RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, human

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDLRAD4-218	ENST00000592991	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.06	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	KCNQ3	O43525	872 aa		33.05	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	BTBD11	A6QL63	1104 aa		33.04	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	PLIN1	O60240	522 aa		33.04	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	SLC52A2	Q9HAB3	445 aa		33.04	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	ATRN	O75882	1429 aa		33.04	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	NKX1-1	Q15270	411 aa	Predicted RBP	33.03	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	DDB1	Q16531	1140 aa		33.03	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	TWISTNB	Q3B726	338 aa	Predicted RBP	33.02	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	NFATC2IP	Q8NCF5	419 aa		33.02	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	VAMP4	O75379	141 aa		33.02	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	CT47B1	P0C2W7	299 aa	Predicted RBP	33.02	■■■□□ 2.88
LDLRAD4-218	ENST00000592991	BABAM1	Q9NWV8	329 aa		33.01	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	NEFL	P07196	543 aa		32.99	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	FKBP8	Q14318	412 aa		32.99	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	CABP4	P57796	275 aa		32.99	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	GJD4	Q96KN9	370 aa	Predicted RBP	32.99	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	TRPC5	Q9UL62	973 aa	Predicted RBP	32.99	■■■□□ 2.87
LDLRAD4-218	ENST00000592991		A0A0G2JS52	829 aa		32.98	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	TCERG1	O14776	1098 aa	Known RBP	32.98	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	MYT1	Q01538	1121 aa		32.98	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	SSH1	Q8WYL5	1049 aa		32.98	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	THSD7A	Q9UPZ6	1657 aa		32.97	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	SLC39A6	Q13433	755 aa		32.97	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	SMC4	Q9NTJ3	1288 aa		32.95	■■■□□ 2.87
LDLRAD4-218	ENST00000592991	EIF4A1	P60842	406 aa	Known RBP	32.95	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	MARCH10	Q8NA82	808 aa	Predicted RBP	32.95	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	QTRT2	Q9H974	415 aa	Known RBP	32.94	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	DOT1L	Q8TEK3	1739 aa		32.93	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	ITGB4	P16144	1822 aa		32.93	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	KAT6B	Q8WYB5	2073 aa		32.93	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	ERVV-2	B6SEH9	535 aa		32.93	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	FRAT1	Q92837	279 aa	Predicted RBP	32.9	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	C20orf194	Q5TEA3	1177 aa		32.89	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	ZNF790	Q6PG37	636 aa		32.89	■■■□□ 2.86
LDLRAD4-218	ENST00000592991	ALDH1L2	Q3SY69	923 aa		32.88	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	PAPPA	Q13219	1627 aa		32.87	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	NECTIN2	Q92692	538 aa		32.87	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	ZNF428	Q96B54	188 aa		32.86	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	TMOD3	Q9NYL9	352 aa		32.86	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	CANX	P27824	592 aa	Known RBP	32.85	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	MRPL50	Q8N5N7	158 aa	Known RBP	32.85	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	TNN	Q9UQP3	1299 aa		32.85	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	C5	P01031	1676 aa		32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	PRAMEF22	A3QJZ6	481 aa		32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	PIGB	Q92521	554 aa		32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	SYTL4	Q96C24	671 aa	Predicted RBP	32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	ACSBG1	Q96GR2	724 aa		32.84	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	TTC5	Q8N0Z6	440 aa		32.83	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	ZNF496	Q96IT1	587 aa	Predicted RBP	32.83	■■■□□ 2.85
LDLRAD4-218	ENST00000592991	HEG1	Q9ULI3	1381 aa		32.82	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	UBR2	Q8IWV8	1755 aa		32.82	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	PRIM1	P49642	420 aa	Known RBP	32.81	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	SEPT12	Q8IYM1	358 aa		32.81	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	NOB1	Q9ULX3	412 aa	Known RBP	32.81	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	ONECUT3	O60422	494 aa	Predicted RBP	32.8	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	GIGYF1	O75420	1035 aa	Predicted RBP	32.8	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	ZNF772	Q68DY9	489 aa	Predicted RBP	32.8	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	KCP	Q6ZWJ8	1503 aa		32.79	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	BCL9	O00512	1426 aa		32.79	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	EIF2S2	P20042	333 aa	Known RBP	32.79	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	FAM182B	Q5T319	152 aa		32.79	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	HDGFL1	Q5TGJ6	251 aa		32.77	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	ASAP1	Q9ULH1	1129 aa		32.77	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	KIF16B	Q96L93	1317 aa		32.77	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	CRBN	Q96SW2	442 aa		32.77	■■■□□ 2.84
LDLRAD4-218	ENST00000592991	SOS1	Q07889	1333 aa	Predicted RBP	32.76	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	ZKSCAN2	Q63HK3	967 aa		32.76	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	PANK1	Q8TE04	598 aa		32.76	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	BRPF1	P55201	1214 aa	Predicted RBP	32.75	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	CLUAP1	Q96AJ1	413 aa		32.75	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	FMNL2	Q96PY5	1086 aa		32.75	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	BRWD3	Q6RI45	1802 aa		32.75	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	PTCD1	O75127	700 aa	Known RBP	32.74	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	HOXB7	P09629	217 aa		32.74	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	CCDC30	Q5VVM6	783 aa		32.74	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	EXOC6	Q8TAG9	804 aa		32.74	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	SLC4A2	P04920	1241 aa		32.73	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	RLBP1	P12271	317 aa		32.73	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	ATG3	Q9NT62	314 aa		32.73	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	TRIM27	P14373	513 aa		32.73	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	KCNQ2	O43526	872 aa		32.72	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	G2E3	Q7L622	706 aa		32.72	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	STK31	Q9BXU1	1019 aa		32.71	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	RGS17	Q9UGC6	210 aa	Predicted RBP	32.71	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	RBM6	P78332	1123 aa	Known RBP	32.7	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	ATF7IP	Q6VMQ6	1270 aa		32.7	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	CHPF2	Q9P2E5	772 aa		32.7	■■■□□ 2.83
LDLRAD4-218	ENST00000592991	LAMB4	A4D0S4	1761 aa		32.69	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	ANXA1	P04083	346 aa		32.69	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	SNRPA1	P09661	255 aa	Known RBP	32.69	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	PDE3A	Q14432	1141 aa		32.67	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	USP16	Q9Y5T5	823 aa		32.67	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	CACNA1F	O60840	1977 aa		32.67	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	IPO8	O15397	1037 aa	Known RBP	32.66	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	PTF1A	Q7RTS3	328 aa		32.66	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	COG6	Q9Y2V7	657 aa		32.66	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	FTSJ3	Q8IY81	847 aa	Known RBP	32.66	■■■□□ 2.82
LDLRAD4-218	ENST00000592991	DZIP1L	Q8IYY4	767 aa	Known RBP	32.66	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms