RNA–Protein interactions for RNA: ENST00000592166.5

CNTD1-207, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 5

Gene CNTD1, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-207ENST00000592166 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
CNTD1-207ENST00000592166 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
CNTD1-207ENST00000592166 VAMP4O75379 141 aa18.66■□□□□ 0.58
CNTD1-207ENST00000592166 DDB1Q16531 1140 aa18.66■□□□□ 0.58
CNTD1-207ENST00000592166 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
CNTD1-207ENST00000592166 VIRMAQ69YN4 1812 aaKnown RBP18.65■□□□□ 0.58
CNTD1-207ENST00000592166 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
CNTD1-207ENST00000592166 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
CNTD1-207ENST00000592166 TNS2Q63HR2 1409 aa18.65■□□□□ 0.58
CNTD1-207ENST00000592166 HOXB7P09629 217 aa18.64■□□□□ 0.57
CNTD1-207ENST00000592166 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
CNTD1-207ENST00000592166 C8orf58Q8NAV2 365 aa18.64■□□□□ 0.57
CNTD1-207ENST00000592166 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
CNTD1-207ENST00000592166 TRPC5Q9UL62 973 aaPredicted RBP18.64■□□□□ 0.57
CNTD1-207ENST00000592166 AFF2P51816 1311 aa18.64■□□□□ 0.57
CNTD1-207ENST00000592166 MRC1P22897 1456 aa18.64■□□□□ 0.57
CNTD1-207ENST00000592166 BCAR3O75815 825 aa18.62■□□□□ 0.57
CNTD1-207ENST00000592166 PDE3AQ14432 1141 aa18.62■□□□□ 0.57
CNTD1-207ENST00000592166 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
CNTD1-207ENST00000592166 SIPA1L3O60292 1781 aaPredicted RBP18.61■□□□□ 0.57
CNTD1-207ENST00000592166 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 ELL2O00472 640 aaPredicted RBP18.61■□□□□ 0.57
CNTD1-207ENST00000592166 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
CNTD1-207ENST00000592166 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
CNTD1-207ENST00000592166 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
CNTD1-207ENST00000592166 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
CNTD1-207ENST00000592166 ZNF790Q6PG37 636 aa18.59■□□□□ 0.57
CNTD1-207ENST00000592166 FRAT1Q92837 279 aaPredicted RBP18.59■□□□□ 0.57
CNTD1-207ENST00000592166 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
CNTD1-207ENST00000592166 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
CNTD1-207ENST00000592166 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
CNTD1-207ENST00000592166 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.56
CNTD1-207ENST00000592166 ATRNO75882 1429 aa18.57■□□□□ 0.56
CNTD1-207ENST00000592166 A0A0G2JS52 829 aa18.57■□□□□ 0.56
CNTD1-207ENST00000592166 MYT1Q01538 1121 aa18.57■□□□□ 0.56
CNTD1-207ENST00000592166 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
CNTD1-207ENST00000592166 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
CNTD1-207ENST00000592166 PLIN1O60240 522 aa18.56■□□□□ 0.56
CNTD1-207ENST00000592166 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
CNTD1-207ENST00000592166 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
CNTD1-207ENST00000592166 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
CNTD1-207ENST00000592166 AAMPQ13685 434 aa18.55■□□□□ 0.56
CNTD1-207ENST00000592166 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
CNTD1-207ENST00000592166 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
CNTD1-207ENST00000592166 QTRT2Q9H974 415 aaKnown RBP18.55■□□□□ 0.56
CNTD1-207ENST00000592166 KRT24Q2M2I5 525 aa18.54■□□□□ 0.56
CNTD1-207ENST00000592166 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
CNTD1-207ENST00000592166 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
CNTD1-207ENST00000592166 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
CNTD1-207ENST00000592166 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
CNTD1-207ENST00000592166 HEG1Q9ULI3 1381 aa18.54■□□□□ 0.56
CNTD1-207ENST00000592166 PTPRCP08575 1304 aa18.53■□□□□ 0.56
CNTD1-207ENST00000592166 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
CNTD1-207ENST00000592166 SNRPA1P09661 255 aaKnown RBP18.53■□□□□ 0.56
CNTD1-207ENST00000592166 DZIP1LQ8IYY4 767 aaKnown RBP18.53■□□□□ 0.56
CNTD1-207ENST00000592166 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
CNTD1-207ENST00000592166 CACNA1FO60840 1977 aa18.53■□□□□ 0.56
CNTD1-207ENST00000592166 KCNQ3O43525 872 aa18.52■□□□□ 0.56
CNTD1-207ENST00000592166 ONECUT3O60422 494 aaPredicted RBP18.52■□□□□ 0.56
CNTD1-207ENST00000592166 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
CNTD1-207ENST00000592166 SLC39A6Q13433 755 aa18.51■□□□□ 0.55
CNTD1-207ENST00000592166 MARCH10Q8NA82 808 aaPredicted RBP18.51■□□□□ 0.55
CNTD1-207ENST00000592166 TEX13AQ9BXU3 409 aaPredicted RBP18.51■□□□□ 0.55
CNTD1-207ENST00000592166 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
CNTD1-207ENST00000592166 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
CNTD1-207ENST00000592166 GLI3P10071 1580 aa18.5■□□□□ 0.55
CNTD1-207ENST00000592166 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
CNTD1-207ENST00000592166 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
CNTD1-207ENST00000592166 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
CNTD1-207ENST00000592166 BCL9O00512 1426 aa18.49■□□□□ 0.55
CNTD1-207ENST00000592166 TRIM27P14373 513 aa18.48■□□□□ 0.55
CNTD1-207ENST00000592166 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
CNTD1-207ENST00000592166 PIGBQ92521 554 aa18.48■□□□□ 0.55
CNTD1-207ENST00000592166 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
CNTD1-207ENST00000592166 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
CNTD1-207ENST00000592166 ITGB4P16144 1822 aa18.47■□□□□ 0.55
CNTD1-207ENST00000592166 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
CNTD1-207ENST00000592166 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
CNTD1-207ENST00000592166 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
CNTD1-207ENST00000592166 EXOC6Q8TAG9 804 aa18.47■□□□□ 0.55
CNTD1-207ENST00000592166 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
CNTD1-207ENST00000592166 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
CNTD1-207ENST00000592166 PAPPAQ13219 1627 aa18.47■□□□□ 0.55
CNTD1-207ENST00000592166 ERBB4Q15303 1308 aa18.47■□□□□ 0.55
CNTD1-207ENST00000592166 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
CNTD1-207ENST00000592166 SEPT12Q8IYM1 358 aa18.46■□□□□ 0.55
CNTD1-207ENST00000592166 PANK1Q8TE04 598 aa18.46■□□□□ 0.55
CNTD1-207ENST00000592166 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
CNTD1-207ENST00000592166 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
CNTD1-207ENST00000592166 ILDR2Q71H61 639 aa18.45■□□□□ 0.54
CNTD1-207ENST00000592166 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
CNTD1-207ENST00000592166 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
CNTD1-207ENST00000592166 UBR2Q8IWV8 1755 aa18.45■□□□□ 0.54
CNTD1-207ENST00000592166 FLIIQ13045 1269 aa18.44■□□□□ 0.54
CNTD1-207ENST00000592166 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
CNTD1-207ENST00000592166 DDX21Q9NR30 783 aaKnown RBP eCLIP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms