M91 514 aa14.77□□□□□ -0.05
LRMDA-209ENST00000593699 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
LRMDA-209ENST00000593699 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
LRMDA-209ENST00000593699 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
LRMDA-209ENST00000593699 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
LRMDA-209ENST00000593699 MRC1P22897 1456 aa14.76□□□□□ -0.05
LRMDA-209ENST00000593699 COL5A3P25940 1745 aaPredicted RBP14.75□□□□□ -0.05
LRMDA-209ENST00000593699 GNPATO15228 680 aa14.75□□□□□ -0.05
LRMDA-209ENST00000593699 PHF14O94880 888 aa14.75□□□□□ -0.05
LRMDA-209ENST00000593699 HMOX1P09601 288 aa14.75□□□□□ -0.05
LRMDA-209ENST00000593699 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
LRMDA-209ENST00000593699 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
LRMDA-209ENST00000593699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
LRMDA-209ENST00000593699 YY1P25490 414 aa14.74□□□□□ -0.05
LRMDA-209ENST00000593699 MSL1Q68DK7 614 aa14.74□□□□□ -0.05
LRMDA-209ENST00000593699 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
LRMDA-209ENST00000593699 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
LRMDA-209ENST00000593699 ADAMTS7Q9UKP4 1686 aa14.72□□□□□ -0.05
LRMDA-209ENST00000593699 VIRMAQ69YN4 1812 aaKnown RBP14.72□□□□□ -0.05
LRMDA-209ENST00000593699 ITPK1Q13572 414 aa14.72□□□□□ -0.05
LRMDA-209ENST00000593699 CNTNAP4Q9C0A0 1308 aa14.71□□□□□ -0.05
LRMDA-209ENST00000593699 NUDCQ9Y266 331 aa14.71□□□□□ -0.05
LRMDA-209ENST00000593699 RTCBQ9Y3I0 505 aaKnown RBP14.71□□□□□ -0.05
LRMDA-209ENST00000593699 TJP1Q07157 1748 aa14.71□□□□□ -0.05
LRMDA-209ENST00000593699 ADRA2BP18089 450 aa14.7□□□□□ -0.06
LRMDA-209ENST00000593699 GPR162Q16538 588 aa14.7□□□□□ -0.06
LRMDA-209ENST00000593699 GAS2L2Q8NHY3 880 aa14.7□□□□□ -0.06
LRMDA-209ENST00000593699 PTCD1O75127 700 aaKnown RBP14.69□□□□□ -0.06
LRMDA-209ENST00000593699 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
LRMDA-209ENST00000593699 NFATC2IPQ8NCF5 419 aa14.69□□□□□ -0.06
LRMDA-209ENST00000593699 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
LRMDA-209ENST00000593699 RC3H1Q5TC82 1133 aaKnown RBP14.68□□□□□ -0.06
LRMDA-209ENST00000593699 C4AP0C0L4 1744 aa14.68□□□□□ -0.06
LRMDA-209ENST00000593699 RNMTO43148 476 aaKnown RBP14.67□□□□□ -0.06
LRMDA-209ENST00000593699 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
LRMDA-209ENST00000593699 TRAPPC3LQ5T215 181 aa14.67□□□□□ -0.06
LRMDA-209ENST00000593699 CD2APQ9Y5K6 639 aa14.67□□□□□ -0.06
LRMDA-209ENST00000593699 CHD4Q14839 1912 aa14.66□□□□□ -0.06
LRMDA-209ENST00000593699 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
LRMDA-209ENST00000593699 AMIGO3Q86WK7 504 aa14.66□□□□□ -0.06
LRMDA-209ENST00000593699 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 RFC4P35249 363 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 CRKLP46109 303 aaKnown RBP14.65□□□□□ -0.06
LRMDA-209ENST00000593699 TEFQ10587 303 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 TTC5Q8N0Z6 440 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 NLGN2Q8NFZ4 835 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 SLC4A9Q96Q91 983 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 KCPQ6ZWJ8 1503 aa14.65□□□□□ -0.06
LRMDA-209ENST00000593699 GNAT3A8MTJ3 354 aa14.64□□□□□ -0.07
LRMDA-209ENST00000593699 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
LRMDA-209ENST00000593699 NEFMP07197 916 aa14.64□□□□□ -0.07
LRMDA-209ENST00000593699 NLGN1Q8N2Q7 840 aa14.64□□□□□ -0.07
LRMDA-209ENST00000593699 GRIN3BO60391 1043 aa14.63□□□□□ -0.07
LRMDA-209ENST00000593699 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
LRMDA-209ENST00000593699 PRKAR2BP31323 418 aa14.63□□□□□ -0.07
LRMDA-209ENST00000593699 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
LRMDA-209ENST00000593699 SMIM5Q71RC9 77 aa14.63□□□□□ -0.07
LRMDA-209ENST00000593699 LGR6Q9HBX8 967 aa14.63□□□□□ -0.07
LRMDA-209ENST00000593699 SIPA1L3O60292 1781 aaPredicted RBP14.62□□□□□ -0.07
LRMDA-209ENST00000593699 MMP10P09238 476 aa14.62□□□□□ -0.07
LRMDA-209ENST00000593699 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
LRMDA-209ENST00000593699 CCDC87Q9NVE4 849 aa14.62□□□□□ -0.07
LRMDA-209ENST00000593699 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
LRMDA-209ENST00000593699 ARHGEF1Q92888 912 aaKnown RBP14.61□□□□□ -0.07
LRMDA-209ENST00000593699 MYH14Q7Z406 1995 aaKnown RBP14.6□□□□□ -0.07
LRMDA-209ENST00000593699 C10orf71Q711Q0 1435 aa14.6□□□□□ -0.07
LRMDA-209ENST00000593699 KIF13BQ9NQT8 1826 aa14.6□□□□□ -0.07
LRMDA-209ENST00000593699 RTF1Q92541 710 aaKnown RBP14.6□□□□□ -0.07
LRMDA-209ENST00000593699 PARP3Q9Y6F1 533 aa14.6□□□□□ -0.07
LRMDA-209ENST00000593699 FCHSD2O94868 740 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 GYS1P13807 737 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 SLC39A6Q13433 755 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 DNAJC10Q8IXB1 793 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
LRMDA-209ENST00000593699 COL15A1P39059 1388 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 CEMIPQ8WUJ3 1361 aa14.59□□□□□ -0.07
LRMDA-209ENST00000593699 ZPR1O75312 459 aa14.58□□□□□ -0.08
LRMDA-209ENST00000593699 STARD3NLO95772 234 aa14.58□□□□□ -0.08
LRMDA-209ENST00000593699 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.08
LRMDA-209ENST00000593699 CYP19A1P11511 503 aaPredicted RBP14.57□□□□□ -0.08
LRMDA-209ENST00000593699 TEX13AQ9BXU3 409 aaPredicted RBP14.57□□□□□ -0.08
LRMDA-209ENST00000593699 HEG1Q9ULI3 1381 aa14.57□□□□□ -0.08
LRMDA-209ENST00000593699 PXDNLA1KZ92 1463 aa14.57□□□□□ -0.08
LRMDA-209ENST00000593699 SCN7AQ01118 1682 aa14.56□□□□□ -0.08
LRMDA-209ENST00000593699 YBX3P16989 372 aaKnown RBP eCLIP14.56□□□□□ -0.08
LRMDA-209ENST00000593699 INTS5Q6P9B9 1019 aaKnown RBP14.56□□□□□ -0.08
LRMDA-209ENST00000593699 ZNF790Q6PG37 636 aa14.56□□□□□ -0.08
LRMDA-209ENST00000593699 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
LRMDA-209ENST00000593699 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
LRMDA-209ENST00000593699 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
LRMDA-209ENST00000593699 BTBD11A6QL63 1104 aa14.55□□□□□ -0.08
LRMDA-209ENST00000593699 RALBP1Q15311 655 aa14.55□□□□□ -0.08
LRMDA-209ENST00000593699 ZNF784Q8NCA9 323 aaPredicted RBP14.55□□□□□ -0.08
LRMDA-209ENST00000593699 IL17REQ8NFR9 667 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms