RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 CICQ96RK0 1608 aaPredicted RBP19.63■□□□□ 0.73
SAFB2-205ENST00000590000 SSFA2P28290 1259 aa19.63■□□□□ 0.73
SAFB2-205ENST00000590000 CDCA8Q53HL2 280 aa19.63■□□□□ 0.73
SAFB2-205ENST00000590000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.63■□□□□ 0.73
SAFB2-205ENST00000590000 SPG7Q9UQ90 795 aa19.63■□□□□ 0.73
SAFB2-205ENST00000590000 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
SAFB2-205ENST00000590000 KDM6AO15550 1401 aaPredicted RBP19.62■□□□□ 0.73
SAFB2-205ENST00000590000 GNPATO15228 680 aa19.62■□□□□ 0.73
SAFB2-205ENST00000590000 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
SAFB2-205ENST00000590000 TMOD3Q9NYL9 352 aa19.62■□□□□ 0.73
SAFB2-205ENST00000590000 ZNF526Q8TF50 670 aaPredicted RBP19.61■□□□□ 0.73
SAFB2-205ENST00000590000 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
SAFB2-205ENST00000590000 ATP6V1AP38606 617 aa19.6■□□□□ 0.73
SAFB2-205ENST00000590000 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
SAFB2-205ENST00000590000 C4AP0C0L4 1744 aa19.59■□□□□ 0.73
SAFB2-205ENST00000590000 BRCA1P38398 1863 aaKnown RBP19.58■□□□□ 0.73
SAFB2-205ENST00000590000 MMP10P09238 476 aa19.58■□□□□ 0.72
SAFB2-205ENST00000590000 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
SAFB2-205ENST00000590000 KIF3CO14782 793 aa19.56■□□□□ 0.72
SAFB2-205ENST00000590000 GPBP1L1Q9HC44 474 aaPredicted RBP19.56■□□□□ 0.72
SAFB2-205ENST00000590000 C10orf71Q711Q0 1435 aa19.56■□□□□ 0.72
SAFB2-205ENST00000590000 TJP1Q07157 1748 aa19.55■□□□□ 0.72
SAFB2-205ENST00000590000 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
SAFB2-205ENST00000590000 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
SAFB2-205ENST00000590000 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
SAFB2-205ENST00000590000 GYS1P13807 737 aa19.53■□□□□ 0.72
SAFB2-205ENST00000590000 A0A0G2JLW4 131 aa19.52■□□□□ 0.72
SAFB2-205ENST00000590000 PANK3Q9H999 370 aa19.52■□□□□ 0.72
SAFB2-205ENST00000590000 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
SAFB2-205ENST00000590000 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
SAFB2-205ENST00000590000 KCNA3P22001 575 aa19.51■□□□□ 0.71
SAFB2-205ENST00000590000 RBM42Q9BTD8 480 aaKnown RBP19.51■□□□□ 0.71
SAFB2-205ENST00000590000 PLEKHG2Q9H7P9 1386 aa19.5■□□□□ 0.71
SAFB2-205ENST00000590000 DPEP1P16444 411 aa19.5■□□□□ 0.71
SAFB2-205ENST00000590000 HSPA6P17066 643 aa19.5■□□□□ 0.71
SAFB2-205ENST00000590000 RTCBQ9Y3I0 505 aaKnown RBP19.5■□□□□ 0.71
SAFB2-205ENST00000590000 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
SAFB2-205ENST00000590000 RPS6KA4O75676 772 aa19.49■□□□□ 0.71
SAFB2-205ENST00000590000 HMGB2P26583 209 aaKnown RBP19.49■□□□□ 0.71
SAFB2-205ENST00000590000 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
SAFB2-205ENST00000590000 RC3H1Q5TC82 1133 aaKnown RBP19.49■□□□□ 0.71
SAFB2-205ENST00000590000 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
SAFB2-205ENST00000590000 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
SAFB2-205ENST00000590000 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
SAFB2-205ENST00000590000 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
SAFB2-205ENST00000590000 DDR1Q08345 913 aa19.47■□□□□ 0.71
SAFB2-205ENST00000590000 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
SAFB2-205ENST00000590000 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
SAFB2-205ENST00000590000 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
SAFB2-205ENST00000590000 PTCD1O75127 700 aaKnown RBP19.46■□□□□ 0.71
SAFB2-205ENST00000590000 TGFB2P61812 414 aa19.45■□□□□ 0.7
SAFB2-205ENST00000590000 FKBP8Q14318 412 aa19.45■□□□□ 0.7
SAFB2-205ENST00000590000 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
SAFB2-205ENST00000590000 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
SAFB2-205ENST00000590000 NFATC2IPQ8NCF5 419 aa19.45■□□□□ 0.7
SAFB2-205ENST00000590000 VIRMAQ69YN4 1812 aaKnown RBP19.45■□□□□ 0.7
SAFB2-205ENST00000590000 IL13P35225 146 aa19.44■□□□□ 0.7
SAFB2-205ENST00000590000 CRKLP46109 303 aaKnown RBP19.44■□□□□ 0.7
SAFB2-205ENST00000590000 CABP4P57796 275 aa19.44■□□□□ 0.7
SAFB2-205ENST00000590000 ADRA2BP18089 450 aa19.43■□□□□ 0.7
SAFB2-205ENST00000590000 INTS5Q6P9B9 1019 aaKnown RBP19.43■□□□□ 0.7
SAFB2-205ENST00000590000 NMRK2Q9NPI5 230 aa19.43■□□□□ 0.7
SAFB2-205ENST00000590000 MTHFSP49914 203 aa19.42■□□□□ 0.7
SAFB2-205ENST00000590000 SULT6B1Q6IMI4 303 aa19.42■□□□□ 0.7
SAFB2-205ENST00000590000 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
SAFB2-205ENST00000590000 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
SAFB2-205ENST00000590000 RFC4P35249 363 aa19.41■□□□□ 0.7
SAFB2-205ENST00000590000 ARHGAP27Q6ZUM4 889 aa19.41■□□□□ 0.7
SAFB2-205ENST00000590000 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
SAFB2-205ENST00000590000 SBF1O95248 1867 aa19.41■□□□□ 0.7
SAFB2-205ENST00000590000 AFDNP55196 1824 aaKnown RBP19.4■□□□□ 0.7
SAFB2-205ENST00000590000 FCHSD2O94868 740 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 CHRNA5P30532 468 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 EIF4G2P78344 907 aaKnown RBP eCLIP19.4■□□□□ 0.7
SAFB2-205ENST00000590000 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 DNAJC5GQ8N7S2 189 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 CCDC87Q9NVE4 849 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 KCPQ6ZWJ8 1503 aa19.4■□□□□ 0.7
SAFB2-205ENST00000590000 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
SAFB2-205ENST00000590000 DNAJC10Q8IXB1 793 aa19.39■□□□□ 0.69
SAFB2-205ENST00000590000 MRC1P22897 1456 aa19.38■□□□□ 0.69
SAFB2-205ENST00000590000 AMER1Q5JTC6 1135 aaPredicted RBP19.38■□□□□ 0.69
SAFB2-205ENST00000590000 PARP3Q9Y6F1 533 aa19.38■□□□□ 0.69
SAFB2-205ENST00000590000 POLRMTO00411 1230 aaKnown RBP19.37■□□□□ 0.69
SAFB2-205ENST00000590000 TM4SF1P30408 202 aa19.37■□□□□ 0.69
SAFB2-205ENST00000590000 PRELPP51888 382 aa19.37■□□□□ 0.69
SAFB2-205ENST00000590000 SLC39A6Q13433 755 aa19.37■□□□□ 0.69
SAFB2-205ENST00000590000 NRXN2Q9P2S2 1712 aa19.37■□□□□ 0.69
SAFB2-205ENST00000590000 C9orf131Q5VYM1 1079 aa19.36■□□□□ 0.69
SAFB2-205ENST00000590000 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
SAFB2-205ENST00000590000 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
SAFB2-205ENST00000590000 HTRA3P83110 453 aa19.35■□□□□ 0.69
SAFB2-205ENST00000590000 C1orf141Q5JVX7 400 aa19.35■□□□□ 0.69
SAFB2-205ENST00000590000 WDR90Q96KV7 1748 aa19.34■□□□□ 0.69
SAFB2-205ENST00000590000 TOMM70O94826 608 aa19.34■□□□□ 0.69
SAFB2-205ENST00000590000 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
SAFB2-205ENST00000590000 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
SAFB2-205ENST00000590000 HMOX1P09601 288 aa19.33■□□□□ 0.68
SAFB2-205ENST00000590000 CYP19A1P11511 503 aaPredicted RBP19.33■□□□□ 0.68
SAFB2-205ENST00000590000 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms