RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 ATG3Q9NT62 314 aa24.39■■□□□ 1.49
VAT1-208ENST00000590924 KDRP35968 1356 aa24.39■■□□□ 1.49
VAT1-208ENST00000590924 KDM6AO15550 1401 aaPredicted RBP24.38■■□□□ 1.49
VAT1-208ENST00000590924 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
VAT1-208ENST00000590924 AMOTQ4VCS5 1084 aa24.38■■□□□ 1.49
VAT1-208ENST00000590924 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
VAT1-208ENST00000590924 DCAF5Q96JK2 942 aa24.38■■□□□ 1.49
VAT1-208ENST00000590924 MYH14Q7Z406 1995 aaKnown RBP24.38■■□□□ 1.49
VAT1-208ENST00000590924 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.37■■□□□ 1.49
VAT1-208ENST00000590924 ATP6V1AP38606 617 aa24.37■■□□□ 1.49
VAT1-208ENST00000590924 ITPK1Q13572 414 aa24.37■■□□□ 1.49
VAT1-208ENST00000590924 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
VAT1-208ENST00000590924 PHF14O94880 888 aa24.36■■□□□ 1.49
VAT1-208ENST00000590924 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
VAT1-208ENST00000590924 AEBP1Q8IUX7 1158 aa24.35■■□□□ 1.49
VAT1-208ENST00000590924 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
VAT1-208ENST00000590924 CD2APQ9Y5K6 639 aa24.35■■□□□ 1.49
VAT1-208ENST00000590924 KIF13BQ9NQT8 1826 aa24.35■■□□□ 1.49
VAT1-208ENST00000590924 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
VAT1-208ENST00000590924 C4AP0C0L4 1744 aa24.34■■□□□ 1.49
VAT1-208ENST00000590924 GNPATO15228 680 aa24.33■■□□□ 1.49
VAT1-208ENST00000590924 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
VAT1-208ENST00000590924 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
VAT1-208ENST00000590924 IL13P35225 146 aa24.32■■□□□ 1.48
VAT1-208ENST00000590924 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
VAT1-208ENST00000590924 YBX3P16989 372 aaKnown RBP eCLIP24.31■■□□□ 1.486e-13■□□□□ 8.2
VAT1-208ENST00000590924 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
VAT1-208ENST00000590924 TJP1Q07157 1748 aa24.3■■□□□ 1.48
VAT1-208ENST00000590924 SLC4A9Q96Q91 983 aa24.3■■□□□ 1.48
VAT1-208ENST00000590924 GRIN3BO60391 1043 aa24.29■■□□□ 1.48
VAT1-208ENST00000590924 CABP4P57796 275 aa24.29■■□□□ 1.48
VAT1-208ENST00000590924 MTHFSP49914 203 aa24.28■■□□□ 1.48
VAT1-208ENST00000590924 RBM42Q9BTD8 480 aaKnown RBP24.28■■□□□ 1.48
VAT1-208ENST00000590924 CNTNAP4Q9C0A0 1308 aa24.27■■□□□ 1.48
VAT1-208ENST00000590924 ADAMTS7Q9UKP4 1686 aa24.27■■□□□ 1.48
VAT1-208ENST00000590924 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
VAT1-208ENST00000590924 RC3H1Q5TC82 1133 aaKnown RBP24.26■■□□□ 1.47
VAT1-208ENST00000590924 RTCBQ9Y3I0 505 aaKnown RBP24.26■■□□□ 1.47
VAT1-208ENST00000590924 NPC1L1Q9UHC9 1359 aa24.25■■□□□ 1.47
VAT1-208ENST00000590924 MRC1P22897 1456 aa24.25■■□□□ 1.47
VAT1-208ENST00000590924 N4BP2Q86UW6 1770 aaPredicted RBP24.24■■□□□ 1.47
VAT1-208ENST00000590924 ADRA2BP18089 450 aa24.23■■□□□ 1.47
VAT1-208ENST00000590924 BRCA1P38398 1863 aaKnown RBP24.23■■□□□ 1.47
VAT1-208ENST00000590924 DDX10Q13206 875 aaKnown RBP24.22■■□□□ 1.47
VAT1-208ENST00000590924 TRAPPC3LQ5T215 181 aa24.22■■□□□ 1.47
VAT1-208ENST00000590924 NFATC2IPQ8NCF5 419 aa24.22■■□□□ 1.47
VAT1-208ENST00000590924 AKAP4Q5JQC9 854 aa24.21■■□□□ 1.47
VAT1-208ENST00000590924 CC2D1BQ5T0F9 858 aaKnown RBP24.21■■□□□ 1.47
VAT1-208ENST00000590924 RPS6KA4O75676 772 aa24.2■■□□□ 1.46
VAT1-208ENST00000590924 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
VAT1-208ENST00000590924 UBR2Q8IWV8 1755 aa24.19■■□□□ 1.46
VAT1-208ENST00000590924 PTCD1O75127 700 aaKnown RBP24.19■■□□□ 1.46
VAT1-208ENST00000590924 MMP10P09238 476 aa24.19■■□□□ 1.46
VAT1-208ENST00000590924 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
VAT1-208ENST00000590924 DIAPH1O60610 1272 aaKnown RBP24.18■■□□□ 1.46
VAT1-208ENST00000590924 NLGN1Q8N2Q7 840 aa24.18■■□□□ 1.46
VAT1-208ENST00000590924 HMOX1P09601 288 aa24.17■■□□□ 1.46
VAT1-208ENST00000590924 RFC4P35249 363 aa24.16■■□□□ 1.46
VAT1-208ENST00000590924 SLC52A2Q9HAB3 445 aa24.16■■□□□ 1.46
VAT1-208ENST00000590924 C10orf71Q711Q0 1435 aa24.16■■□□□ 1.46
VAT1-208ENST00000590924 SIPA1L3O60292 1781 aaPredicted RBP24.16■■□□□ 1.46
VAT1-208ENST00000590924 PXDNLA1KZ92 1463 aa24.15■■□□□ 1.46
VAT1-208ENST00000590924 GYS1P13807 737 aa24.15■■□□□ 1.46
VAT1-208ENST00000590924 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
VAT1-208ENST00000590924 C1QTNF8P60827 252 aa24.14■■□□□ 1.45
VAT1-208ENST00000590924 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.45
VAT1-208ENST00000590924 KCPQ6ZWJ8 1503 aa24.14■■□□□ 1.45
VAT1-208ENST00000590924 RNMTO43148 476 aaKnown RBP24.13■■□□□ 1.45
VAT1-208ENST00000590924 LGR6Q9HBX8 967 aa24.13■■□□□ 1.45
VAT1-208ENST00000590924 ADCY9O60503 1353 aa24.13■■□□□ 1.45
VAT1-208ENST00000590924 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
VAT1-208ENST00000590924 ATP10DQ9P241 1426 aa24.11■■□□□ 1.45
VAT1-208ENST00000590924 GIGYF1O75420 1035 aaPredicted RBP24.11■■□□□ 1.45
VAT1-208ENST00000590924 TGFB2P61812 414 aa24.1■■□□□ 1.45
VAT1-208ENST00000590924 WWC3Q9ULE0 1092 aa24.1■■□□□ 1.45
VAT1-208ENST00000590924 AFDNP55196 1824 aaKnown RBP24.1■■□□□ 1.45
VAT1-208ENST00000590924 CCDC87Q9NVE4 849 aa24.09■■□□□ 1.45
VAT1-208ENST00000590924 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
VAT1-208ENST00000590924 INTS5Q6P9B9 1019 aaKnown RBP24.08■■□□□ 1.45
VAT1-208ENST00000590924 PARP3Q9Y6F1 533 aa24.08■■□□□ 1.45
VAT1-208ENST00000590924 DNAJC10Q8IXB1 793 aa24.07■■□□□ 1.44
VAT1-208ENST00000590924 SLC39A6Q13433 755 aa24.06■■□□□ 1.44
VAT1-208ENST00000590924 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
VAT1-208ENST00000590924 NRXN2Q9P2S2 1712 aa24.04■■□□□ 1.44
VAT1-208ENST00000590924 U2SURPO15042 1029 aaKnown RBP24.04■■□□□ 1.44
VAT1-208ENST00000590924 CNGB1Q14028 1251 aaPredicted RBP24.04■■□□□ 1.44
VAT1-208ENST00000590924 SOS1Q07889 1333 aaPredicted RBP24.04■■□□□ 1.44
VAT1-208ENST00000590924 SENP3-EIF4A1A0A087X0R7 540 aa24.03■■□□□ 1.44
VAT1-208ENST00000590924 CYP19A1P11511 503 aaPredicted RBP24.03■■□□□ 1.44
VAT1-208ENST00000590924 FKBP8Q14318 412 aa24.03■■□□□ 1.44
VAT1-208ENST00000590924 VSIG10Q8N0Z9 540 aa24.03■■□□□ 1.44
VAT1-208ENST00000590924 A0A0G2JLW4 131 aa24.02■■□□□ 1.44
VAT1-208ENST00000590924 GAS2L2Q8NHY3 880 aa24.02■■□□□ 1.44
VAT1-208ENST00000590924 DLEC1Q9Y238 1755 aa24.01■■□□□ 1.43
VAT1-208ENST00000590924 RALBP1Q15311 655 aa24.01■■□□□ 1.43
VAT1-208ENST00000590924 BCS1LQ9Y276 419 aa24.01■■□□□ 1.43
VAT1-208ENST00000590924 COL15A1P39059 1388 aa24.01■■□□□ 1.43
VAT1-208ENST00000590924 DPEP1P16444 411 aa24■■□□□ 1.43
VAT1-208ENST00000590924 DDR1Q08345 913 aa24■■□□□ 1.43
VAT1-208ENST00000590924 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms