RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 ATG3Q9NT62 314 aa26.73■■□□□ 1.87
TNFRSF11A-204ENST00000592013 IL13P35225 146 aa26.72■■□□□ 1.87
TNFRSF11A-204ENST00000592013 PELP1Q8IZL8 1130 aaKnown RBP26.72■■□□□ 1.87
TNFRSF11A-204ENST00000592013 GNPATO15228 680 aa26.71■■□□□ 1.87
TNFRSF11A-204ENST00000592013 PHF14O94880 888 aa26.71■■□□□ 1.87
TNFRSF11A-204ENST00000592013 MSL1Q68DK7 614 aa26.71■■□□□ 1.87
TNFRSF11A-204ENST00000592013 CHD4Q14839 1912 aa26.7■■□□□ 1.86
TNFRSF11A-204ENST00000592013 ZNF831Q5JPB2 1677 aa26.7■■□□□ 1.86
TNFRSF11A-204ENST00000592013 ADRA2BP18089 450 aa26.69■■□□□ 1.86
TNFRSF11A-204ENST00000592013 LINC00116Q8NCU8 138 aa26.69■■□□□ 1.86
TNFRSF11A-204ENST00000592013 RBM42Q9BTD8 480 aaKnown RBP26.69■■□□□ 1.86
TNFRSF11A-204ENST00000592013 RTCBQ9Y3I0 505 aaKnown RBP26.69■■□□□ 1.86
TNFRSF11A-204ENST00000592013 NPC1L1Q9UHC9 1359 aa26.69■■□□□ 1.86
TNFRSF11A-204ENST00000592013 UBR3Q6ZT12 1888 aa26.68■■□□□ 1.86
TNFRSF11A-204ENST00000592013 RC3H1Q5TC82 1133 aaKnown RBP26.67■■□□□ 1.86
TNFRSF11A-204ENST00000592013 AEBP1Q8IUX7 1158 aa26.67■■□□□ 1.86
TNFRSF11A-204ENST00000592013 PER1O15534 1290 aaPredicted RBP26.66■■□□□ 1.86
TNFRSF11A-204ENST00000592013 DIAPH1O60610 1272 aaKnown RBP26.66■■□□□ 1.86
TNFRSF11A-204ENST00000592013 AKAP4Q5JQC9 854 aa26.66■■□□□ 1.86
TNFRSF11A-204ENST00000592013 TRAPPC3LQ5T215 181 aa26.66■■□□□ 1.86
TNFRSF11A-204ENST00000592013 ITPK1Q13572 414 aa26.65■■□□□ 1.86
TNFRSF11A-204ENST00000592013 NLGN2Q8NFZ4 835 aa26.65■■□□□ 1.86
TNFRSF11A-204ENST00000592013 CC2D1BQ5T0F9 858 aaKnown RBP26.64■■□□□ 1.86
TNFRSF11A-204ENST00000592013 KDM6AO15550 1401 aaPredicted RBP26.64■■□□□ 1.85
TNFRSF11A-204ENST00000592013 CNTNAP4Q9C0A0 1308 aa26.64■■□□□ 1.85
TNFRSF11A-204ENST00000592013 NLGN1Q8N2Q7 840 aa26.63■■□□□ 1.85
TNFRSF11A-204ENST00000592013 ZNF784Q8NCA9 323 aaPredicted RBP26.63■■□□□ 1.85
TNFRSF11A-204ENST00000592013 NFATC2IPQ8NCF5 419 aa26.61■■□□□ 1.85
TNFRSF11A-204ENST00000592013 RFC4P35249 363 aa26.59■■□□□ 1.85
TNFRSF11A-204ENST00000592013 RPS6KA4O75676 772 aa26.58■■□□□ 1.85
TNFRSF11A-204ENST00000592013 CFAP53Q96M91 514 aa26.58■■□□□ 1.85
TNFRSF11A-204ENST00000592013 PTCD1O75127 700 aaKnown RBP26.57■■□□□ 1.84
TNFRSF11A-204ENST00000592013 AMIGO3Q86WK7 504 aa26.56■■□□□ 1.84
TNFRSF11A-204ENST00000592013 SLC52A2Q9HAB3 445 aa26.56■■□□□ 1.84
TNFRSF11A-204ENST00000592013 HMOX1P09601 288 aa26.55■■□□□ 1.84
TNFRSF11A-204ENST00000592013 UTRNP46939 3433 aa26.54■■□□□ 1.84
TNFRSF11A-204ENST00000592013 SCN11AQ9UI33 1791 aa26.54■■□□□ 1.84
TNFRSF11A-204ENST00000592013 MMP10P09238 476 aa26.54■■□□□ 1.84
TNFRSF11A-204ENST00000592013 COL5A3P25940 1745 aaPredicted RBP26.53■■□□□ 1.84
TNFRSF11A-204ENST00000592013 YBX3P16989 372 aaKnown RBP eCLIP26.52■■□□□ 1.84
TNFRSF11A-204ENST00000592013 ARHGEF1Q92888 912 aaKnown RBP26.52■■□□□ 1.84
TNFRSF11A-204ENST00000592013 SLC4A9Q96Q91 983 aa26.52■■□□□ 1.84
TNFRSF11A-204ENST00000592013 U2SURPO15042 1029 aaKnown RBP26.51■■□□□ 1.83
TNFRSF11A-204ENST00000592013 GAS2L2Q8NHY3 880 aa26.51■■□□□ 1.83
TNFRSF11A-204ENST00000592013 CCDC87Q9NVE4 849 aa26.51■■□□□ 1.83
TNFRSF11A-204ENST00000592013 NUDCQ9Y266 331 aa26.51■■□□□ 1.83
TNFRSF11A-204ENST00000592013 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
TNFRSF11A-204ENST00000592013 CRKLP46109 303 aaKnown RBP26.5■■□□□ 1.83
TNFRSF11A-204ENST00000592013 TGFB2P61812 414 aa26.5■■□□□ 1.83
TNFRSF11A-204ENST00000592013 PARP3Q9Y6F1 533 aa26.5■■□□□ 1.83
TNFRSF11A-204ENST00000592013 CICQ96RK0 1608 aaPredicted RBP26.5■■□□□ 1.83
TNFRSF11A-204ENST00000592013 MTHFSDQ2M296 383 aaKnown RBP26.49■■□□□ 1.83
TNFRSF11A-204ENST00000592013 SMIM5Q71RC9 77 aa26.49■■□□□ 1.83
TNFRSF11A-204ENST00000592013 MRC1P22897 1456 aa26.49■■□□□ 1.83
TNFRSF11A-204ENST00000592013 VSIG10Q8N0Z9 540 aa26.47■■□□□ 1.83
TNFRSF11A-204ENST00000592013 GYS1P13807 737 aa26.46■■□□□ 1.83
TNFRSF11A-204ENST00000592013 TTC5Q8N0Z6 440 aa26.46■■□□□ 1.83
TNFRSF11A-204ENST00000592013 TEFQ10587 303 aa26.45■■□□□ 1.82
TNFRSF11A-204ENST00000592013 CNGB1Q14028 1251 aaPredicted RBP26.45■■□□□ 1.82
TNFRSF11A-204ENST00000592013 LGR6Q9HBX8 967 aa26.45■■□□□ 1.82
TNFRSF11A-204ENST00000592013 GNAT3A8MTJ3 354 aa26.44■■□□□ 1.82
TNFRSF11A-204ENST00000592013 ZPR1O75312 459 aa26.44■■□□□ 1.82
TNFRSF11A-204ENST00000592013 GIGYF1O75420 1035 aaPredicted RBP26.44■■□□□ 1.82
TNFRSF11A-204ENST00000592013 GOLGB1Q14789 3259 aaKnown RBP26.43■■□□□ 1.82
TNFRSF11A-204ENST00000592013 COL3A1P02461 1466 aaPredicted RBP26.42■■□□□ 1.82
TNFRSF11A-204ENST00000592013 USP42Q9H9J4 1324 aaKnown RBP26.41■■□□□ 1.82
TNFRSF11A-204ENST00000592013 STARD3NLO95772 234 aa26.41■■□□□ 1.82
TNFRSF11A-204ENST00000592013 TEX13AQ9BXU3 409 aaPredicted RBP26.41■■□□□ 1.82
TNFRSF11A-204ENST00000592013 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
TNFRSF11A-204ENST00000592013 C10orf71Q711Q0 1435 aa26.4■■□□□ 1.82
TNFRSF11A-204ENST00000592013 C4AP0C0L4 1744 aa26.4■■□□□ 1.82
TNFRSF11A-204ENST00000592013 TJP1Q07157 1748 aa26.4■■□□□ 1.82
TNFRSF11A-204ENST00000592013 INTS5Q6P9B9 1019 aaKnown RBP26.39■■□□□ 1.82
TNFRSF11A-204ENST00000592013 DNAJC10Q8IXB1 793 aa26.39■■□□□ 1.82
TNFRSF11A-204ENST00000592013 KIF13BQ9NQT8 1826 aa26.38■■□□□ 1.81
TNFRSF11A-204ENST00000592013 CYP19A1P11511 503 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF11A-204ENST00000592013 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
TNFRSF11A-204ENST00000592013 MYH14Q7Z406 1995 aaKnown RBP26.37■■□□□ 1.81
TNFRSF11A-204ENST00000592013 NEFMP07197 916 aa26.36■■□□□ 1.81
TNFRSF11A-204ENST00000592013 SLC39A6Q13433 755 aa26.36■■□□□ 1.81
TNFRSF11A-204ENST00000592013 NPM2Q86SE8 214 aaKnown RBP26.36■■□□□ 1.81
TNFRSF11A-204ENST00000592013 SOS1Q07889 1333 aaPredicted RBP26.36■■□□□ 1.81
TNFRSF11A-204ENST00000592013 PXDNLA1KZ92 1463 aa26.36■■□□□ 1.81
TNFRSF11A-204ENST00000592013 VIRMAQ69YN4 1812 aaKnown RBP26.35■■□□□ 1.81
TNFRSF11A-204ENST00000592013 A0A087WZG4 1122 aa26.35■■□□□ 1.81
TNFRSF11A-204ENST00000592013 GPBP1L1Q9HC44 474 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF11A-204ENST00000592013 RTF1Q92541 710 aaKnown RBP26.34■■□□□ 1.81
TNFRSF11A-204ENST00000592013 KCPQ6ZWJ8 1503 aa26.34■■□□□ 1.81
TNFRSF11A-204ENST00000592013 ATP10DQ9P241 1426 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 FCHSD2O94868 740 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 U2AF1L5P0DN76 240 aaPredicted RBP26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 PRKAR2BP31323 418 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 U2AF1Q01081 240 aaKnown RBP eCLIP26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 FKBP8Q14318 412 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 NARFQ9UHQ1 456 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 BCS1LQ9Y276 419 aa26.33■■□□□ 1.81
TNFRSF11A-204ENST00000592013 PPP2R1AP30153 589 aa26.32■■□□□ 1.8
TNFRSF11A-204ENST00000592013 ZNF790Q6PG37 636 aa26.32■■□□□ 1.8
TNFRSF11A-204ENST00000592013 SRP68Q9UHB9 627 aaKnown RBP26.32■■□□□ 1.8
TNFRSF11A-204ENST00000592013 COL15A1P39059 1388 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms