RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
SF3A2-207ENST00000592839 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
SF3A2-207ENST00000592839 ARXQ96QS3 562 aa20.12■□□□□ 0.81
SF3A2-207ENST00000592839 SYT17Q9BSW7 474 aa20.12■□□□□ 0.81
SF3A2-207ENST00000592839 AKAP4Q5JQC9 854 aa20.11■□□□□ 0.81
SF3A2-207ENST00000592839 COL23A1Q86Y22 540 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-207ENST00000592839 FHDC1Q9C0D6 1143 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-207ENST00000592839 SSFA2P28290 1259 aa20.1■□□□□ 0.81
SF3A2-207ENST00000592839 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
SF3A2-207ENST00000592839 ITPK1Q13572 414 aa20.09■□□□□ 0.81
SF3A2-207ENST00000592839 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
SF3A2-207ENST00000592839 TJP1Q07157 1748 aa20.09■□□□□ 0.81
SF3A2-207ENST00000592839 UBR2Q8IWV8 1755 aa20.08■□□□□ 0.81
SF3A2-207ENST00000592839 SLC4A9Q96Q91 983 aa20.08■□□□□ 0.81
SF3A2-207ENST00000592839 MYH14Q7Z406 1995 aaKnown RBP20.08■□□□□ 0.8
SF3A2-207ENST00000592839 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
SF3A2-207ENST00000592839 POLD1P28340 1107 aa20.07■□□□□ 0.8
SF3A2-207ENST00000592839 RC3H1Q5TC82 1133 aaKnown RBP20.07■□□□□ 0.8
SF3A2-207ENST00000592839 SIPA1L3O60292 1781 aaPredicted RBP20.07■□□□□ 0.8
SF3A2-207ENST00000592839 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
SF3A2-207ENST00000592839 AK7Q96M32 723 aa20.06■□□□□ 0.8
SF3A2-207ENST00000592839 ATP6V1AP38606 617 aa20.05■□□□□ 0.8
SF3A2-207ENST00000592839 CABP4P57796 275 aa20.05■□□□□ 0.8
SF3A2-207ENST00000592839 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
SF3A2-207ENST00000592839 KCPQ6ZWJ8 1503 aa20.04■□□□□ 0.8
SF3A2-207ENST00000592839 SLC52A2Q9HAB3 445 aa20.04■□□□□ 0.8
SF3A2-207ENST00000592839 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
SF3A2-207ENST00000592839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.03■□□□□ 0.8
SF3A2-207ENST00000592839 HMOX1P09601 288 aa20.03■□□□□ 0.8
SF3A2-207ENST00000592839 ADRA2BP18089 450 aa20.03■□□□□ 0.8
SF3A2-207ENST00000592839 PPP2R1AP30153 589 aa20.03■□□□□ 0.8
SF3A2-207ENST00000592839 MTHFSDQ2M296 383 aaKnown RBP20.03■□□□□ 0.8
SF3A2-207ENST00000592839 NFATC2IPQ8NCF5 419 aa20.02■□□□□ 0.8
SF3A2-207ENST00000592839 CHD4Q14839 1912 aa20.02■□□□□ 0.79
SF3A2-207ENST00000592839 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.79
SF3A2-207ENST00000592839 CEMIPQ8WUJ3 1361 aa20.01■□□□□ 0.79
SF3A2-207ENST00000592839 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
SF3A2-207ENST00000592839 GAS2L2Q8NHY3 880 aa20■□□□□ 0.79
SF3A2-207ENST00000592839 CFAP53Q96M91 514 aa20■□□□□ 0.79
SF3A2-207ENST00000592839 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
SF3A2-207ENST00000592839 GNPATO15228 680 aa19.98■□□□□ 0.79
SF3A2-207ENST00000592839 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
SF3A2-207ENST00000592839 CD2APQ9Y5K6 639 aa19.98■□□□□ 0.79
SF3A2-207ENST00000592839 RPS6KA4O75676 772 aa19.97■□□□□ 0.79
SF3A2-207ENST00000592839 GPR162Q16538 588 aa19.97■□□□□ 0.79
SF3A2-207ENST00000592839 VSIG10Q8N0Z9 540 aa19.97■□□□□ 0.79
SF3A2-207ENST00000592839 ZNF784Q8NCA9 323 aaPredicted RBP19.97■□□□□ 0.79
SF3A2-207ENST00000592839 FCHSD2O94868 740 aa19.96■□□□□ 0.79
SF3A2-207ENST00000592839 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
SF3A2-207ENST00000592839 RTCBQ9Y3I0 505 aaKnown RBP19.96■□□□□ 0.79
SF3A2-207ENST00000592839 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
SF3A2-207ENST00000592839 KIAA1551Q9HCM1 1747 aa19.94■□□□□ 0.78
SF3A2-207ENST00000592839 GNAT3A8MTJ3 354 aa19.94■□□□□ 0.78
SF3A2-207ENST00000592839 U2SURPO15042 1029 aaKnown RBP19.94■□□□□ 0.78
SF3A2-207ENST00000592839 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
SF3A2-207ENST00000592839 MSH5O43196 834 aa19.93■□□□□ 0.78
SF3A2-207ENST00000592839 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
SF3A2-207ENST00000592839 PRKAR2BP31323 418 aa19.92■□□□□ 0.78
SF3A2-207ENST00000592839 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
SF3A2-207ENST00000592839 TRAPPC3LQ5T215 181 aa19.92■□□□□ 0.78
SF3A2-207ENST00000592839 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
SF3A2-207ENST00000592839 PTCD1O75127 700 aaKnown RBP19.91■□□□□ 0.78
SF3A2-207ENST00000592839 PHF14O94880 888 aa19.91■□□□□ 0.78
SF3A2-207ENST00000592839 MSL1Q68DK7 614 aa19.91■□□□□ 0.78
SF3A2-207ENST00000592839 INTS5Q6P9B9 1019 aaKnown RBP19.91■□□□□ 0.78
SF3A2-207ENST00000592839 NLGN1Q8N2Q7 840 aa19.91■□□□□ 0.78
SF3A2-207ENST00000592839 NLGN2Q8NFZ4 835 aa19.91■□□□□ 0.78
SF3A2-207ENST00000592839 ARHGEF1Q92888 912 aaKnown RBP19.91■□□□□ 0.78
SF3A2-207ENST00000592839 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
SF3A2-207ENST00000592839 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
SF3A2-207ENST00000592839 CYP19A1P11511 503 aaPredicted RBP19.89■□□□□ 0.77
SF3A2-207ENST00000592839 GYS1P13807 737 aa19.89■□□□□ 0.77
SF3A2-207ENST00000592839 SMIM5Q71RC9 77 aa19.89■□□□□ 0.77
SF3A2-207ENST00000592839 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
SF3A2-207ENST00000592839 SOS1Q07889 1333 aaPredicted RBP19.88■□□□□ 0.77
SF3A2-207ENST00000592839 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
SF3A2-207ENST00000592839 RALBP1Q15311 655 aa19.88■□□□□ 0.77
SF3A2-207ENST00000592839 BRCA1P38398 1863 aaKnown RBP19.88■□□□□ 0.77
SF3A2-207ENST00000592839 NRXN2Q9P2S2 1712 aa19.88■□□□□ 0.77
SF3A2-207ENST00000592839 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
SF3A2-207ENST00000592839 DLG5Q8TDM6 1919 aa19.87■□□□□ 0.77
SF3A2-207ENST00000592839 ZNF790Q6PG37 636 aa19.87■□□□□ 0.77
SF3A2-207ENST00000592839 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
SF3A2-207ENST00000592839 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
SF3A2-207ENST00000592839 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
SF3A2-207ENST00000592839 SLC39A6Q13433 755 aa19.86■□□□□ 0.77
SF3A2-207ENST00000592839 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
SF3A2-207ENST00000592839 TEFQ10587 303 aa19.85■□□□□ 0.77
SF3A2-207ENST00000592839 MMP10P09238 476 aa19.84■□□□□ 0.77
SF3A2-207ENST00000592839 RFC4P35249 363 aa19.84■□□□□ 0.77
SF3A2-207ENST00000592839 PLEKHF1Q96S99 279 aa19.84■□□□□ 0.77
SF3A2-207ENST00000592839 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
SF3A2-207ENST00000592839 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
SF3A2-207ENST00000592839 GRIN3BO60391 1043 aa19.83■□□□□ 0.77
SF3A2-207ENST00000592839 CNGB1Q14028 1251 aaPredicted RBP19.83■□□□□ 0.77
SF3A2-207ENST00000592839 ZNF496Q96IT1 587 aaPredicted RBP19.83■□□□□ 0.77
SF3A2-207ENST00000592839 TEX13AQ9BXU3 409 aaPredicted RBP19.83■□□□□ 0.77
SF3A2-207ENST00000592839 COL15A1P39059 1388 aa19.83■□□□□ 0.76
SF3A2-207ENST00000592839 YBX3P16989 372 aaKnown RBP eCLIP19.82■□□□□ 0.761e-9■■□□□ 13.4
SF3A2-207ENST00000592839 TTC5Q8N0Z6 440 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 222.7 ms