RNA–Protein interactions for RNA: ENST00000591458.1

LINC00662-209, long intergenic non-protein coding RNA 662, humanhuman

TSL 4

Gene LINC00662, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-209ENST00000591458 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
LINC00662-209ENST00000591458 CHD4Q14839 1912 aa16.5■□□□□ 0.23
LINC00662-209ENST00000591458 PHF14O94880 888 aa16.49■□□□□ 0.23
LINC00662-209ENST00000591458 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
LINC00662-209ENST00000591458 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
LINC00662-209ENST00000591458 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
LINC00662-209ENST00000591458 KDRP35968 1356 aa16.49■□□□□ 0.23
LINC00662-209ENST00000591458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
LINC00662-209ENST00000591458 IL13P35225 146 aa16.48■□□□□ 0.23
LINC00662-209ENST00000591458 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
LINC00662-209ENST00000591458 LINC00116Q8NCU8 138 aa16.48■□□□□ 0.23
LINC00662-209ENST00000591458 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
LINC00662-209ENST00000591458 ZNF831Q5JPB2 1677 aa16.48■□□□□ 0.23
LINC00662-209ENST00000591458 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
LINC00662-209ENST00000591458 GNPATO15228 680 aa16.47■□□□□ 0.23
LINC00662-209ENST00000591458 RALBP1Q15311 655 aa16.47■□□□□ 0.23
LINC00662-209ENST00000591458 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
LINC00662-209ENST00000591458 PPP2R1AP30153 589 aa16.46■□□□□ 0.23
LINC00662-209ENST00000591458 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
LINC00662-209ENST00000591458 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
LINC00662-209ENST00000591458 ZNF784Q8NCA9 323 aaPredicted RBP16.46■□□□□ 0.23
LINC00662-209ENST00000591458 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
LINC00662-209ENST00000591458 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
LINC00662-209ENST00000591458 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
LINC00662-209ENST00000591458 CABP4P57796 275 aa16.45■□□□□ 0.22
LINC00662-209ENST00000591458 ITPK1Q13572 414 aa16.45■□□□□ 0.22
LINC00662-209ENST00000591458 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
LINC00662-209ENST00000591458 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
LINC00662-209ENST00000591458 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
LINC00662-209ENST00000591458 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
LINC00662-209ENST00000591458 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
LINC00662-209ENST00000591458 ADRA2BP18089 450 aa16.42■□□□□ 0.22
LINC00662-209ENST00000591458 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
LINC00662-209ENST00000591458 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
LINC00662-209ENST00000591458 COL5A3P25940 1745 aaPredicted RBP16.42■□□□□ 0.22
LINC00662-209ENST00000591458 CICQ96RK0 1608 aaPredicted RBP16.41■□□□□ 0.22
LINC00662-209ENST00000591458 UTRNP46939 3433 aa16.41■□□□□ 0.22
LINC00662-209ENST00000591458 NEFMP07197 916 aa16.4■□□□□ 0.22
LINC00662-209ENST00000591458 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
LINC00662-209ENST00000591458 RC3H1Q5TC82 1133 aaKnown RBP16.4■□□□□ 0.22
LINC00662-209ENST00000591458 MRC1P22897 1456 aa16.4■□□□□ 0.22
LINC00662-209ENST00000591458 HMOX1P09601 288 aa16.39■□□□□ 0.21
LINC00662-209ENST00000591458 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00662-209ENST00000591458 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
LINC00662-209ENST00000591458 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
LINC00662-209ENST00000591458 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
LINC00662-209ENST00000591458 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
LINC00662-209ENST00000591458 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00662-209ENST00000591458 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
LINC00662-209ENST00000591458 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
LINC00662-209ENST00000591458 SLC4A9Q96Q91 983 aa16.37■□□□□ 0.21
LINC00662-209ENST00000591458 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
LINC00662-209ENST00000591458 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
LINC00662-209ENST00000591458 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
LINC00662-209ENST00000591458 MMP10P09238 476 aa16.36■□□□□ 0.21
LINC00662-209ENST00000591458 RFC4P35249 363 aa16.36■□□□□ 0.21
LINC00662-209ENST00000591458 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
LINC00662-209ENST00000591458 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
LINC00662-209ENST00000591458 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
LINC00662-209ENST00000591458 TJP1Q07157 1748 aa16.35■□□□□ 0.21
LINC00662-209ENST00000591458 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
LINC00662-209ENST00000591458 FCHSD2O94868 740 aa16.34■□□□□ 0.21
LINC00662-209ENST00000591458 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
LINC00662-209ENST00000591458 GIGYF1O75420 1035 aaPredicted RBP16.33■□□□□ 0.2
LINC00662-209ENST00000591458 CRKLP46109 303 aaKnown RBP16.33■□□□□ 0.2
LINC00662-209ENST00000591458 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
LINC00662-209ENST00000591458 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.2
LINC00662-209ENST00000591458 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
LINC00662-209ENST00000591458 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
LINC00662-209ENST00000591458 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
LINC00662-209ENST00000591458 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
LINC00662-209ENST00000591458 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
LINC00662-209ENST00000591458 GYS1P13807 737 aa16.31■□□□□ 0.2
LINC00662-209ENST00000591458 RSPH6AQ9H0K4 717 aa16.31■□□□□ 0.2
LINC00662-209ENST00000591458 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
LINC00662-209ENST00000591458 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
LINC00662-209ENST00000591458 ATP10DQ9P241 1426 aa16.3■□□□□ 0.2
LINC00662-209ENST00000591458 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
LINC00662-209ENST00000591458 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
LINC00662-209ENST00000591458 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
LINC00662-209ENST00000591458 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
LINC00662-209ENST00000591458 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
LINC00662-209ENST00000591458 TGFB2P61812 414 aa16.29■□□□□ 0.2
LINC00662-209ENST00000591458 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC00662-209ENST00000591458 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
LINC00662-209ENST00000591458 ADCY9O60503 1353 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 GNAT3A8MTJ3 354 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 ANP32CO43423 234 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
LINC00662-209ENST00000591458 VIRMAQ69YN4 1812 aaKnown RBP16.28■□□□□ 0.2
LINC00662-209ENST00000591458 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
LINC00662-209ENST00000591458 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
LINC00662-209ENST00000591458 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
LINC00662-209ENST00000591458 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.2
LINC00662-209ENST00000591458 COL15A1P39059 1388 aa16.26■□□□□ 0.19
LINC00662-209ENST00000591458 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
LINC00662-209ENST00000591458 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
LINC00662-209ENST00000591458 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms