RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
VMP1-215ENST00000592619 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
VMP1-215ENST00000592619 E9PSI1 815 aa10.57□□□□□ -0.72
VMP1-215ENST00000592619 SF3B2Q13435 895 aaKnown RBP10.57□□□□□ -0.72
VMP1-215ENST00000592619 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
VMP1-215ENST00000592619 SEPT3Q9UH03 358 aa10.57□□□□□ -0.72
VMP1-215ENST00000592619 C21orf2O43822 256 aa10.56□□□□□ -0.72
VMP1-215ENST00000592619 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
VMP1-215ENST00000592619 ESCO1Q5FWF5 840 aa10.56□□□□□ -0.72
VMP1-215ENST00000592619 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
VMP1-215ENST00000592619 PURBQ96QR8 312 aaKnown RBP10.56□□□□□ -0.72
VMP1-215ENST00000592619 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 H3BRB1 525 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 SLC19A1P41440 591 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 ZNF211Q13398 564 aaPredicted RBP10.55□□□□□ -0.72
VMP1-215ENST00000592619 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
VMP1-215ENST00000592619 GLYCTKQ8IVS8 523 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
VMP1-215ENST00000592619 PGPEP1Q9NXJ5 209 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
VMP1-215ENST00000592619 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
VMP1-215ENST00000592619 ADD1P35611 737 aaKnown RBP10.54□□□□□ -0.72
VMP1-215ENST00000592619 ECM1Q16610 540 aa10.54□□□□□ -0.72
VMP1-215ENST00000592619 CAPN12Q6ZSI9 719 aa10.54□□□□□ -0.72
VMP1-215ENST00000592619 SCG3Q8WXD2 468 aaKnown RBP10.54□□□□□ -0.72
VMP1-215ENST00000592619 MKNK1Q9BUB5 465 aa10.54□□□□□ -0.72
VMP1-215ENST00000592619 DNMT3AQ9Y6K1 912 aaPredicted RBP10.54□□□□□ -0.72
VMP1-215ENST00000592619 NR3C2P08235 984 aa10.53□□□□□ -0.72
VMP1-215ENST00000592619 FOXK2Q01167 660 aa10.53□□□□□ -0.72
VMP1-215ENST00000592619 MTFR1Q15390 333 aa10.53□□□□□ -0.72
VMP1-215ENST00000592619 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
VMP1-215ENST00000592619 SERTAD1Q9UHV2 236 aa10.53□□□□□ -0.72
VMP1-215ENST00000592619 GFRA3O60609 400 aa10.52□□□□□ -0.73
VMP1-215ENST00000592619 SPRYD7Q5W111 196 aa10.52□□□□□ -0.73
VMP1-215ENST00000592619 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
VMP1-215ENST00000592619 TSPAN10Q9H1Z9 355 aaPredicted RBP10.52□□□□□ -0.73
VMP1-215ENST00000592619 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
VMP1-215ENST00000592619 SCHIP1Q9P0W5 487 aaPredicted RBP10.52□□□□□ -0.73
VMP1-215ENST00000592619 A6NJY4 79 aa10.51□□□□□ -0.73
VMP1-215ENST00000592619 NPR3P17342 541 aa10.51□□□□□ -0.73
VMP1-215ENST00000592619 SMTNP53814 917 aa10.51□□□□□ -0.73
VMP1-215ENST00000592619 XAGE2Q96GT9 111 aa10.51□□□□□ -0.73
VMP1-215ENST00000592619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
VMP1-215ENST00000592619 ANKRD33BA6NCL7 494 aa10.49□□□□□ -0.73
VMP1-215ENST00000592619 ARHGAP4P98171 946 aa10.49□□□□□ -0.73
VMP1-215ENST00000592619 VTI1AQ96AJ9 217 aa10.49□□□□□ -0.73
VMP1-215ENST00000592619 DCTN4Q9UJW0 460 aa10.49□□□□□ -0.73
VMP1-215ENST00000592619 A0A1W2PRU2 124 aa10.48□□□□□ -0.73
VMP1-215ENST00000592619 CDK2AP1O14519 115 aa10.48□□□□□ -0.73
VMP1-215ENST00000592619 PPP1R12BO60237 982 aaPredicted RBP10.48□□□□□ -0.73
VMP1-215ENST00000592619 NAA30Q147X3 362 aaPredicted RBP10.48□□□□□ -0.73
VMP1-215ENST00000592619 NPAS4Q8IUM7 802 aa10.48□□□□□ -0.73
VMP1-215ENST00000592619 C2orf49Q9BVC5 232 aaPredicted RBP10.48□□□□□ -0.73
VMP1-215ENST00000592619 HRH3Q9Y5N1 445 aa10.48□□□□□ -0.73
VMP1-215ENST00000592619 FAM13AO94988 1023 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 IL2RAP01589 272 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 ADH1AP07327 375 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 PSMA6P60900 246 aaKnown RBP10.47□□□□□ -0.73
VMP1-215ENST00000592619 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 POTEAQ6S8J7 498 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
VMP1-215ENST00000592619 SLC9A9Q8IVB4 645 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 ARHGEF10LQ9HCE6 1279 aa10.47□□□□□ -0.73
VMP1-215ENST00000592619 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
VMP1-215ENST00000592619 NNTQ13423 1086 aa10.46□□□□□ -0.73
VMP1-215ENST00000592619 C16orf46Q6P387 395 aa10.46□□□□□ -0.73
VMP1-215ENST00000592619 CHMP7Q8WUX9 453 aaPredicted RBP10.46□□□□□ -0.73
VMP1-215ENST00000592619 ASB16Q96NS5 453 aa10.46□□□□□ -0.73
VMP1-215ENST00000592619 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 CLN3Q13286 438 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 Q6ZVU0 165 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 ZSCAN29Q8IWY8 852 aaPredicted RBP10.45□□□□□ -0.74
VMP1-215ENST00000592619 KDF1Q8NAX2 398 aaPredicted RBP10.45□□□□□ -0.74
VMP1-215ENST00000592619 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
VMP1-215ENST00000592619 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
VMP1-215ENST00000592619 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
VMP1-215ENST00000592619 MAPK1P28482 360 aa10.44□□□□□ -0.74
VMP1-215ENST00000592619 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
VMP1-215ENST00000592619 SNIP1Q8TAD8 396 aaKnown RBP10.44□□□□□ -0.74
VMP1-215ENST00000592619 KLF16Q9BXK1 252 aaPredicted RBP10.44□□□□□ -0.74
VMP1-215ENST00000592619 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
VMP1-215ENST00000592619 WASF2Q9Y6W5 498 aa10.44□□□□□ -0.74
VMP1-215ENST00000592619 COL19A1Q14993 1142 aa10.43□□□□□ -0.74
VMP1-215ENST00000592619 TLR1Q15399 786 aa10.43□□□□□ -0.74
VMP1-215ENST00000592619 NBPF15Q8N660 670 aa10.43□□□□□ -0.74
VMP1-215ENST00000592619 SAP130Q9H0E3 1048 aa10.43□□□□□ -0.74
VMP1-215ENST00000592619 HIRAP54198 1017 aaPredicted RBP10.42□□□□□ -0.74
VMP1-215ENST00000592619 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
VMP1-215ENST00000592619 MYO19Q96H55 970 aa10.42□□□□□ -0.74
VMP1-215ENST00000592619 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
VMP1-215ENST00000592619 PTGIRP43119 386 aa10.41□□□□□ -0.74
VMP1-215ENST00000592619 TEAD4Q15561 434 aa10.41□□□□□ -0.74
VMP1-215ENST00000592619 COX20Q5RI15 118 aa10.41□□□□□ -0.74
VMP1-215ENST00000592619 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
VMP1-215ENST00000592619 RBCK1Q9BYM8 510 aa10.41□□□□□ -0.74
VMP1-215ENST00000592619 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms