RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
MBD1-220ENST00000589758 UBR3Q6ZT12 1888 aa19.5■□□□□ 0.71
MBD1-220ENST00000589758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.49■□□□□ 0.71
MBD1-220ENST00000589758 MTHFSP49914 203 aa19.49■□□□□ 0.71
MBD1-220ENST00000589758 CABP4P57796 275 aa19.48■□□□□ 0.71
MBD1-220ENST00000589758 ITPK1Q13572 414 aa19.48■□□□□ 0.71
MBD1-220ENST00000589758 CHD4Q14839 1912 aa19.47■□□□□ 0.71
MBD1-220ENST00000589758 PHF14O94880 888 aa19.47■□□□□ 0.71
MBD1-220ENST00000589758 KDM6AO15550 1401 aaPredicted RBP19.47■□□□□ 0.71
MBD1-220ENST00000589758 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
MBD1-220ENST00000589758 GNPATO15228 680 aa19.46■□□□□ 0.71
MBD1-220ENST00000589758 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
MBD1-220ENST00000589758 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
MBD1-220ENST00000589758 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
MBD1-220ENST00000589758 CD2APQ9Y5K6 639 aa19.46■□□□□ 0.71
MBD1-220ENST00000589758 NPC1L1Q9UHC9 1359 aa19.45■□□□□ 0.7
MBD1-220ENST00000589758 AMIGO3Q86WK7 504 aa19.45■□□□□ 0.7
MBD1-220ENST00000589758 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
MBD1-220ENST00000589758 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
MBD1-220ENST00000589758 AKAP4Q5JQC9 854 aa19.43■□□□□ 0.7
MBD1-220ENST00000589758 RC3H1Q5TC82 1133 aaKnown RBP19.43■□□□□ 0.7
MBD1-220ENST00000589758 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
MBD1-220ENST00000589758 GRIN3BO60391 1043 aa19.42■□□□□ 0.7
MBD1-220ENST00000589758 SMIM5Q71RC9 77 aa19.42■□□□□ 0.7
MBD1-220ENST00000589758 NFATC2IPQ8NCF5 419 aa19.42■□□□□ 0.7
MBD1-220ENST00000589758 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
MBD1-220ENST00000589758 ZNF784Q8NCA9 323 aaPredicted RBP19.41■□□□□ 0.7
MBD1-220ENST00000589758 SLC4A9Q96Q91 983 aa19.41■□□□□ 0.7
MBD1-220ENST00000589758 CNTNAP4Q9C0A0 1308 aa19.41■□□□□ 0.7
MBD1-220ENST00000589758 HMOX1P09601 288 aa19.4■□□□□ 0.7
MBD1-220ENST00000589758 ADRA2BP18089 450 aa19.4■□□□□ 0.7
MBD1-220ENST00000589758 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.7
MBD1-220ENST00000589758 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.69
MBD1-220ENST00000589758 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
MBD1-220ENST00000589758 RPS6KA4O75676 772 aa19.38■□□□□ 0.69
MBD1-220ENST00000589758 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.69
MBD1-220ENST00000589758 NLGN1Q8N2Q7 840 aa19.37■□□□□ 0.69
MBD1-220ENST00000589758 ARHGEF1Q92888 912 aaKnown RBP19.36■□□□□ 0.69
MBD1-220ENST00000589758 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
MBD1-220ENST00000589758 UTRNP46939 3433 aa19.35■□□□□ 0.69
MBD1-220ENST00000589758 RFC4P35249 363 aa19.35■□□□□ 0.69
MBD1-220ENST00000589758 CNGB1Q14028 1251 aaPredicted RBP19.35■□□□□ 0.69
MBD1-220ENST00000589758 MTHFSDQ2M296 383 aaKnown RBP19.35■□□□□ 0.69
MBD1-220ENST00000589758 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
MBD1-220ENST00000589758 LGR6Q9HBX8 967 aa19.34■□□□□ 0.69
MBD1-220ENST00000589758 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.69
MBD1-220ENST00000589758 U2SURPO15042 1029 aaKnown RBP19.33■□□□□ 0.68
MBD1-220ENST00000589758 MMP10P09238 476 aa19.33■□□□□ 0.68
MBD1-220ENST00000589758 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
MBD1-220ENST00000589758 MRC1P22897 1456 aa19.33■□□□□ 0.68
MBD1-220ENST00000589758 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
MBD1-220ENST00000589758 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
MBD1-220ENST00000589758 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
MBD1-220ENST00000589758 VIRMAQ69YN4 1812 aaKnown RBP19.31■□□□□ 0.68
MBD1-220ENST00000589758 GYS1P13807 737 aa19.31■□□□□ 0.68
MBD1-220ENST00000589758 TJP1Q07157 1748 aa19.31■□□□□ 0.68
MBD1-220ENST00000589758 ADAMTS7Q9UKP4 1686 aa19.3■□□□□ 0.68
MBD1-220ENST00000589758 GAS2L2Q8NHY3 880 aa19.29■□□□□ 0.68
MBD1-220ENST00000589758 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
MBD1-220ENST00000589758 C4AP0C0L4 1744 aa19.28■□□□□ 0.68
MBD1-220ENST00000589758 TGFB2P61812 414 aa19.28■□□□□ 0.68
MBD1-220ENST00000589758 INTS5Q6P9B9 1019 aaKnown RBP19.28■□□□□ 0.68
MBD1-220ENST00000589758 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
MBD1-220ENST00000589758 CCDC87Q9NVE4 849 aa19.28■□□□□ 0.68
MBD1-220ENST00000589758 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
MBD1-220ENST00000589758 DNAJC10Q8IXB1 793 aa19.27■□□□□ 0.68
MBD1-220ENST00000589758 NUDCQ9Y266 331 aa19.27■□□□□ 0.68
MBD1-220ENST00000589758 KIF13BQ9NQT8 1826 aa19.27■□□□□ 0.68
MBD1-220ENST00000589758 GNAT3A8MTJ3 354 aa19.26■□□□□ 0.67
MBD1-220ENST00000589758 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
MBD1-220ENST00000589758 TEFQ10587 303 aa19.25■□□□□ 0.67
MBD1-220ENST00000589758 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
MBD1-220ENST00000589758 TTC5Q8N0Z6 440 aa19.24■□□□□ 0.67
MBD1-220ENST00000589758 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
MBD1-220ENST00000589758 C10orf71Q711Q0 1435 aa19.24■□□□□ 0.67
MBD1-220ENST00000589758 ZPR1O75312 459 aa19.23■□□□□ 0.67
MBD1-220ENST00000589758 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
MBD1-220ENST00000589758 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
MBD1-220ENST00000589758 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
MBD1-220ENST00000589758 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
MBD1-220ENST00000589758 PXDNLA1KZ92 1463 aa19.22■□□□□ 0.67
MBD1-220ENST00000589758 FKBP8Q14318 412 aa19.22■□□□□ 0.67
MBD1-220ENST00000589758 RSPH6AQ9H0K4 717 aa19.22■□□□□ 0.67
MBD1-220ENST00000589758 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
MBD1-220ENST00000589758 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
MBD1-220ENST00000589758 PRKAR2BP31323 418 aa19.21■□□□□ 0.67
MBD1-220ENST00000589758 C1QTNF8P60827 252 aa19.21■□□□□ 0.67
MBD1-220ENST00000589758 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
MBD1-220ENST00000589758 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
MBD1-220ENST00000589758 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
MBD1-220ENST00000589758 STARD3NLO95772 234 aa19.2■□□□□ 0.66
MBD1-220ENST00000589758 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
MBD1-220ENST00000589758 TEX13AQ9BXU3 409 aaPredicted RBP19.2■□□□□ 0.66
MBD1-220ENST00000589758 GOLGB1Q14789 3259 aaKnown RBP19.2■□□□□ 0.66
MBD1-220ENST00000589758 N4BP2Q86UW6 1770 aaPredicted RBP19.19■□□□□ 0.66
MBD1-220ENST00000589758 FCHSD2O94868 740 aa19.19■□□□□ 0.66
MBD1-220ENST00000589758 U2AF1L5P0DN76 240 aaPredicted RBP19.19■□□□□ 0.66
MBD1-220ENST00000589758 ZEB1P37275 1124 aaPredicted RBP19.19■□□□□ 0.66
MBD1-220ENST00000589758 U2AF1Q01081 240 aaKnown RBP eCLIP19.19■□□□□ 0.66
MBD1-220ENST00000589758 PHACTR3Q96KR7 559 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms