RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 ABCA3Q99758 1704 aa28.11■■■□□ 2.09
RUNDC3A-205ENST00000590834 FAM161AQ3B820 660 aa28.11■■■□□ 2.09
RUNDC3A-205ENST00000590834 BTBD11A6QL63 1104 aa28.1■■■□□ 2.09
RUNDC3A-205ENST00000590834 KCNQ3O43525 872 aa28.1■■■□□ 2.09
RUNDC3A-205ENST00000590834 TATP17735 454 aaPredicted RBP28.1■■■□□ 2.09
RUNDC3A-205ENST00000590834 NECTIN2Q92692 538 aa28.1■■■□□ 2.09
RUNDC3A-205ENST00000590834 PRDM11Q9NQV5 511 aa28.08■■■□□ 2.09
RUNDC3A-205ENST00000590834 SIPA1L3O60292 1781 aaPredicted RBP28.08■■■□□ 2.09
RUNDC3A-205ENST00000590834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.08
RUNDC3A-205ENST00000590834 CACNA1FO60840 1977 aa28.06■■■□□ 2.08
RUNDC3A-205ENST00000590834 SIRT2Q8IXJ6 389 aa28.06■■■□□ 2.08
RUNDC3A-205ENST00000590834 PLEKHG2Q9H7P9 1386 aa28.06■■■□□ 2.08
RUNDC3A-205ENST00000590834 FLIIQ13045 1269 aa28.06■■■□□ 2.08
RUNDC3A-205ENST00000590834 HDGFL1Q5TGJ6 251 aa28.06■■■□□ 2.08
RUNDC3A-205ENST00000590834 F6X3S4 739 aa28.05■■■□□ 2.08
RUNDC3A-205ENST00000590834 SPG7Q9UQ90 795 aa28.05■■■□□ 2.08
RUNDC3A-205ENST00000590834 HOXB7P09629 217 aa28.04■■■□□ 2.08
RUNDC3A-205ENST00000590834 PHKG2P15735 406 aa28.03■■■□□ 2.08
RUNDC3A-205ENST00000590834 KDM6AO15550 1401 aaPredicted RBP28.03■■■□□ 2.08
RUNDC3A-205ENST00000590834 PKD1L3Q7Z443 1732 aa28.03■■■□□ 2.08
RUNDC3A-205ENST00000590834 WDR17Q8IZU2 1322 aa28.02■■■□□ 2.08
RUNDC3A-205ENST00000590834 COL5A2P05997 1499 aaPredicted RBP28.02■■■□□ 2.08
RUNDC3A-205ENST00000590834 SCN11AQ9UI33 1791 aa28.02■■■□□ 2.08
RUNDC3A-205ENST00000590834 ANP32AP39687 249 aaKnown RBP28■■■□□ 2.07
RUNDC3A-205ENST00000590834 FKBP5Q13451 457 aaPredicted RBP28■■■□□ 2.07
RUNDC3A-205ENST00000590834 SLC4A10Q6U841 1118 aa28■■■□□ 2.07
RUNDC3A-205ENST00000590834 CCT4P50991 539 aaKnown RBP28■■■□□ 2.07
RUNDC3A-205ENST00000590834 IFNL2Q8IZJ0 200 aa28■■■□□ 2.07
RUNDC3A-205ENST00000590834 MEIS3Q99687 375 aa28■■■□□ 2.07
RUNDC3A-205ENST00000590834 HEG1Q9ULI3 1381 aa27.99■■■□□ 2.07
RUNDC3A-205ENST00000590834 EIF2S2P20042 333 aaKnown RBP27.99■■■□□ 2.07
RUNDC3A-205ENST00000590834 NUCB1Q02818 461 aa27.99■■■□□ 2.07
RUNDC3A-205ENST00000590834 ATP10DQ9P241 1426 aa27.99■■■□□ 2.07
RUNDC3A-205ENST00000590834 CYP27B1O15528 508 aa27.98■■■□□ 2.07
RUNDC3A-205ENST00000590834 NPM2Q86SE8 214 aaKnown RBP27.97■■■□□ 2.07
RUNDC3A-205ENST00000590834 GCC1Q96CN9 775 aa27.97■■■□□ 2.07
RUNDC3A-205ENST00000590834 PHAXQ9H814 394 aaKnown RBP27.97■■■□□ 2.07
RUNDC3A-205ENST00000590834 LTBP4Q8N2S1 1624 aa27.97■■■□□ 2.07
RUNDC3A-205ENST00000590834 TOM1L2Q6ZVM7 507 aa27.96■■■□□ 2.07
RUNDC3A-205ENST00000590834 SLC52A2Q9HAB3 445 aa27.96■■■□□ 2.07
RUNDC3A-205ENST00000590834 ROBO1Q9Y6N7 1651 aa27.96■■■□□ 2.07
RUNDC3A-205ENST00000590834 GIGYF1O75420 1035 aaPredicted RBP27.95■■■□□ 2.06
RUNDC3A-205ENST00000590834 CHPF2Q9P2E5 772 aa27.95■■■□□ 2.06
RUNDC3A-205ENST00000590834 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
RUNDC3A-205ENST00000590834 CHD1LQ86WJ1 897 aa27.94■■■□□ 2.06
RUNDC3A-205ENST00000590834 ANKRD44Q8N8A2 993 aa27.94■■■□□ 2.06
RUNDC3A-205ENST00000590834 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
RUNDC3A-205ENST00000590834 PARP4Q9UKK3 1724 aaKnown RBP27.93■■■□□ 2.06
RUNDC3A-205ENST00000590834 PXDNLA1KZ92 1463 aa27.93■■■□□ 2.06
RUNDC3A-205ENST00000590834 MRC1P22897 1456 aa27.93■■■□□ 2.06
RUNDC3A-205ENST00000590834 CEP85Q6P2H3 762 aa27.93■■■□□ 2.06
RUNDC3A-205ENST00000590834 DCAF5Q96JK2 942 aa27.93■■■□□ 2.06
RUNDC3A-205ENST00000590834 RPAP2Q8IXW5 612 aaPredicted RBP27.92■■■□□ 2.06
RUNDC3A-205ENST00000590834 NFATC2IPQ8NCF5 419 aa27.92■■■□□ 2.06
RUNDC3A-205ENST00000590834 LNPKQ9C0E8 428 aa27.92■■■□□ 2.06
RUNDC3A-205ENST00000590834 PRAMEF22A3QJZ6 481 aa27.91■■■□□ 2.06
RUNDC3A-205ENST00000590834 ZNF790Q6PG37 636 aa27.91■■■□□ 2.06
RUNDC3A-205ENST00000590834 CARD10Q9BWT7 1032 aa27.91■■■□□ 2.06
RUNDC3A-205ENST00000590834 AHDC1Q5TGY3 1603 aaPredicted RBP27.9■■■□□ 2.06
RUNDC3A-205ENST00000590834 SLC39A6Q13433 755 aa27.9■■■□□ 2.06
RUNDC3A-205ENST00000590834 IPO9Q96P70 1041 aaKnown RBP27.9■■■□□ 2.06
RUNDC3A-205ENST00000590834 ANKRD45Q5TZF3 282 aa27.89■■■□□ 2.06
RUNDC3A-205ENST00000590834 LARP1Q6PKG0 1096 aaKnown RBP27.89■■■□□ 2.06
RUNDC3A-205ENST00000590834 ERICH6Q7L0X2 663 aa27.89■■■□□ 2.06
RUNDC3A-205ENST00000590834 STRN4Q9NRL3 753 aa27.89■■■□□ 2.06
RUNDC3A-205ENST00000590834 HSP90AB1P08238 724 aaKnown RBP27.88■■■□□ 2.05
RUNDC3A-205ENST00000590834 DCTPP1Q9H773 170 aa27.88■■■□□ 2.05
RUNDC3A-205ENST00000590834 ANXA1P04083 346 aa27.88■■■□□ 2.05
RUNDC3A-205ENST00000590834 DBF4Q9UBU7 674 aaPredicted RBP27.87■■■□□ 2.05
RUNDC3A-205ENST00000590834 ZCRB1Q8TBF4 217 aaKnown RBP27.86■■■□□ 2.05
RUNDC3A-205ENST00000590834 EVA1CP58658 441 aa27.85■■■□□ 2.05
RUNDC3A-205ENST00000590834 IL2RBP14784 551 aa27.85■■■□□ 2.05
RUNDC3A-205ENST00000590834 PCDH11XQ9BZA7 1347 aa27.84■■■□□ 2.05
RUNDC3A-205ENST00000590834 PCDH11YQ9BZA8 1340 aa27.84■■■□□ 2.05
RUNDC3A-205ENST00000590834 SEC24BO95487 1268 aa27.84■■■□□ 2.05
RUNDC3A-205ENST00000590834 PROSER3Q2NL68 480 aa27.84■■■□□ 2.05
RUNDC3A-205ENST00000590834 C5P01031 1676 aa27.84■■■□□ 2.05
RUNDC3A-205ENST00000590834 GNAI2P04899 355 aa27.83■■■□□ 2.05
RUNDC3A-205ENST00000590834 COL22A1Q8NFW1 1626 aaPredicted RBP27.83■■■□□ 2.05
RUNDC3A-205ENST00000590834 GNAI3P08754 354 aa27.82■■■□□ 2.04
RUNDC3A-205ENST00000590834 SHANK3Q9BYB0 1731 aa27.82■■■□□ 2.04
RUNDC3A-205ENST00000590834 PI4KAP2A4QPH2 592 aa27.82■■■□□ 2.04
RUNDC3A-205ENST00000590834 PI4KAP1Q8N8J0 262 aa27.82■■■□□ 2.04
RUNDC3A-205ENST00000590834 USP44Q9H0E7 712 aa27.81■■■□□ 2.04
RUNDC3A-205ENST00000590834 ADCY9O60503 1353 aa27.81■■■□□ 2.04
RUNDC3A-205ENST00000590834 ZNF496Q96IT1 587 aaPredicted RBP27.81■■■□□ 2.04
RUNDC3A-205ENST00000590834 BTG4Q9NY30 223 aa27.81■■■□□ 2.04
RUNDC3A-205ENST00000590834 CABP4P57796 275 aa27.8■■■□□ 2.04
RUNDC3A-205ENST00000590834 DNAAF4Q8WXU2 420 aa27.8■■■□□ 2.04
RUNDC3A-205ENST00000590834 SRCIN1Q9C0H9 1055 aa27.79■■■□□ 2.04
RUNDC3A-205ENST00000590834 BEND3Q5T5X7 828 aa27.79■■■□□ 2.04
RUNDC3A-205ENST00000590834 COL14A1Q05707 1796 aaKnown RBP27.78■■■□□ 2.04
RUNDC3A-205ENST00000590834 PDIA6Q15084 440 aa27.78■■■□□ 2.04
RUNDC3A-205ENST00000590834 COL16A1Q07092 1604 aaPredicted RBP27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 HMMRO75330 724 aa27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 NKX1-1Q15270 411 aaPredicted RBP27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 TTC5Q8N0Z6 440 aa27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 DDX21Q9NR30 783 aaKnown RBP eCLIP27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 HYPKQ9NX55 129 aa27.77■■■□□ 2.04
RUNDC3A-205ENST00000590834 USP35Q9P2H5 1018 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms