RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ZNF530Q6P9A1 599 aaPredicted RBP24.62■■□□□ 1.53
H3F3B-209ENST00000589949 FLAD1Q8NFF5 587 aa24.62■■□□□ 1.53
H3F3B-209ENST00000589949 ZNF784Q8NCA9 323 aaPredicted RBP24.61■■□□□ 1.53
H3F3B-209ENST00000589949 KDRP35968 1356 aa24.61■■□□□ 1.53
H3F3B-209ENST00000589949 ERVV-2B6SEH9 535 aa24.6■■□□□ 1.53
H3F3B-209ENST00000589949 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
H3F3B-209ENST00000589949 SULT6B1Q6IMI4 303 aa24.6■■□□□ 1.53
H3F3B-209ENST00000589949 DCAF5Q96JK2 942 aa24.6■■□□□ 1.53
H3F3B-209ENST00000589949 YBX3P16989 372 aaKnown RBP eCLIP24.59■■□□□ 1.53
H3F3B-209ENST00000589949 AMOTQ4VCS5 1084 aa24.58■■□□□ 1.53
H3F3B-209ENST00000589949 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.53
H3F3B-209ENST00000589949 CHD4Q14839 1912 aa24.58■■□□□ 1.53
H3F3B-209ENST00000589949 GNPATO15228 680 aa24.57■■□□□ 1.52
H3F3B-209ENST00000589949 HMGB2P26583 209 aaKnown RBP24.57■■□□□ 1.52
H3F3B-209ENST00000589949 SSFA2P28290 1259 aa24.57■■□□□ 1.52
H3F3B-209ENST00000589949 MTHFSP49914 203 aa24.57■■□□□ 1.52
H3F3B-209ENST00000589949 HSP90AB1P08238 724 aaKnown RBP24.55■■□□□ 1.52
H3F3B-209ENST00000589949 CABP4P57796 275 aa24.54■■□□□ 1.52
H3F3B-209ENST00000589949 CC2D1BQ5T0F9 858 aaKnown RBP24.54■■□□□ 1.52
H3F3B-209ENST00000589949 RBM42Q9BTD8 480 aaKnown RBP24.54■■□□□ 1.52
H3F3B-209ENST00000589949 CD2APQ9Y5K6 639 aa24.53■■□□□ 1.52
H3F3B-209ENST00000589949 NFATC2IPQ8NCF5 419 aa24.52■■□□□ 1.52
H3F3B-209ENST00000589949 ZNF831Q5JPB2 1677 aa24.51■■□□□ 1.51
H3F3B-209ENST00000589949 C1orf141Q5JVX7 400 aa24.51■■□□□ 1.51
H3F3B-209ENST00000589949 HMOX1P09601 288 aa24.5■■□□□ 1.51
H3F3B-209ENST00000589949 COL5A3P25940 1745 aaPredicted RBP24.49■■□□□ 1.51
H3F3B-209ENST00000589949 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
H3F3B-209ENST00000589949 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
H3F3B-209ENST00000589949 CNGB1Q14028 1251 aaPredicted RBP24.47■■□□□ 1.51
H3F3B-209ENST00000589949 MYH14Q7Z406 1995 aaKnown RBP24.47■■□□□ 1.51
H3F3B-209ENST00000589949 SCN11AQ9UI33 1791 aa24.47■■□□□ 1.51
H3F3B-209ENST00000589949 CNTNAP4Q9C0A0 1308 aa24.46■■□□□ 1.51
H3F3B-209ENST00000589949 RC3H1Q5TC82 1133 aaKnown RBP24.46■■□□□ 1.51
H3F3B-209ENST00000589949 ARHGEF1Q92888 912 aaKnown RBP24.46■■□□□ 1.51
H3F3B-209ENST00000589949 RTCBQ9Y3I0 505 aaKnown RBP24.46■■□□□ 1.51
H3F3B-209ENST00000589949 WWC3Q9ULE0 1092 aa24.45■■□□□ 1.5
H3F3B-209ENST00000589949 COL3A1P02461 1466 aaPredicted RBP24.45■■□□□ 1.5
H3F3B-209ENST00000589949 MMP10P09238 476 aa24.44■■□□□ 1.5
H3F3B-209ENST00000589949 AKAP4Q5JQC9 854 aa24.44■■□□□ 1.5
H3F3B-209ENST00000589949 TRAPPC3LQ5T215 181 aa24.44■■□□□ 1.5
H3F3B-209ENST00000589949 NPC1L1Q9UHC9 1359 aa24.43■■□□□ 1.5
H3F3B-209ENST00000589949 DIAPH1O60610 1272 aaKnown RBP24.43■■□□□ 1.5
H3F3B-209ENST00000589949 RPS6KA4O75676 772 aa24.43■■□□□ 1.5
H3F3B-209ENST00000589949 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
H3F3B-209ENST00000589949 TJP1Q07157 1748 aa24.42■■□□□ 1.5
H3F3B-209ENST00000589949 GRIN3BO60391 1043 aa24.42■■□□□ 1.5
H3F3B-209ENST00000589949 CRKLP46109 303 aaKnown RBP24.41■■□□□ 1.5
H3F3B-209ENST00000589949 SLC52A2Q9HAB3 445 aa24.41■■□□□ 1.5
H3F3B-209ENST00000589949 RNMTO43148 476 aaKnown RBP24.4■■□□□ 1.5
H3F3B-209ENST00000589949 GYS1P13807 737 aa24.4■■□□□ 1.5
H3F3B-209ENST00000589949 MRC1P22897 1456 aa24.39■■□□□ 1.5
H3F3B-209ENST00000589949 ADRA2BP18089 450 aa24.39■■□□□ 1.49
H3F3B-209ENST00000589949 C4AP0C0L4 1744 aa24.38■■□□□ 1.49
H3F3B-209ENST00000589949 SLC39A6Q13433 755 aa24.38■■□□□ 1.49
H3F3B-209ENST00000589949 INTS5Q6P9B9 1019 aaKnown RBP24.38■■□□□ 1.49
H3F3B-209ENST00000589949 CICQ96RK0 1608 aaPredicted RBP24.38■■□□□ 1.49
H3F3B-209ENST00000589949 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
H3F3B-209ENST00000589949 NLGN1Q8N2Q7 840 aa24.37■■□□□ 1.49
H3F3B-209ENST00000589949 SRP68Q9UHB9 627 aaKnown RBP24.37■■□□□ 1.49
H3F3B-209ENST00000589949 KIAA1551Q9HCM1 1747 aa24.37■■□□□ 1.49
H3F3B-209ENST00000589949 RFC4P35249 363 aa24.36■■□□□ 1.49
H3F3B-209ENST00000589949 DNAJC10Q8IXB1 793 aa24.36■■□□□ 1.49
H3F3B-209ENST00000589949 VIRMAQ69YN4 1812 aaKnown RBP24.35■■□□□ 1.49
H3F3B-209ENST00000589949 PXDNLA1KZ92 1463 aa24.35■■□□□ 1.49
H3F3B-209ENST00000589949 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
H3F3B-209ENST00000589949 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
H3F3B-209ENST00000589949 C10orf71Q711Q0 1435 aa24.34■■□□□ 1.49
H3F3B-209ENST00000589949 U2SURPO15042 1029 aaKnown RBP24.33■■□□□ 1.49
H3F3B-209ENST00000589949 FKBP8Q14318 412 aa24.32■■□□□ 1.48
H3F3B-209ENST00000589949 USP42Q9H9J4 1324 aaKnown RBP24.32■■□□□ 1.48
H3F3B-209ENST00000589949 A0A0G2JLW4 131 aa24.31■■□□□ 1.48
H3F3B-209ENST00000589949 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
H3F3B-209ENST00000589949 C1QTNF8P60827 252 aa24.31■■□□□ 1.48
H3F3B-209ENST00000589949 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
H3F3B-209ENST00000589949 DDR1Q08345 913 aa24.3■■□□□ 1.48
H3F3B-209ENST00000589949 IL17REQ8NFR9 667 aa24.3■■□□□ 1.48
H3F3B-209ENST00000589949 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
H3F3B-209ENST00000589949 ADCY9O60503 1353 aa24.29■■□□□ 1.48
H3F3B-209ENST00000589949 ATP10DQ9P241 1426 aa24.29■■□□□ 1.48
H3F3B-209ENST00000589949 PHACTR3Q96KR7 559 aa24.28■■□□□ 1.48
H3F3B-209ENST00000589949 SOS1Q07889 1333 aaPredicted RBP24.28■■□□□ 1.48
H3F3B-209ENST00000589949 DPEP1P16444 411 aa24.27■■□□□ 1.48
H3F3B-209ENST00000589949 TGFB2P61812 414 aa24.27■■□□□ 1.48
H3F3B-209ENST00000589949 PARP3Q9Y6F1 533 aa24.27■■□□□ 1.48
H3F3B-209ENST00000589949 KCNA3P22001 575 aa24.26■■□□□ 1.47
H3F3B-209ENST00000589949 ZBTB1Q9Y2K1 713 aa24.26■■□□□ 1.47
H3F3B-209ENST00000589949 UBR2Q8IWV8 1755 aa24.26■■□□□ 1.47
H3F3B-209ENST00000589949 GIGYF1O75420 1035 aaPredicted RBP24.25■■□□□ 1.47
H3F3B-209ENST00000589949 RSPH6AQ9H0K4 717 aa24.25■■□□□ 1.47
H3F3B-209ENST00000589949 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
H3F3B-209ENST00000589949 TM4SF1P30408 202 aa24.24■■□□□ 1.47
H3F3B-209ENST00000589949 USPL1Q5W0Q7 1092 aa24.24■■□□□ 1.47
H3F3B-209ENST00000589949 GNAT3A8MTJ3 354 aa24.23■■□□□ 1.47
H3F3B-209ENST00000589949 PRKAR2BP31323 418 aa24.23■■□□□ 1.47
H3F3B-209ENST00000589949 POLRMTO00411 1230 aaKnown RBP24.22■■□□□ 1.47
H3F3B-209ENST00000589949 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
H3F3B-209ENST00000589949 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
H3F3B-209ENST00000589949 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
H3F3B-209ENST00000589949 BCL2L12Q9HB09 334 aa24.22■■□□□ 1.47
H3F3B-209ENST00000589949 BCS1LQ9Y276 419 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms