RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 WIPF1O43516 503 aa12.47□□□□□ -0.41
NPC1-209ENST00000590723 IL2RAP01589 272 aa12.47□□□□□ -0.41
NPC1-209ENST00000590723 CENPCQ03188 943 aa12.47□□□□□ -0.41
NPC1-209ENST00000590723 ADAMTS19Q8TE59 1207 aa12.47□□□□□ -0.41
NPC1-209ENST00000590723 CALR3Q96L12 384 aaKnown RBP12.47□□□□□ -0.41
NPC1-209ENST00000590723 ZSCAN10Q96SZ4 725 aaPredicted RBP12.47□□□□□ -0.41
NPC1-209ENST00000590723 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.41
NPC1-209ENST00000590723 SPATA31C2B4DYI2 1134 aa12.46□□□□□ -0.41
NPC1-209ENST00000590723 NCOA4Q13772 614 aa12.46□□□□□ -0.41
NPC1-209ENST00000590723 TAS1R3Q7RTX0 852 aa12.46□□□□□ -0.41
NPC1-209ENST00000590723 TRIM50Q86XT4 487 aa12.46□□□□□ -0.41
NPC1-209ENST00000590723 ATP9BO43861 1147 aa12.45□□□□□ -0.42
NPC1-209ENST00000590723 ITGA6P23229 1130 aa12.45□□□□□ -0.42
NPC1-209ENST00000590723 INSM1Q01101 510 aaPredicted RBP12.45□□□□□ -0.42
NPC1-209ENST00000590723 GNASQ5JWF2 1037 aa12.45□□□□□ -0.42
NPC1-209ENST00000590723 TMEM214Q6NUQ4 689 aaKnown RBP12.45□□□□□ -0.42
NPC1-209ENST00000590723 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
NPC1-209ENST00000590723 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
NPC1-209ENST00000590723 INHAP05111 366 aa12.44□□□□□ -0.42
NPC1-209ENST00000590723 RHOQP17081 205 aa12.44□□□□□ -0.42
NPC1-209ENST00000590723 GDF10P55107 478 aa12.44□□□□□ -0.42
NPC1-209ENST00000590723 NANOS1Q8WY41 292 aaKnown RBP12.44□□□□□ -0.42
NPC1-209ENST00000590723 ETNK1Q9HBU6 452 aa12.44□□□□□ -0.42
NPC1-209ENST00000590723 DYRK1BQ9Y463 629 aa12.44□□□□□ -0.42
NPC1-209ENST00000590723 ATP1A2P50993 1020 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 PSME1Q06323 249 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 POU4F2Q12837 409 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 TLR1Q15399 786 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
NPC1-209ENST00000590723 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 GMCL1Q96IK5 515 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 HRH3Q9Y5N1 445 aa12.43□□□□□ -0.42
NPC1-209ENST00000590723 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
NPC1-209ENST00000590723 SENP3-EIF4A1A0A087X0R7 540 aa12.42□□□□□ -0.42
NPC1-209ENST00000590723 GTF2IP78347 998 aa12.42□□□□□ -0.42
NPC1-209ENST00000590723 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
NPC1-209ENST00000590723 USP17L3A6NCW0 530 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 USP17L4A6NCW7 530 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 BACH1O14867 736 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 GMPRP36959 345 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 USP17L2Q6R6M4 530 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 SV2AQ7L0J3 742 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 USP17L1Q7RTZ2 530 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 DEPDC4Q8N2C3 294 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 GTF3C3Q9Y5Q9 886 aa12.41□□□□□ -0.42
NPC1-209ENST00000590723 H7C1W4 665 aa12.4□□□□□ -0.42
NPC1-209ENST00000590723 SCNN1DP51172 638 aa12.4□□□□□ -0.42
NPC1-209ENST00000590723 FHDC1Q9C0D6 1143 aaPredicted RBP12.4□□□□□ -0.42
NPC1-209ENST00000590723 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
NPC1-209ENST00000590723 PCDHGA11Q9Y5H2 935 aa12.4□□□□□ -0.42
NPC1-209ENST00000590723 CDC14CA4D256 554 aa12.39□□□□□ -0.43
NPC1-209ENST00000590723 RHBDD1Q8TEB9 315 aa12.39□□□□□ -0.43
NPC1-209ENST00000590723 PPARGC1BQ86YN6 1023 aaKnown RBP12.38□□□□□ -0.43
NPC1-209ENST00000590723 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
NPC1-209ENST00000590723 SMTNP53814 917 aa12.37□□□□□ -0.43
NPC1-209ENST00000590723 LCE2CQ5TA81 110 aa12.37□□□□□ -0.43
NPC1-209ENST00000590723 FOXR1Q6PIV2 292 aa12.37□□□□□ -0.43
NPC1-209ENST00000590723 RIPOR1Q6ZS17 1223 aa12.37□□□□□ -0.43
NPC1-209ENST00000590723 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
NPC1-209ENST00000590723 A0A1B0GTH6 734 aa12.36□□□□□ -0.43
NPC1-209ENST00000590723 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
NPC1-209ENST00000590723 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
NPC1-209ENST00000590723 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
NPC1-209ENST00000590723 F11P03951 625 aa12.35□□□□□ -0.43
NPC1-209ENST00000590723 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
NPC1-209ENST00000590723 VWA5B2Q8N398 1253 aa12.35□□□□□ -0.43
NPC1-209ENST00000590723 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
NPC1-209ENST00000590723 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
NPC1-209ENST00000590723 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
NPC1-209ENST00000590723 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
NPC1-209ENST00000590723 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
NPC1-209ENST00000590723 ZMYND15Q9H091 742 aa12.34□□□□□ -0.43
NPC1-209ENST00000590723 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
NPC1-209ENST00000590723 PHKA2P46019 1235 aa12.33□□□□□ -0.44
NPC1-209ENST00000590723 C4orf17Q53FE4 359 aa12.33□□□□□ -0.44
NPC1-209ENST00000590723 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
NPC1-209ENST00000590723 DNAAF2Q9NVR5 837 aaKnown RBP12.33□□□□□ -0.44
NPC1-209ENST00000590723 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
NPC1-209ENST00000590723 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
NPC1-209ENST00000590723 A6NJY4 79 aa12.32□□□□□ -0.44
NPC1-209ENST00000590723 MTFR1Q15390 333 aa12.32□□□□□ -0.44
NPC1-209ENST00000590723 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
NPC1-209ENST00000590723 FAM181BA6NEQ2 426 aa12.31□□□□□ -0.44
NPC1-209ENST00000590723 CDK2AP1O14519 115 aa12.31□□□□□ -0.44
NPC1-209ENST00000590723 CSB-PGBD3P0DP91 1061 aa12.31□□□□□ -0.44
NPC1-209ENST00000590723 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
NPC1-209ENST00000590723 PGBD3Q8N328 593 aa12.31□□□□□ -0.44
NPC1-209ENST00000590723 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
NPC1-209ENST00000590723 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
NPC1-209ENST00000590723 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
NPC1-209ENST00000590723 LBRQ14739 615 aaKnown RBP12.29□□□□□ -0.44
NPC1-209ENST00000590723 LARP1Q6PKG0 1096 aaKnown RBP12.29□□□□□ -0.44
NPC1-209ENST00000590723 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPC1-209ENST00000590723 C1orf216Q8TAB5 229 aa12.29□□□□□ -0.44
NPC1-209ENST00000590723 ZNF837Q96EG3 531 aaPredicted RBP12.29□□□□□ -0.44
NPC1-209ENST00000590723 TRERF1Q96PN7 1200 aa12.29□□□□□ -0.44
NPC1-209ENST00000590723 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
NPC1-209ENST00000590723 DNMBPQ6XZF7 1577 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms