RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 ABT1Q9ULW3 272 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-218ENST00000592158 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
SMARCA4-218ENST00000592158 COL6A3P12111 3177 aa13.34□□□□□ -0.27
SMARCA4-218ENST00000592158 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
SMARCA4-218ENST00000592158 CAPNS2Q96L46 248 aa13.34□□□□□ -0.27
SMARCA4-218ENST00000592158 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-218ENST00000592158 SSFA2P28290 1259 aa13.33□□□□□ -0.28
SMARCA4-218ENST00000592158 GRM1Q13255 1194 aa13.33□□□□□ -0.28
SMARCA4-218ENST00000592158 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-218ENST00000592158 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
SMARCA4-218ENST00000592158 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
SMARCA4-218ENST00000592158 CA12O43570 354 aa13.32□□□□□ -0.28
SMARCA4-218ENST00000592158 ECE1P42892 770 aa13.32□□□□□ -0.28
SMARCA4-218ENST00000592158 SOX12O15370 315 aa13.3□□□□□ -0.28
SMARCA4-218ENST00000592158 CYP4F22Q6NT55 531 aa13.3□□□□□ -0.28
SMARCA4-218ENST00000592158 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-218ENST00000592158 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
SMARCA4-218ENST00000592158 C4AP0C0L4 1744 aa13.28□□□□□ -0.28
SMARCA4-218ENST00000592158 AOC2O75106 756 aa13.27□□□□□ -0.29
SMARCA4-218ENST00000592158 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.29
SMARCA4-218ENST00000592158 CHRNA5P30532 468 aa13.26□□□□□ -0.29
SMARCA4-218ENST00000592158 MAP2K2P36507 400 aa13.26□□□□□ -0.29
SMARCA4-218ENST00000592158 MKI67P46013 3256 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-218ENST00000592158 NLGN1Q8N2Q7 840 aa13.26□□□□□ -0.29
SMARCA4-218ENST00000592158 PALLDQ8WX93 1383 aa13.26□□□□□ -0.29
SMARCA4-218ENST00000592158 MEGF6O75095 1541 aa13.25□□□□□ -0.29
SMARCA4-218ENST00000592158 TMF1P82094 1093 aa13.25□□□□□ -0.29
SMARCA4-218ENST00000592158 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
SMARCA4-218ENST00000592158 TRIOBPQ9H2D6 2365 aa13.25□□□□□ -0.29
SMARCA4-218ENST00000592158 DDNO94850 711 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-218ENST00000592158 APLP2Q06481 763 aa13.24□□□□□ -0.29
SMARCA4-218ENST00000592158 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
SMARCA4-218ENST00000592158 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
SMARCA4-218ENST00000592158 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
SMARCA4-218ENST00000592158 EAPPQ56P03 285 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-218ENST00000592158 TAF1DQ9H5J8 278 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-218ENST00000592158 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-218ENST00000592158 GNPATO15228 680 aa13.22□□□□□ -0.29
SMARCA4-218ENST00000592158 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
SMARCA4-218ENST00000592158 SCN4AP35499 1836 aa13.21□□□□□ -0.29
SMARCA4-218ENST00000592158 ITGAEP38570 1179 aa13.21□□□□□ -0.29
SMARCA4-218ENST00000592158 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
SMARCA4-218ENST00000592158 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-218ENST00000592158 NFKBIEO00221 500 aa13.2□□□□□ -0.3
SMARCA4-218ENST00000592158 MAP1SQ66K74 1059 aaPredicted RBP13.2□□□□□ -0.3
SMARCA4-218ENST00000592158 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
SMARCA4-218ENST00000592158 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-218ENST00000592158 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
SMARCA4-218ENST00000592158 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
SMARCA4-218ENST00000592158 NFAT5O94916 1531 aa13.18□□□□□ -0.3
SMARCA4-218ENST00000592158 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-218ENST00000592158 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCA4-218ENST00000592158 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
SMARCA4-218ENST00000592158 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
SMARCA4-218ENST00000592158 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
SMARCA4-218ENST00000592158 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-218ENST00000592158 GYS1P13807 737 aa13.15□□□□□ -0.3
SMARCA4-218ENST00000592158 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
SMARCA4-218ENST00000592158 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
SMARCA4-218ENST00000592158 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-218ENST00000592158 COL25A1Q9BXS0 654 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-218ENST00000592158 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.312e-8■■■■□ 21.6
SMARCA4-218ENST00000592158 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-218ENST00000592158 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-218ENST00000592158 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
SMARCA4-218ENST00000592158 TRPM7Q96QT4 1865 aa13.13□□□□□ -0.31
SMARCA4-218ENST00000592158 UNC80Q8N2C7 3258 aa13.13□□□□□ -0.31
SMARCA4-218ENST00000592158 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-218ENST00000592158 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
SMARCA4-218ENST00000592158 EPHX2P34913 555 aa13.11□□□□□ -0.31
SMARCA4-218ENST00000592158 SIK1P57059 783 aa13.11□□□□□ -0.31
SMARCA4-218ENST00000592158 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-218ENST00000592158 RTCBQ9Y3I0 505 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-218ENST00000592158 CEP290O15078 2479 aa13.1□□□□□ -0.31
SMARCA4-218ENST00000592158 ITPK1Q13572 414 aa13.1□□□□□ -0.31
SMARCA4-218ENST00000592158 CST9Q5W186 159 aa13.1□□□□□ -0.31
SMARCA4-218ENST00000592158 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
SMARCA4-218ENST00000592158 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
SMARCA4-218ENST00000592158 LTN1O94822 1766 aa13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 DDR1Q08345 913 aa13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 ITGB4P16144 1822 aa13.09□□□□□ -0.31
SMARCA4-218ENST00000592158 RFC4P35249 363 aa13.08□□□□□ -0.32
SMARCA4-218ENST00000592158 PRDM6Q9NQX0 595 aa13.08□□□□□ -0.32
SMARCA4-218ENST00000592158 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.32
SMARCA4-218ENST00000592158 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
SMARCA4-218ENST00000592158 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
SMARCA4-218ENST00000592158 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
SMARCA4-218ENST00000592158 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
SMARCA4-218ENST00000592158 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-218ENST00000592158 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
SMARCA4-218ENST00000592158 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
SMARCA4-218ENST00000592158 ADRA2BP18089 450 aa13.05□□□□□ -0.32
SMARCA4-218ENST00000592158 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-218ENST00000592158 TRAF5O00463 557 aa13.04□□□□□ -0.32
SMARCA4-218ENST00000592158 COL9A1P20849 921 aa13.04□□□□□ -0.32
SMARCA4-218ENST00000592158 PKN2Q16513 984 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-218ENST00000592158 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms