RNA–Protein interactions for RNA: ENST00000592628.5

TCF3-217, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-217ENST00000592628 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
TCF3-217ENST00000592628 SMC4Q9NTJ3 1288 aa20.16■□□□□ 0.82
TCF3-217ENST00000592628 NKX1-1Q15270 411 aaPredicted RBP20.15■□□□□ 0.82
TCF3-217ENST00000592628 C20orf194Q5TEA3 1177 aa20.15■□□□□ 0.82
TCF3-217ENST00000592628 FRAT1Q92837 279 aaPredicted RBP20.14■□□□□ 0.81
TCF3-217ENST00000592628 KCNQ3O43525 872 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 VPS72Q15906 364 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 USP21Q9UK80 565 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 EXOC5O00471 708 aa20.13■□□□□ 0.81
TCF3-217ENST00000592628 CDCA7Q9BWT1 371 aaPredicted RBP20.13■□□□□ 0.81
TCF3-217ENST00000592628 MRC1P22897 1456 aa20.12■□□□□ 0.81
TCF3-217ENST00000592628 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
TCF3-217ENST00000592628 TCERG1O14776 1098 aaKnown RBP20.11■□□□□ 0.81
TCF3-217ENST00000592628 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
TCF3-217ENST00000592628 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
TCF3-217ENST00000592628 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
TCF3-217ENST00000592628 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
TCF3-217ENST00000592628 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
TCF3-217ENST00000592628 CABP4P57796 275 aa20.1■□□□□ 0.81
TCF3-217ENST00000592628 EXOC6Q8TAG9 804 aa20.09■□□□□ 0.81
TCF3-217ENST00000592628 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
TCF3-217ENST00000592628 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
TCF3-217ENST00000592628 AFF2P51816 1311 aa20.09■□□□□ 0.81
TCF3-217ENST00000592628 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
TCF3-217ENST00000592628 CRBNQ96SW2 442 aa20.08■□□□□ 0.81
TCF3-217ENST00000592628 SLC39A6Q13433 755 aa20.08■□□□□ 0.8
TCF3-217ENST00000592628 DDB1Q16531 1140 aa20.08■□□□□ 0.8
TCF3-217ENST00000592628 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.8
TCF3-217ENST00000592628 TNNQ9UQP3 1299 aa20.08■□□□□ 0.8
TCF3-217ENST00000592628 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
TCF3-217ENST00000592628 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
TCF3-217ENST00000592628 FAM98CQ17RN3 349 aaKnown RBP20.07■□□□□ 0.8
TCF3-217ENST00000592628 ZNF790Q6PG37 636 aa20.07■□□□□ 0.8
TCF3-217ENST00000592628 SOS1Q07889 1333 aaPredicted RBP20.07■□□□□ 0.8
TCF3-217ENST00000592628 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
TCF3-217ENST00000592628 HEG1Q9ULI3 1381 aa20.05■□□□□ 0.8
TCF3-217ENST00000592628 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
TCF3-217ENST00000592628 KAT6BQ8WYB5 2073 aa20.05■□□□□ 0.8
TCF3-217ENST00000592628 ATF7IPQ6VMQ6 1270 aa20.04■□□□□ 0.8
TCF3-217ENST00000592628 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
TCF3-217ENST00000592628 IPO8O15397 1037 aaKnown RBP20.03■□□□□ 0.8
TCF3-217ENST00000592628 RLBP1P12271 317 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 TRIM27P14373 513 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 ITGB4P16144 1822 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 HOXB7P09629 217 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
TCF3-217ENST00000592628 GIGYF1O75420 1035 aaPredicted RBP20.02■□□□□ 0.8
TCF3-217ENST00000592628 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
TCF3-217ENST00000592628 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
TCF3-217ENST00000592628 CACNA1FO60840 1977 aa20.02■□□□□ 0.8
TCF3-217ENST00000592628 ATRNO75882 1429 aa20.01■□□□□ 0.79
TCF3-217ENST00000592628 DZIP1LQ8IYY4 767 aaKnown RBP20.01■□□□□ 0.79
TCF3-217ENST00000592628 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
TCF3-217ENST00000592628 MARCH10Q8NA82 808 aaPredicted RBP20.01■□□□□ 0.79
TCF3-217ENST00000592628 ARHGAP45Q92619 1136 aa20.01■□□□□ 0.79
TCF3-217ENST00000592628 GLI3P10071 1580 aa20.01■□□□□ 0.79
TCF3-217ENST00000592628 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
TCF3-217ENST00000592628 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
TCF3-217ENST00000592628 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
TCF3-217ENST00000592628 TRPC5Q9UL62 973 aaPredicted RBP20■□□□□ 0.79
TCF3-217ENST00000592628 COG6Q9Y2V7 657 aa20■□□□□ 0.79
TCF3-217ENST00000592628 PRAMEF22A3QJZ6 481 aa20■□□□□ 0.79
TCF3-217ENST00000592628 MS4A1P11836 297 aa20■□□□□ 0.79
TCF3-217ENST00000592628 TMOD3Q9NYL9 352 aa20■□□□□ 0.79
TCF3-217ENST00000592628 PAPPAQ13219 1627 aa19.99■□□□□ 0.79
TCF3-217ENST00000592628 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
TCF3-217ENST00000592628 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
TCF3-217ENST00000592628 PIGBQ92521 554 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 C5P01031 1676 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 THSD7AQ9UPZ6 1657 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 DOT1LQ8TEK3 1739 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 UBR2Q8IWV8 1755 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 G2E3Q7L622 706 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 FBXO41Q8TF61 875 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 FMNL2Q96PY5 1086 aa19.98■□□□□ 0.79
TCF3-217ENST00000592628 A0A0G2JS52 829 aa19.97■□□□□ 0.79
TCF3-217ENST00000592628 MYT1Q01538 1121 aa19.97■□□□□ 0.79
TCF3-217ENST00000592628 QTRT2Q9H974 415 aaKnown RBP19.97■□□□□ 0.79
TCF3-217ENST00000592628 B4GALNT3Q6L9W6 998 aa19.96■□□□□ 0.79
TCF3-217ENST00000592628 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
TCF3-217ENST00000592628 PRIM1P49642 420 aaKnown RBP19.95■□□□□ 0.78
TCF3-217ENST00000592628 TMEM57Q8N5G2 664 aa19.95■□□□□ 0.78
TCF3-217ENST00000592628 API5Q9BZZ5 524 aaKnown RBP19.95■□□□□ 0.78
TCF3-217ENST00000592628 BCL9O00512 1426 aa19.95■□□□□ 0.78
TCF3-217ENST00000592628 PTPRCP08575 1304 aa19.95■□□□□ 0.78
TCF3-217ENST00000592628 SNRPA1P09661 255 aaKnown RBP19.95■□□□□ 0.78
TCF3-217ENST00000592628 MVPQ14764 893 aaKnown RBP19.95■□□□□ 0.78
TCF3-217ENST00000592628 SYTL4Q96C24 671 aaPredicted RBP19.95■□□□□ 0.78
TCF3-217ENST00000592628 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
TCF3-217ENST00000592628 KCPQ6ZWJ8 1503 aa19.94■□□□□ 0.78
TCF3-217ENST00000592628 ONECUT3O60422 494 aaPredicted RBP19.94■□□□□ 0.78
TCF3-217ENST00000592628 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
TCF3-217ENST00000592628 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
TCF3-217ENST00000592628 ATG3Q9NT62 314 aa19.93■□□□□ 0.78
TCF3-217ENST00000592628 USP16Q9Y5T5 823 aa19.93■□□□□ 0.78
TCF3-217ENST00000592628 RGS12O14924 1447 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms