RNA–Protein interactions for RNA: ENST00000592597.1

POLR2E-210, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-210ENST00000592597 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
POLR2E-210ENST00000592597 ARFGEF1Q9Y6D6 1849 aa21.55■■□□□ 1.04
POLR2E-210ENST00000592597 HSPA1AP0DMV8 641 aaKnown RBP21.55■■□□□ 1.04
POLR2E-210ENST00000592597 HSPA1BP0DMV9 641 aaKnown RBP21.55■■□□□ 1.04
POLR2E-210ENST00000592597 SBF1O95248 1867 aa21.54■■□□□ 1.04
POLR2E-210ENST00000592597 ATP6V1AP38606 617 aa21.54■■□□□ 1.04
POLR2E-210ENST00000592597 HSP90AB2PQ58FF8 381 aa21.54■■□□□ 1.04
POLR2E-210ENST00000592597 ASAP1Q9ULH1 1129 aa21.54■■□□□ 1.04
POLR2E-210ENST00000592597 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
POLR2E-210ENST00000592597 KCNA3P22001 575 aa21.52■■□□□ 1.04
POLR2E-210ENST00000592597 CARD11Q9BXL7 1154 aa21.52■■□□□ 1.04
POLR2E-210ENST00000592597 RNF181Q9P0P0 153 aa21.52■■□□□ 1.04
POLR2E-210ENST00000592597 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.03
POLR2E-210ENST00000592597 RTL1A6NKG5 1358 aa21.51■■□□□ 1.03
POLR2E-210ENST00000592597 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
POLR2E-210ENST00000592597 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
POLR2E-210ENST00000592597 C4AP0C0L4 1744 aa21.5■■□□□ 1.03
POLR2E-210ENST00000592597 TMF1P82094 1093 aa21.5■■□□□ 1.03
POLR2E-210ENST00000592597 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
POLR2E-210ENST00000592597 PLEKHG2Q9H7P9 1386 aa21.49■■□□□ 1.03
POLR2E-210ENST00000592597 TRAPPC3LQ5T215 181 aa21.49■■□□□ 1.03
POLR2E-210ENST00000592597 NLGN1Q8N2Q7 840 aa21.49■■□□□ 1.03
POLR2E-210ENST00000592597 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
POLR2E-210ENST00000592597 SMC1BQ8NDV3 1235 aa21.48■■□□□ 1.03
POLR2E-210ENST00000592597 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
POLR2E-210ENST00000592597 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
POLR2E-210ENST00000592597 PIM2Q9P1W9 311 aa21.46■■□□□ 1.03
POLR2E-210ENST00000592597 RTCBQ9Y3I0 505 aaKnown RBP21.46■■□□□ 1.03
POLR2E-210ENST00000592597 PARP3Q9Y6F1 533 aa21.46■■□□□ 1.03
POLR2E-210ENST00000592597 FYB1O15117 783 aa21.45■■□□□ 1.02
POLR2E-210ENST00000592597 GYS1P13807 737 aa21.45■■□□□ 1.02
POLR2E-210ENST00000592597 NKX1-1Q15270 411 aaPredicted RBP21.45■■□□□ 1.02
POLR2E-210ENST00000592597 ATG3Q9NT62 314 aa21.45■■□□□ 1.02
POLR2E-210ENST00000592597 INSRP06213 1382 aa21.45■■□□□ 1.02
POLR2E-210ENST00000592597 DALRD3Q5D0E6 543 aaKnown RBP21.44■■□□□ 1.02
POLR2E-210ENST00000592597 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
POLR2E-210ENST00000592597 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
POLR2E-210ENST00000592597 MYH14Q7Z406 1995 aaKnown RBP21.43■■□□□ 1.02
POLR2E-210ENST00000592597 CHRNA5P30532 468 aa21.43■■□□□ 1.02
POLR2E-210ENST00000592597 SLC4A9Q96Q91 983 aa21.43■■□□□ 1.02
POLR2E-210ENST00000592597 RFC4P35249 363 aa21.41■■□□□ 1.02
POLR2E-210ENST00000592597 PUS7Q96PZ0 661 aaKnown RBP21.41■■□□□ 1.02
POLR2E-210ENST00000592597 RBM42Q9BTD8 480 aaKnown RBP21.41■■□□□ 1.02
POLR2E-210ENST00000592597 SPG7Q9UQ90 795 aa21.41■■□□□ 1.02
POLR2E-210ENST00000592597 RASSF7Q02833 373 aa21.4■■□□□ 1.02
POLR2E-210ENST00000592597 FLT4P35916 1363 aa21.39■■□□□ 1.02
POLR2E-210ENST00000592597 EMILIN1Q9Y6C2 1016 aa21.39■■□□□ 1.01
POLR2E-210ENST00000592597 COL5A3P25940 1745 aaPredicted RBP21.38■■□□□ 1.01
POLR2E-210ENST00000592597 SLC34A2O95436 690 aa21.38■■□□□ 1.01
POLR2E-210ENST00000592597 SRP68Q9UHB9 627 aaKnown RBP21.37■■□□□ 1.01
POLR2E-210ENST00000592597 KDRP35968 1356 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 KIF20BQ96Q89 1820 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
POLR2E-210ENST00000592597 RPS6KA4O75676 772 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 PHKG2P15735 406 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 DDR1Q08345 913 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 TESK2Q96S53 571 aa21.36■■□□□ 1.01
POLR2E-210ENST00000592597 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
POLR2E-210ENST00000592597 FKBP8Q14318 412 aa21.35■■□□□ 1.01
POLR2E-210ENST00000592597 ST20-MTHFSA0A0A6YYL1 179 aa21.34■■□□□ 1.01
POLR2E-210ENST00000592597 ADRA2BP18089 450 aa21.34■■□□□ 1.01
POLR2E-210ENST00000592597 RC3H1Q5TC82 1133 aaKnown RBP21.34■■□□□ 1.01
POLR2E-210ENST00000592597 IFNL2Q8IZJ0 200 aa21.34■■□□□ 1.01
POLR2E-210ENST00000592597 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
POLR2E-210ENST00000592597 GLTPD2A6NH11 291 aa21.32■■□□□ 1
POLR2E-210ENST00000592597 EYA1Q99502 592 aa21.32■■□□□ 1
POLR2E-210ENST00000592597 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
POLR2E-210ENST00000592597 TIAM2Q8IVF5 1701 aa21.31■■□□□ 1
POLR2E-210ENST00000592597 NCAPD2Q15021 1401 aa21.3■■□□□ 1
POLR2E-210ENST00000592597 FOXN1O15353 648 aa21.3■■□□□ 1
POLR2E-210ENST00000592597 ZNF831Q5JPB2 1677 aa21.29■■□□□ 1
POLR2E-210ENST00000592597 POTECB2RU33 542 aa21.29■■□□□ 1
POLR2E-210ENST00000592597 KIF24Q5T7B8 1368 aa21.28■■□□□ 1
POLR2E-210ENST00000592597 LMNB1P20700 586 aa21.28■■□□□ 1
POLR2E-210ENST00000592597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.28■■□□□ 1
POLR2E-210ENST00000592597 AFDNP55196 1824 aaKnown RBP21.27■■□□□ 1
POLR2E-210ENST00000592597 TONSLQ96HA7 1378 aa21.27■■□□□ 1
POLR2E-210ENST00000592597 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
POLR2E-210ENST00000592597 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
POLR2E-210ENST00000592597 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
POLR2E-210ENST00000592597 USP42Q9H9J4 1324 aaKnown RBP21.26■□□□□ 0.99
POLR2E-210ENST00000592597 CRKLP46109 303 aaKnown RBP21.25■□□□□ 0.99
POLR2E-210ENST00000592597 ZC3H4Q9UPT8 1303 aaKnown RBP21.25■□□□□ 0.99
POLR2E-210ENST00000592597 TM4SF1P30408 202 aa21.23■□□□□ 0.99
POLR2E-210ENST00000592597 ERVV-2B6SEH9 535 aa21.22■□□□□ 0.99
POLR2E-210ENST00000592597 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
POLR2E-210ENST00000592597 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
POLR2E-210ENST00000592597 FAM161AQ3B820 660 aa21.22■□□□□ 0.99
POLR2E-210ENST00000592597 CREBZFQ9NS37 354 aa21.22■□□□□ 0.99
POLR2E-210ENST00000592597 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
POLR2E-210ENST00000592597 CABP4P57796 275 aa21.21■□□□□ 0.99
POLR2E-210ENST00000592597 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
POLR2E-210ENST00000592597 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
POLR2E-210ENST00000592597 NFKBIEO00221 500 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 USPL1Q5W0Q7 1092 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 PRDM10Q9NQV6 1147 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 ADAMTS7Q9UKP4 1686 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
POLR2E-210ENST00000592597 TJP1Q07157 1748 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms