RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 ITPK1Q13572 414 aa23.68■■□□□ 1.38
POLR2E-208ENST00000591709 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
POLR2E-208ENST00000591709 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
POLR2E-208ENST00000591709 MYH14Q7Z406 1995 aaKnown RBP23.67■■□□□ 1.38
POLR2E-208ENST00000591709 TNRC6CQ9HCJ0 1690 aaKnown RBP23.67■■□□□ 1.38
POLR2E-208ENST00000591709 KIF24Q5T7B8 1368 aa23.66■■□□□ 1.38
POLR2E-208ENST00000591709 ATP6V1AP38606 617 aa23.65■■□□□ 1.38
POLR2E-208ENST00000591709 TMOD3Q9NYL9 352 aa23.65■■□□□ 1.38
POLR2E-208ENST00000591709 ASAP1Q9ULH1 1129 aa23.65■■□□□ 1.38
POLR2E-208ENST00000591709 A0A0G2JLW4 131 aa23.64■■□□□ 1.37
POLR2E-208ENST00000591709 NKX1-1Q15270 411 aaPredicted RBP23.64■■□□□ 1.37
POLR2E-208ENST00000591709 ARHGAP27Q6ZUM4 889 aa23.64■■□□□ 1.37
POLR2E-208ENST00000591709 HTRA3P83110 453 aa23.63■■□□□ 1.37
POLR2E-208ENST00000591709 EMILIN1Q9Y6C2 1016 aa23.63■■□□□ 1.37
POLR2E-208ENST00000591709 TGFB2P61812 414 aa23.62■■□□□ 1.37
POLR2E-208ENST00000591709 SPG7Q9UQ90 795 aa23.62■■□□□ 1.37
POLR2E-208ENST00000591709 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
POLR2E-208ENST00000591709 FCHSD2O94868 740 aa23.6■■□□□ 1.37
POLR2E-208ENST00000591709 KDRP35968 1356 aa23.6■■□□□ 1.37
POLR2E-208ENST00000591709 PLEKHG2Q9H7P9 1386 aa23.6■■□□□ 1.37
POLR2E-208ENST00000591709 CCDC88AQ3V6T2 1871 aa23.6■■□□□ 1.37
POLR2E-208ENST00000591709 DPEP1P16444 411 aa23.59■■□□□ 1.37
POLR2E-208ENST00000591709 COL13A1Q5TAT6 717 aaPredicted RBP23.59■■□□□ 1.37
POLR2E-208ENST00000591709 RBM46Q8TBY0 533 aaKnown RBP23.59■■□□□ 1.37
POLR2E-208ENST00000591709 CAPN15O75808 1086 aa23.58■■□□□ 1.37
POLR2E-208ENST00000591709 C16orf71Q8IYS4 520 aaPredicted RBP23.58■■□□□ 1.37
POLR2E-208ENST00000591709 KLRG1Q96E93 195 aa23.58■■□□□ 1.37
POLR2E-208ENST00000591709 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
POLR2E-208ENST00000591709 TMF1P82094 1093 aa23.57■■□□□ 1.36
POLR2E-208ENST00000591709 ATG3Q9NT62 314 aa23.57■■□□□ 1.36
POLR2E-208ENST00000591709 CCDC87Q9NVE4 849 aa23.57■■□□□ 1.36
POLR2E-208ENST00000591709 RTCBQ9Y3I0 505 aaKnown RBP23.57■■□□□ 1.36
POLR2E-208ENST00000591709 SLC24A1O60721 1099 aa23.56■■□□□ 1.36
POLR2E-208ENST00000591709 TRAPPC3LQ5T215 181 aa23.56■■□□□ 1.36
POLR2E-208ENST00000591709 C9orf131Q5VYM1 1079 aa23.56■■□□□ 1.36
POLR2E-208ENST00000591709 NLGN1Q8N2Q7 840 aa23.56■■□□□ 1.36
POLR2E-208ENST00000591709 PHKG2P15735 406 aa23.55■■□□□ 1.36
POLR2E-208ENST00000591709 IFNL2Q8IZJ0 200 aa23.54■■□□□ 1.36
POLR2E-208ENST00000591709 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
POLR2E-208ENST00000591709 EYA1Q99502 592 aa23.53■■□□□ 1.36
POLR2E-208ENST00000591709 PCNTO95613 3336 aa23.53■■□□□ 1.36
POLR2E-208ENST00000591709 TJP1Q07157 1748 aa23.53■■□□□ 1.36
POLR2E-208ENST00000591709 TIAM2Q8IVF5 1701 aa23.53■■□□□ 1.36
POLR2E-208ENST00000591709 GYS1P13807 737 aa23.52■■□□□ 1.36
POLR2E-208ENST00000591709 ARHGEF1Q92888 912 aaKnown RBP23.52■■□□□ 1.36
POLR2E-208ENST00000591709 SLC4A9Q96Q91 983 aa23.52■■□□□ 1.36
POLR2E-208ENST00000591709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
POLR2E-208ENST00000591709 PARP3Q9Y6F1 533 aa23.52■■□□□ 1.36
POLR2E-208ENST00000591709 AFDNP55196 1824 aaKnown RBP23.52■■□□□ 1.36
POLR2E-208ENST00000591709 FSTL1Q12841 308 aa23.51■■□□□ 1.35
POLR2E-208ENST00000591709 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
POLR2E-208ENST00000591709 VIRMAQ69YN4 1812 aaKnown RBP23.5■■□□□ 1.35
POLR2E-208ENST00000591709 ADRA2BP18089 450 aa23.5■■□□□ 1.35
POLR2E-208ENST00000591709 KCNA3P22001 575 aa23.5■■□□□ 1.35
POLR2E-208ENST00000591709 KDM2BQ8NHM5 1336 aa23.5■■□□□ 1.35
POLR2E-208ENST00000591709 CNTNAP4Q9C0A0 1308 aa23.5■■□□□ 1.35
POLR2E-208ENST00000591709 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
POLR2E-208ENST00000591709 RFC4P35249 363 aa23.49■■□□□ 1.35
POLR2E-208ENST00000591709 RNF181Q9P0P0 153 aa23.49■■□□□ 1.35
POLR2E-208ENST00000591709 TNS4Q8IZW8 715 aa23.48■■□□□ 1.35
POLR2E-208ENST00000591709 WASHC2AQ641Q2 1341 aa23.48■■□□□ 1.35
POLR2E-208ENST00000591709 ADAMTS7Q9UKP4 1686 aa23.48■■□□□ 1.35
POLR2E-208ENST00000591709 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
POLR2E-208ENST00000591709 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
POLR2E-208ENST00000591709 PIM2Q9P1W9 311 aa23.47■■□□□ 1.35
POLR2E-208ENST00000591709 RC3H1Q5TC82 1133 aaKnown RBP23.46■■□□□ 1.35
POLR2E-208ENST00000591709 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
POLR2E-208ENST00000591709 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
POLR2E-208ENST00000591709 RRAGCQ9HB90 399 aa23.46■■□□□ 1.35
POLR2E-208ENST00000591709 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
POLR2E-208ENST00000591709 DALRD3Q5D0E6 543 aaKnown RBP23.45■■□□□ 1.34
POLR2E-208ENST00000591709 SCN11AQ9UI33 1791 aa23.45■■□□□ 1.34
POLR2E-208ENST00000591709 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
POLR2E-208ENST00000591709 SRP68Q9UHB9 627 aaKnown RBP23.43■■□□□ 1.34
POLR2E-208ENST00000591709 CHRNA5P30532 468 aa23.42■■□□□ 1.34
POLR2E-208ENST00000591709 ERVV-2B6SEH9 535 aa23.41■■□□□ 1.34
POLR2E-208ENST00000591709 PRELPP51888 382 aa23.41■■□□□ 1.34
POLR2E-208ENST00000591709 DDR1Q08345 913 aa23.41■■□□□ 1.34
POLR2E-208ENST00000591709 CDCA8Q53HL2 280 aa23.41■■□□□ 1.34
POLR2E-208ENST00000591709 SMC1BQ8NDV3 1235 aa23.41■■□□□ 1.34
POLR2E-208ENST00000591709 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
POLR2E-208ENST00000591709 DICER1Q9UPY3 1922 aaKnown RBP23.39■■□□□ 1.34
POLR2E-208ENST00000591709 NRXN2Q9P2S2 1712 aa23.39■■□□□ 1.34
POLR2E-208ENST00000591709 USP42Q9H9J4 1324 aaKnown RBP23.39■■□□□ 1.34
POLR2E-208ENST00000591709 FKBP8Q14318 412 aa23.39■■□□□ 1.33
POLR2E-208ENST00000591709 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
POLR2E-208ENST00000591709 CRKLP46109 303 aaKnown RBP23.38■■□□□ 1.33
POLR2E-208ENST00000591709 RASSF7Q02833 373 aa23.38■■□□□ 1.33
POLR2E-208ENST00000591709 PTCD1O75127 700 aaKnown RBP23.37■■□□□ 1.33
POLR2E-208ENST00000591709 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
POLR2E-208ENST00000591709 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
POLR2E-208ENST00000591709 HSP90AB1P08238 724 aaKnown RBP23.36■■□□□ 1.33
POLR2E-208ENST00000591709 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
POLR2E-208ENST00000591709 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
POLR2E-208ENST00000591709 CABP4P57796 275 aa23.36■■□□□ 1.33
POLR2E-208ENST00000591709 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
POLR2E-208ENST00000591709 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
POLR2E-208ENST00000591709 POLRMTO00411 1230 aaKnown RBP23.33■■□□□ 1.33
POLR2E-208ENST00000591709 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.32
POLR2E-208ENST00000591709 ANKRD31Q8N7Z5 1873 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms