RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 LINC00116Q8NCU8 138 aa28.07■■■□□ 2.08
NFIC-209ENST00000589969 KDRP35968 1356 aa28.07■■■□□ 2.08
NFIC-209ENST00000589969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.06■■■□□ 2.08
NFIC-209ENST00000589969 MTHFSP49914 203 aa28.05■■■□□ 2.08
NFIC-209ENST00000589969 CABP4P57796 275 aa28.04■■■□□ 2.08
NFIC-209ENST00000589969 ITPK1Q13572 414 aa28.04■■■□□ 2.08
NFIC-209ENST00000589969 PHF14O94880 888 aa28.03■■■□□ 2.08
NFIC-209ENST00000589969 NLGN2Q8NFZ4 835 aa28.02■■■□□ 2.08
NFIC-209ENST00000589969 CD2APQ9Y5K6 639 aa28.02■■■□□ 2.08
NFIC-209ENST00000589969 KDM6AO15550 1401 aaPredicted RBP28.01■■■□□ 2.08
NFIC-209ENST00000589969 GNPATO15228 680 aa28.01■■■□□ 2.07
NFIC-209ENST00000589969 AMIGO3Q86WK7 504 aa28.01■■■□□ 2.07
NFIC-209ENST00000589969 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
NFIC-209ENST00000589969 CC2D1BQ5T0F9 858 aaKnown RBP27.99■■■□□ 2.07
NFIC-209ENST00000589969 RBM42Q9BTD8 480 aaKnown RBP27.99■■■□□ 2.07
NFIC-209ENST00000589969 UBR3Q6ZT12 1888 aa27.99■■■□□ 2.07
NFIC-209ENST00000589969 PELP1Q8IZL8 1130 aaKnown RBP27.98■■■□□ 2.07
NFIC-209ENST00000589969 GRIN3BO60391 1043 aa27.96■■■□□ 2.07
NFIC-209ENST00000589969 AKAP4Q5JQC9 854 aa27.96■■■□□ 2.07
NFIC-209ENST00000589969 RC3H1Q5TC82 1133 aaKnown RBP27.96■■■□□ 2.07
NFIC-209ENST00000589969 RTCBQ9Y3I0 505 aaKnown RBP27.96■■■□□ 2.07
NFIC-209ENST00000589969 ZNF831Q5JPB2 1677 aa27.95■■■□□ 2.07
NFIC-209ENST00000589969 DIAPH1O60610 1272 aaKnown RBP27.95■■■□□ 2.06
NFIC-209ENST00000589969 SMIM5Q71RC9 77 aa27.95■■■□□ 2.06
NFIC-209ENST00000589969 ZNF784Q8NCA9 323 aaPredicted RBP27.95■■■□□ 2.06
NFIC-209ENST00000589969 SLC4A9Q96Q91 983 aa27.95■■■□□ 2.06
NFIC-209ENST00000589969 CHD4Q14839 1912 aa27.94■■■□□ 2.06
NFIC-209ENST00000589969 TRAPPC3LQ5T215 181 aa27.94■■■□□ 2.06
NFIC-209ENST00000589969 NFATC2IPQ8NCF5 419 aa27.94■■■□□ 2.06
NFIC-209ENST00000589969 GOLGB1Q14789 3259 aaKnown RBP27.93■■■□□ 2.06
NFIC-209ENST00000589969 ADRA2BP18089 450 aa27.93■■■□□ 2.06
NFIC-209ENST00000589969 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
NFIC-209ENST00000589969 HMOX1P09601 288 aa27.9■■■□□ 2.06
NFIC-209ENST00000589969 PTCD1O75127 700 aaKnown RBP27.89■■■□□ 2.06
NFIC-209ENST00000589969 RPS6KA4O75676 772 aa27.88■■■□□ 2.05
NFIC-209ENST00000589969 YBX3P16989 372 aaKnown RBP eCLIP27.88■■■□□ 2.05
NFIC-209ENST00000589969 NLGN1Q8N2Q7 840 aa27.88■■■□□ 2.05
NFIC-209ENST00000589969 SLC52A2Q9HAB3 445 aa27.87■■■□□ 2.05
NFIC-209ENST00000589969 RFC4P35249 363 aa27.85■■■□□ 2.05
NFIC-209ENST00000589969 ARHGEF1Q92888 912 aaKnown RBP27.85■■■□□ 2.05
NFIC-209ENST00000589969 MMP10P09238 476 aa27.84■■■□□ 2.05
NFIC-209ENST00000589969 RNMTO43148 476 aaKnown RBP27.83■■■□□ 2.05
NFIC-209ENST00000589969 MTHFSDQ2M296 383 aaKnown RBP27.83■■■□□ 2.05
NFIC-209ENST00000589969 LGR6Q9HBX8 967 aa27.83■■■□□ 2.05
NFIC-209ENST00000589969 COL5A3P25940 1745 aaPredicted RBP27.83■■■□□ 2.05
NFIC-209ENST00000589969 SCN11AQ9UI33 1791 aa27.83■■■□□ 2.05
NFIC-209ENST00000589969 CNGB1Q14028 1251 aaPredicted RBP27.82■■■□□ 2.04
NFIC-209ENST00000589969 CRKLP46109 303 aaKnown RBP27.81■■■□□ 2.04
NFIC-209ENST00000589969 U2SURPO15042 1029 aaKnown RBP27.8■■■□□ 2.04
NFIC-209ENST00000589969 COL3A1P02461 1466 aaPredicted RBP27.8■■■□□ 2.04
NFIC-209ENST00000589969 MRC1P22897 1456 aa27.8■■■□□ 2.04
NFIC-209ENST00000589969 GYS1P13807 737 aa27.79■■■□□ 2.04
NFIC-209ENST00000589969 CFAP53Q96M91 514 aa27.79■■■□□ 2.04
NFIC-209ENST00000589969 CICQ96RK0 1608 aaPredicted RBP27.77■■■□□ 2.04
NFIC-209ENST00000589969 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
NFIC-209ENST00000589969 TGFB2P61812 414 aa27.75■■■□□ 2.03
NFIC-209ENST00000589969 CCDC87Q9NVE4 849 aa27.75■■■□□ 2.03
NFIC-209ENST00000589969 PARP3Q9Y6F1 533 aa27.75■■■□□ 2.03
NFIC-209ENST00000589969 MYH14Q7Z406 1995 aaKnown RBP27.74■■■□□ 2.03
NFIC-209ENST00000589969 INTS5Q6P9B9 1019 aaKnown RBP27.74■■■□□ 2.03
NFIC-209ENST00000589969 SLC39A6Q13433 755 aa27.73■■■□□ 2.03
NFIC-209ENST00000589969 DNAJC10Q8IXB1 793 aa27.73■■■□□ 2.03
NFIC-209ENST00000589969 VSIG10Q8N0Z9 540 aa27.73■■■□□ 2.03
NFIC-209ENST00000589969 USP42Q9H9J4 1324 aaKnown RBP27.72■■■□□ 2.03
NFIC-209ENST00000589969 ADAMTS7Q9UKP4 1686 aa27.72■■■□□ 2.03
NFIC-209ENST00000589969 GNAT3A8MTJ3 354 aa27.72■■■□□ 2.03
NFIC-209ENST00000589969 NUDCQ9Y266 331 aa27.72■■■□□ 2.03
NFIC-209ENST00000589969 TJP1Q07157 1748 aa27.72■■■□□ 2.03
NFIC-209ENST00000589969 C10orf71Q711Q0 1435 aa27.7■■■□□ 2.03
NFIC-209ENST00000589969 CYP19A1P11511 503 aaPredicted RBP27.7■■■□□ 2.02
NFIC-209ENST00000589969 TEFQ10587 303 aa27.69■■■□□ 2.02
NFIC-209ENST00000589969 TTC5Q8N0Z6 440 aa27.69■■■□□ 2.02
NFIC-209ENST00000589969 ZPR1O75312 459 aa27.68■■■□□ 2.02
NFIC-209ENST00000589969 SRP68Q9UHB9 627 aaKnown RBP27.68■■■□□ 2.02
NFIC-209ENST00000589969 SOS1Q07889 1333 aaPredicted RBP27.67■■■□□ 2.02
NFIC-209ENST00000589969 KCPQ6ZWJ8 1503 aa27.67■■■□□ 2.02
NFIC-209ENST00000589969 C4AP0C0L4 1744 aa27.67■■■□□ 2.02
NFIC-209ENST00000589969 PPP2R1AP30153 589 aa27.67■■■□□ 2.02
NFIC-209ENST00000589969 PXDNLA1KZ92 1463 aa27.67■■■□□ 2.02
NFIC-209ENST00000589969 GIGYF1O75420 1035 aaPredicted RBP27.66■■■□□ 2.02
NFIC-209ENST00000589969 C1QTNF8P60827 252 aa27.66■■■□□ 2.02
NFIC-209ENST00000589969 FKBP8Q14318 412 aa27.66■■■□□ 2.02
NFIC-209ENST00000589969 IL17REQ8NFR9 667 aa27.66■■■□□ 2.02
NFIC-209ENST00000589969 WWC3Q9ULE0 1092 aa27.66■■■□□ 2.02
NFIC-209ENST00000589969 KIF13BQ9NQT8 1826 aa27.66■■■□□ 2.02
NFIC-209ENST00000589969 PRKAR2BP31323 418 aa27.65■■■□□ 2.02
NFIC-209ENST00000589969 RSPH6AQ9H0K4 717 aa27.65■■■□□ 2.02
NFIC-209ENST00000589969 A0A0G2JLW4 131 aa27.64■■■□□ 2.02
NFIC-209ENST00000589969 STARD3NLO95772 234 aa27.64■■■□□ 2.02
NFIC-209ENST00000589969 ZNF790Q6PG37 636 aa27.63■■■□□ 2.01
NFIC-209ENST00000589969 TEX13AQ9BXU3 409 aaPredicted RBP27.63■■■□□ 2.01
NFIC-209ENST00000589969 VIRMAQ69YN4 1812 aaKnown RBP27.62■■■□□ 2.01
NFIC-209ENST00000589969 U2AF1L5P0DN76 240 aaPredicted RBP27.62■■■□□ 2.01
NFIC-209ENST00000589969 U2AF1Q01081 240 aaKnown RBP eCLIP27.62■■■□□ 2.01
NFIC-209ENST00000589969 PHACTR3Q96KR7 559 aa27.62■■■□□ 2.01
NFIC-209ENST00000589969 NARFQ9UHQ1 456 aa27.62■■■□□ 2.01
NFIC-209ENST00000589969 ZBTB1Q9Y2K1 713 aa27.62■■■□□ 2.01
NFIC-209ENST00000589969 ATP10DQ9P241 1426 aa27.61■■■□□ 2.01
NFIC-209ENST00000589969 FCHSD2O94868 740 aa27.61■■■□□ 2.01
NFIC-209ENST00000589969 DPEP1P16444 411 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms